RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 PPARAQ07869 468 aa16.98■□□□□ 0.31
CTSA-219ENST00000607841 ABCB5Q2M3G0 1257 aa16.98■□□□□ 0.31
CTSA-219ENST00000607841 CNKSR2Q8WXI2 1034 aa16.98■□□□□ 0.31
CTSA-219ENST00000607841 CCDC17Q96LX7 622 aa16.98■□□□□ 0.31
CTSA-219ENST00000607841 AS3MTQ9HBK9 375 aa16.98■□□□□ 0.31
CTSA-219ENST00000607841 CTNNA3Q9UI47 895 aa16.98■□□□□ 0.31
CTSA-219ENST00000607841 USP17L5A8MUK1 530 aa16.97■□□□□ 0.31
CTSA-219ENST00000607841 CXCL11O14625 94 aa16.97■□□□□ 0.31
CTSA-219ENST00000607841 IRF6O14896 467 aa16.97■□□□□ 0.31
CTSA-219ENST00000607841 SGSM2O43147 1006 aa16.97■□□□□ 0.31
CTSA-219ENST00000607841 CDC45O75419 566 aa16.97■□□□□ 0.31
CTSA-219ENST00000607841 GDF11O95390 407 aa16.97■□□□□ 0.31
CTSA-219ENST00000607841 GJA5P36382 358 aa16.97■□□□□ 0.31
CTSA-219ENST00000607841 EVX2Q03828 476 aa16.97■□□□□ 0.31
CTSA-219ENST00000607841 SNAPC2Q13487 334 aa16.97■□□□□ 0.31
CTSA-219ENST00000607841 RRP1BQ14684 758 aaKnown RBP16.97■□□□□ 0.31
CTSA-219ENST00000607841 KIAA1211Q6ZU35 1233 aa16.97■□□□□ 0.31
CTSA-219ENST00000607841 BEGAINQ9BUH8 593 aa16.97■□□□□ 0.31
CTSA-219ENST00000607841 ZBTB21Q9ULJ3 1066 aa16.97■□□□□ 0.31
CTSA-219ENST00000607841 ROBO3Q96MS0 1386 aa16.97■□□□□ 0.31
CTSA-219ENST00000607841 NAV1Q8NEY1 1877 aa16.97■□□□□ 0.31
CTSA-219ENST00000607841 CDK5RAP2Q96SN8 1893 aa16.97■□□□□ 0.31
CTSA-219ENST00000607841 MPHOSPH10O00566 681 aaKnown RBP16.96■□□□□ 0.31
CTSA-219ENST00000607841 CAPN15O75808 1086 aa16.96■□□□□ 0.31
CTSA-219ENST00000607841 GH2P01242 217 aa16.96■□□□□ 0.31
CTSA-219ENST00000607841 TM4SF4P48230 202 aa16.96■□□□□ 0.31
CTSA-219ENST00000607841 ZNF444Q8N0Y2 327 aaPredicted RBP16.96■□□□□ 0.31
CTSA-219ENST00000607841 SLC44A5Q8NCS7 719 aa16.96■□□□□ 0.31
CTSA-219ENST00000607841 ANAPC4Q9UJX5 808 aa16.96■□□□□ 0.31
CTSA-219ENST00000607841 DDX60LQ5H9U9 1706 aaKnown RBP16.96■□□□□ 0.3
CTSA-219ENST00000607841 ZNF213O14771 459 aa16.95■□□□□ 0.3
CTSA-219ENST00000607841 CETPP11597 493 aa16.95■□□□□ 0.3
CTSA-219ENST00000607841 OTUD7BQ6GQQ9 843 aa16.95■□□□□ 0.3
CTSA-219ENST00000607841 TMEM179Q6ZVK1 233 aa16.95■□□□□ 0.3
CTSA-219ENST00000607841 STK11IPQ8N1F8 1099 aa16.95■□□□□ 0.3
CTSA-219ENST00000607841 ZNF280CQ8ND82 737 aa16.95■□□□□ 0.3
CTSA-219ENST00000607841 ZIC5Q96T25 663 aa16.95■□□□□ 0.3
CTSA-219ENST00000607841 KCNH4Q9UQ05 1017 aa16.95■□□□□ 0.3
CTSA-219ENST00000607841 AFG3L2Q9Y4W6 797 aa16.95■□□□□ 0.3
CTSA-219ENST00000607841 MYH1P12882 1939 aa16.95■□□□□ 0.3
CTSA-219ENST00000607841 TESPA1A2RU30 521 aaPredicted RBP16.94■□□□□ 0.3
CTSA-219ENST00000607841 SMIM22K7EJ46 135 aa16.94■□□□□ 0.3
CTSA-219ENST00000607841 PCP11498 1178 aaKnown RBP16.94■□□□□ 0.3
CTSA-219ENST00000607841 RAB3GAP1Q15042 981 aa16.94■□□□□ 0.3
CTSA-219ENST00000607841 IMMTQ16891 758 aaKnown RBP16.94■□□□□ 0.3
CTSA-219ENST00000607841 MS4A4AQ96JQ5 239 aa16.94■□□□□ 0.3
CTSA-219ENST00000607841 ESYT1Q9BSJ8 1104 aa16.94■□□□□ 0.3
CTSA-219ENST00000607841 WDR18Q9BV38 432 aa16.94■□□□□ 0.3
CTSA-219ENST00000607841 IL25Q9H293 177 aa16.94■□□□□ 0.3
CTSA-219ENST00000607841 CCL15-CCL14A0A0B4J2E2 113 aa16.93■□□□□ 0.3
CTSA-219ENST00000607841 TRIM75PA6NK02 468 aa16.93■□□□□ 0.3
CTSA-219ENST00000607841 CA12O43570 354 aa16.93■□□□□ 0.3
CTSA-219ENST00000607841 ALDH1A1P00352 501 aa16.93■□□□□ 0.3
CTSA-219ENST00000607841 JAG1P78504 1218 aa16.93■□□□□ 0.3
CTSA-219ENST00000607841 SPP2Q13103 211 aa16.93■□□□□ 0.3
CTSA-219ENST00000607841 CCL15Q16663 113 aa16.93■□□□□ 0.3
CTSA-219ENST00000607841 FASTKD5Q7L8L6 764 aaKnown RBP16.93■□□□□ 0.3
CTSA-219ENST00000607841 RNF41Q9H4P4 317 aaPredicted RBP16.93■□□□□ 0.3
CTSA-219ENST00000607841 WBP1LQ9NX94 342 aa16.93■□□□□ 0.3
CTSA-219ENST00000607841 U3KPZ7 1027 aaPredicted RBP16.93■□□□□ 0.3
CTSA-219ENST00000607841 PCNTO95613 3336 aa16.93■□□□□ 0.3
CTSA-219ENST00000607841 SIPA1L1O43166 1804 aa16.92■□□□□ 0.3
CTSA-219ENST00000607841 AKR1B1P15121 316 aa16.92■□□□□ 0.3
CTSA-219ENST00000607841 RASA1P20936 1047 aa16.92■□□□□ 0.3
CTSA-219ENST00000607841 NT5C2P49902 561 aa16.92■□□□□ 0.3
CTSA-219ENST00000607841 CTDSPL2Q05D32 466 aa16.92■□□□□ 0.3
CTSA-219ENST00000607841 CCDC84Q86UT8 332 aaPredicted RBP16.92■□□□□ 0.3
CTSA-219ENST00000607841 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.92■□□□□ 0.3
CTSA-219ENST00000607841 OTOFQ9HC10 1997 aa16.91■□□□□ 0.3
CTSA-219ENST00000607841 A0A0G2JLL6 359 aaPredicted RBP16.91■□□□□ 0.3
CTSA-219ENST00000607841 C19orf81C9J6K1 198 aa16.91■□□□□ 0.3
CTSA-219ENST00000607841 USP17L10C9JJH3 530 aa16.91■□□□□ 0.3
CTSA-219ENST00000607841 PRDM1O75626 825 aa16.91■□□□□ 0.3
CTSA-219ENST00000607841 HAND2P61296 217 aa16.91■□□□□ 0.3
CTSA-219ENST00000607841 SEPT2Q15019 361 aa16.91■□□□□ 0.3
CTSA-219ENST00000607841 SHROOM1Q2M3G4 852 aaPredicted RBP16.91■□□□□ 0.3
CTSA-219ENST00000607841 MFSD6Q6ZSS7 791 aa16.91■□□□□ 0.3
CTSA-219ENST00000607841 PRRT2Q7Z6L0 340 aaPredicted RBP16.91■□□□□ 0.3
CTSA-219ENST00000607841 IFNL1Q8IU54 200 aa16.91■□□□□ 0.3
CTSA-219ENST00000607841 BRI3BPQ8WY22 251 aa16.91■□□□□ 0.3
CTSA-219ENST00000607841 MAP4K1Q92918 833 aa16.91■□□□□ 0.3
CTSA-219ENST00000607841 KANSL2Q9H9L4 492 aa16.91■□□□□ 0.3
CTSA-219ENST00000607841 ANO2Q9NQ90 1003 aa16.91■□□□□ 0.3
CTSA-219ENST00000607841 SAGE1Q9NXZ1 904 aa16.91■□□□□ 0.3
CTSA-219ENST00000607841 THSD7BQ9C0I4 1608 aa16.9■□□□□ 0.3
CTSA-219ENST00000607841 ORC4O43929 436 aa16.9■□□□□ 0.3
CTSA-219ENST00000607841 FGRP09769 529 aa16.9■□□□□ 0.3
CTSA-219ENST00000607841 TSPY3P0CV98 308 aa16.9■□□□□ 0.3
CTSA-219ENST00000607841 TSPY8P0CW00 308 aa16.9■□□□□ 0.3
CTSA-219ENST00000607841 BACE1P56817 501 aa16.9■□□□□ 0.3
CTSA-219ENST00000607841 PTH1RQ03431 593 aa16.9■□□□□ 0.3
CTSA-219ENST00000607841 AKNAD1Q5T1N1 836 aa16.9■□□□□ 0.3
CTSA-219ENST00000607841 COL13A1Q5TAT6 717 aaPredicted RBP16.9■□□□□ 0.3
CTSA-219ENST00000607841 STAG1Q8WVM7 1258 aa16.9■□□□□ 0.3
CTSA-219ENST00000607841 FEZ1Q99689 392 aa16.9■□□□□ 0.3
CTSA-219ENST00000607841 ARHGEF10LQ9HCE6 1279 aa16.9■□□□□ 0.3
CTSA-219ENST00000607841 ZCCHC17Q9NP64 241 aaKnown RBP16.9■□□□□ 0.3
CTSA-219ENST00000607841 TOMM22Q9NS69 142 aa16.9■□□□□ 0.3
CTSA-219ENST00000607841 TMOD4Q9NZQ9 345 aa16.9■□□□□ 0.3
CTSA-219ENST00000607841 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms