RNA–Protein interactions for RNA: ENST00000609774.1

LMBR1-221, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-221ENST00000609774 ZNF396Q96N95 335 aaPredicted RBP8.84□□□□□ -0.99
LMBR1-221ENST00000609774 KCNK17Q96T54 332 aa8.84□□□□□ -0.99
LMBR1-221ENST00000609774 GMLQ99445 158 aa8.84□□□□□ -0.99
LMBR1-221ENST00000609774 ARID3AQ99856 593 aa8.84□□□□□ -0.99
LMBR1-221ENST00000609774 KCNF1Q9H3M0 494 aa8.84□□□□□ -0.99
LMBR1-221ENST00000609774 ZBTB3Q9H5J0 574 aa8.84□□□□□ -0.99
LMBR1-221ENST00000609774 CBX8Q9HC52 389 aa8.84□□□□□ -0.99
LMBR1-221ENST00000609774 GGA3Q9NZ52 723 aa8.84□□□□□ -0.99
LMBR1-221ENST00000609774 PODXL2Q9NZ53 605 aa8.84□□□□□ -0.99
LMBR1-221ENST00000609774 DBF4Q9UBU7 674 aaPredicted RBP8.84□□□□□ -0.99
LMBR1-221ENST00000609774 CLIP2Q9UDT6 1046 aa8.84□□□□□ -0.99
LMBR1-221ENST00000609774 CEP290O15078 2479 aa8.83□□□□□ -1
LMBR1-221ENST00000609774 UNCXA6NJT0 531 aa8.83□□□□□ -1
LMBR1-221ENST00000609774 BECN2A8MW95 431 aa8.83□□□□□ -1
LMBR1-221ENST00000609774 FKTNO75072 461 aa8.83□□□□□ -1
LMBR1-221ENST00000609774 ALDH1A1P00352 501 aa8.83□□□□□ -1
LMBR1-221ENST00000609774 INHBEP58166 350 aa8.83□□□□□ -1
LMBR1-221ENST00000609774 PTPN14Q15678 1187 aa8.83□□□□□ -1
LMBR1-221ENST00000609774 ME3Q16798 604 aa8.83□□□□□ -1
LMBR1-221ENST00000609774 CEP135Q66GS9 1140 aa8.83□□□□□ -1
LMBR1-221ENST00000609774 CCDC73Q6ZRK6 1079 aa8.83□□□□□ -1
LMBR1-221ENST00000609774 ZNF771Q7L3S4 317 aaPredicted RBP8.83□□□□□ -1
LMBR1-221ENST00000609774 TTC6Q86TZ1 520 aa8.83□□□□□ -1
LMBR1-221ENST00000609774 ZNF397Q8NF99 534 aaPredicted RBP8.83□□□□□ -1
LMBR1-221ENST00000609774 LEO1Q8WVC0 666 aaPredicted RBP8.83□□□□□ -1
LMBR1-221ENST00000609774 ARMC5Q96C12 935 aa8.83□□□□□ -1
LMBR1-221ENST00000609774 EYA3Q99504 573 aa8.83□□□□□ -1
LMBR1-221ENST00000609774 ANO10Q9NW15 660 aa8.83□□□□□ -1
LMBR1-221ENST00000609774 DACT1Q9NYF0 836 aa8.83□□□□□ -1
LMBR1-221ENST00000609774 IMPACTQ9P2X3 320 aa8.83□□□□□ -1
LMBR1-221ENST00000609774 POLLQ9UGP5 575 aa8.83□□□□□ -1
LMBR1-221ENST00000609774 SH3TC1Q8TE82 1336 aa8.82□□□□□ -1
LMBR1-221ENST00000609774 TRIOBPQ9H2D6 2365 aa8.82□□□□□ -1
LMBR1-221ENST00000609774 SLC27A2O14975 620 aa8.82□□□□□ -1
LMBR1-221ENST00000609774 ECE2O60344 883 aa8.82□□□□□ -1
LMBR1-221ENST00000609774 TBC1D8O95759 1140 aa8.82□□□□□ -1
LMBR1-221ENST00000609774 SREBF2Q12772 1141 aa8.82□□□□□ -1
LMBR1-221ENST00000609774 TCIRG1Q13488 830 aa8.82□□□□□ -1
LMBR1-221ENST00000609774 SLFNL1Q499Z3 407 aa8.82□□□□□ -1
LMBR1-221ENST00000609774 NAA16Q6N069 864 aaPredicted RBP8.82□□□□□ -1
LMBR1-221ENST00000609774 AACSQ86V21 672 aa8.82□□□□□ -1
LMBR1-221ENST00000609774 CEP57L1Q8IYX8 460 aa8.82□□□□□ -1
LMBR1-221ENST00000609774 KRT222Q8N1A0 295 aa8.82□□□□□ -1
LMBR1-221ENST00000609774 KIF18AQ8NI77 898 aa8.82□□□□□ -1
LMBR1-221ENST00000609774 OXER1Q8TDS5 423 aa8.82□□□□□ -1
LMBR1-221ENST00000609774 KCTD12Q96CX2 325 aaKnown RBP8.82□□□□□ -1
LMBR1-221ENST00000609774 ERO1AQ96HE7 468 aa8.82□□□□□ -1
LMBR1-221ENST00000609774 FSD1Q9BTV5 496 aa8.82□□□□□ -1
LMBR1-221ENST00000609774 KCND1Q9NSA2 647 aa8.82□□□□□ -1
LMBR1-221ENST00000609774 HCSTQ9UBK5 93 aa8.82□□□□□ -1
LMBR1-221ENST00000609774 TPCN1Q9ULQ1 816 aa8.82□□□□□ -1
LMBR1-221ENST00000609774 ZNF646O15015 1829 aaPredicted RBP8.82□□□□□ -1
LMBR1-221ENST00000609774 PI4KAP2A4QPH2 592 aa8.81□□□□□ -1
LMBR1-221ENST00000609774 KINO60870 393 aaKnown RBP8.81□□□□□ -1
LMBR1-221ENST00000609774 LARGE1O95461 756 aa8.81□□□□□ -1
LMBR1-221ENST00000609774 MYL6BP14649 208 aa8.81□□□□□ -1
LMBR1-221ENST00000609774 LIG1P18858 919 aa8.81□□□□□ -1
LMBR1-221ENST00000609774 PTH1RQ03431 593 aa8.81□□□□□ -1
LMBR1-221ENST00000609774 SCARF1Q14162 830 aa8.81□□□□□ -1
LMBR1-221ENST00000609774 ATP2B3Q16720 1220 aa8.81□□□□□ -1
LMBR1-221ENST00000609774 TPRNQ4KMQ1 711 aa8.81□□□□□ -1
LMBR1-221ENST00000609774 LDLRAD1Q5T700 205 aa8.81□□□□□ -1
LMBR1-221ENST00000609774 ANGEL2Q5VTE6 544 aaKnown RBP8.81□□□□□ -1
LMBR1-221ENST00000609774 KSR2Q6VAB6 950 aa8.81□□□□□ -1
LMBR1-221ENST00000609774 LUZP1Q86V48 1076 aa8.81□□□□□ -1
LMBR1-221ENST00000609774 C17orf53Q8N3J3 647 aaPredicted RBP8.81□□□□□ -1
LMBR1-221ENST00000609774 PI4KAP1Q8N8J0 262 aa8.81□□□□□ -1
LMBR1-221ENST00000609774 CCDC150Q8NCX0 1101 aa8.81□□□□□ -1
LMBR1-221ENST00000609774 TBC1D16Q8TBP0 767 aa8.81□□□□□ -1
LMBR1-221ENST00000609774 IL25Q9H293 177 aa8.81□□□□□ -1
LMBR1-221ENST00000609774 DBNDD1Q9H9R9 158 aa8.81□□□□□ -1
LMBR1-221ENST00000609774 KCNQ5Q9NR82 932 aa8.81□□□□□ -1
LMBR1-221ENST00000609774 MORC2Q9Y6X9 1032 aaPredicted RBP8.81□□□□□ -1
LMBR1-221ENST00000609774 CUL9Q8IWT3 2517 aa8.81□□□□□ -1
LMBR1-221ENST00000609774 ASTN2O75129 1339 aaPredicted RBP8.8□□□□□ -1
LMBR1-221ENST00000609774 TK2O00142 265 aa8.8□□□□□ -1
LMBR1-221ENST00000609774 TPM1P09493 284 aa8.8□□□□□ -1
LMBR1-221ENST00000609774 NBPF7P0C2Y1 421 aaPredicted RBP8.8□□□□□ -1
LMBR1-221ENST00000609774 HSP90B1P14625 803 aaKnown RBP8.8□□□□□ -1
LMBR1-221ENST00000609774 EIF2S2P20042 333 aaKnown RBP8.8□□□□□ -1
LMBR1-221ENST00000609774 U2AF2P26368 475 aaKnown RBP eCLIP8.8□□□□□ -1
LMBR1-221ENST00000609774 KCNJ6P48051 423 aa8.8□□□□□ -1
LMBR1-221ENST00000609774 FGD1P98174 961 aa8.8□□□□□ -1
LMBR1-221ENST00000609774 NCBP1Q09161 790 aaKnown RBP8.8□□□□□ -1
LMBR1-221ENST00000609774 NEXNQ0ZGT2 675 aa8.8□□□□□ -1
LMBR1-221ENST00000609774 TRIM28Q13263 835 aaKnown RBP8.8□□□□□ -1
LMBR1-221ENST00000609774 NMIQ13287 307 aaPredicted RBP8.8□□□□□ -1
LMBR1-221ENST00000609774 CAMK4Q16566 473 aa8.8□□□□□ -1
LMBR1-221ENST00000609774 RSBN1LQ6PCB5 846 aaPredicted RBP8.8□□□□□ -1
LMBR1-221ENST00000609774 LRRC8AQ8IWT6 810 aa8.8□□□□□ -1
LMBR1-221ENST00000609774 NECAB1Q8N987 351 aa8.8□□□□□ -1
LMBR1-221ENST00000609774 LINS1Q8NG48 757 aa8.8□□□□□ -1
LMBR1-221ENST00000609774 C16orf45Q96MC5 204 aaPredicted RBP8.8□□□□□ -1
LMBR1-221ENST00000609774 PHAXQ9H814 394 aaKnown RBP8.8□□□□□ -1
LMBR1-221ENST00000609774 CTNNA3Q9UI47 895 aa8.8□□□□□ -1
LMBR1-221ENST00000609774 DDX41Q9UJV9 622 aaKnown RBP8.8□□□□□ -1
LMBR1-221ENST00000609774 ZHX1Q9UKY1 873 aaPredicted RBP8.8□□□□□ -1
LMBR1-221ENST00000609774 COL4A1P02462 1669 aa8.79□□□□□ -1
LMBR1-221ENST00000609774 COL1A1P02452 1464 aaPredicted RBP8.79□□□□□ -1
LMBR1-221ENST00000609774 AP5Z1O43299 807 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms