RNA–Protein interactions for RNA: ENST00000607049.5

PKNOX1-210, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-210ENST00000607049 TTC41PQ6P2S7 1318 aa17.36■□□□□ 0.37
PKNOX1-210ENST00000607049 MBD4O95243 580 aa17.35■□□□□ 0.37
PKNOX1-210ENST00000607049 ZFYP08048 801 aaPredicted RBP17.35■□□□□ 0.37
PKNOX1-210ENST00000607049 MTMR2Q13614 643 aa17.35■□□□□ 0.37
PKNOX1-210ENST00000607049 TATDN1Q6P1N9 297 aa17.35■□□□□ 0.37
PKNOX1-210ENST00000607049 LCORLQ8N3X6 602 aa17.35■□□□□ 0.37
PKNOX1-210ENST00000607049 GCC1Q96CN9 775 aa17.35■□□□□ 0.37
PKNOX1-210ENST00000607049 DNAJC18Q9H819 358 aa17.35■□□□□ 0.37
PKNOX1-210ENST00000607049 ARMT1Q9H993 441 aa17.35■□□□□ 0.37
PKNOX1-210ENST00000607049 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.35■□□□□ 0.37
PKNOX1-210ENST00000607049 GH2P01242 217 aa17.34■□□□□ 0.37
PKNOX1-210ENST00000607049 GCLCP48506 637 aaPredicted RBP17.34■□□□□ 0.37
PKNOX1-210ENST00000607049 IRX3P78415 501 aaPredicted RBP17.34■□□□□ 0.37
PKNOX1-210ENST00000607049 RRP1BQ14684 758 aaKnown RBP17.34■□□□□ 0.37
PKNOX1-210ENST00000607049 ABCB5Q2M3G0 1257 aa17.34■□□□□ 0.37
PKNOX1-210ENST00000607049 SH3D19Q5HYK7 790 aa17.34■□□□□ 0.37
PKNOX1-210ENST00000607049 FEZ1Q99689 392 aa17.34■□□□□ 0.37
PKNOX1-210ENST00000607049 TMEM106CQ9BVX2 250 aa17.34■□□□□ 0.37
PKNOX1-210ENST00000607049 SWAP70Q9UH65 585 aa17.34■□□□□ 0.37
PKNOX1-210ENST00000607049 ADGRA2Q96PE1 1338 aa17.33■□□□□ 0.36
PKNOX1-210ENST00000607049 GLRX3O76003 335 aaKnown RBP17.33■□□□□ 0.36
PKNOX1-210ENST00000607049 BCRP11274 1271 aa17.33■□□□□ 0.36
PKNOX1-210ENST00000607049 USP14P54578 494 aa17.33■□□□□ 0.36
PKNOX1-210ENST00000607049 RAB3GAP1Q15042 981 aa17.33■□□□□ 0.36
PKNOX1-210ENST00000607049 KBTBD3Q8NAB2 608 aa17.33■□□□□ 0.36
PKNOX1-210ENST00000607049 RAET1EQ8TD07 263 aa17.33■□□□□ 0.36
PKNOX1-210ENST00000607049 SDR42E1Q8WUS8 393 aa17.33■□□□□ 0.36
PKNOX1-210ENST00000607049 DCP1AQ9NPI6 582 aaPredicted RBP17.33■□□□□ 0.36
PKNOX1-210ENST00000607049 ECM2O94769 699 aaPredicted RBP17.32■□□□□ 0.36
PKNOX1-210ENST00000607049 PLCD1P51178 756 aa17.32■□□□□ 0.36
PKNOX1-210ENST00000607049 HDAC1Q13547 482 aaPredicted RBP17.32■□□□□ 0.36
PKNOX1-210ENST00000607049 TREML2Q5T2D2 321 aa17.32■□□□□ 0.36
PKNOX1-210ENST00000607049 ANKRD45Q5TZF3 282 aa17.32■□□□□ 0.36
PKNOX1-210ENST00000607049 USP17L2Q6R6M4 530 aa17.32■□□□□ 0.36
PKNOX1-210ENST00000607049 ARMC5Q96C12 935 aa17.32■□□□□ 0.36
PKNOX1-210ENST00000607049 ARHGAP39Q9C0H5 1083 aa17.32■□□□□ 0.36
PKNOX1-210ENST00000607049 RWDD1Q9H446 243 aaPredicted RBP17.32■□□□□ 0.36
PKNOX1-210ENST00000607049 SRRDQ9UH36 339 aa17.32■□□□□ 0.36
PKNOX1-210ENST00000607049 PTCH2Q9Y6C5 1203 aa17.32■□□□□ 0.36
PKNOX1-210ENST00000607049 SLC4A4Q9Y6R1 1079 aa17.32■□□□□ 0.36
PKNOX1-210ENST00000607049 MYO5AQ9Y4I1 1855 aaKnown RBP17.31■□□□□ 0.36
PKNOX1-210ENST00000607049 MPHOSPH10O00566 681 aaKnown RBP17.31■□□□□ 0.36
PKNOX1-210ENST00000607049 TNPO2O14787 897 aaKnown RBP17.31■□□□□ 0.36
PKNOX1-210ENST00000607049 MX1P20591 662 aa17.31■□□□□ 0.36
PKNOX1-210ENST00000607049 ANKRD13CQ8N6S4 541 aa17.31■□□□□ 0.36
PKNOX1-210ENST00000607049 GTF3C2Q8WUA4 911 aaPredicted RBP17.31■□□□□ 0.36
PKNOX1-210ENST00000607049 COA7Q96BR5 231 aa17.31■□□□□ 0.36
PKNOX1-210ENST00000607049 TRIM47Q96LD4 638 aa17.31■□□□□ 0.36
PKNOX1-210ENST00000607049 MYPNQ86TC9 1320 aa17.3■□□□□ 0.36
PKNOX1-210ENST00000607049 RNF113AO15541 343 aaKnown RBP17.3■□□□□ 0.36
PKNOX1-210ENST00000607049 GNAT2P19087 354 aa17.3■□□□□ 0.36
PKNOX1-210ENST00000607049 FAM110CQ1W6H9 321 aa17.3■□□□□ 0.36
PKNOX1-210ENST00000607049 APPBP2Q92624 585 aa17.3■□□□□ 0.36
PKNOX1-210ENST00000607049 ASCC2Q9H1I8 757 aaPredicted RBP17.3■□□□□ 0.36
PKNOX1-210ENST00000607049 FOCADQ5VW36 1801 aa17.3■□□□□ 0.36
PKNOX1-210ENST00000607049 HOXA7P31268 230 aaPredicted RBP17.29■□□□□ 0.36
PKNOX1-210ENST00000607049 SHMT1P34896 483 aa17.29■□□□□ 0.36
PKNOX1-210ENST00000607049 TSHZ3Q63HK5 1081 aa17.29■□□□□ 0.36
PKNOX1-210ENST00000607049 CCAR1Q8IX12 1150 aaKnown RBP17.29■□□□□ 0.36
PKNOX1-210ENST00000607049 FSD1Q9BTV5 496 aa17.29■□□□□ 0.36
PKNOX1-210ENST00000607049 ARPP21Q9UBL0 812 aaPredicted RBP17.29■□□□□ 0.36
PKNOX1-210ENST00000607049 BIN2Q9UBW5 565 aaPredicted RBP17.29■□□□□ 0.36
PKNOX1-210ENST00000607049 USP17L12C9JPN9 530 aa17.28■□□□□ 0.36
PKNOX1-210ENST00000607049 USP17L21D6R901 530 aa17.28■□□□□ 0.36
PKNOX1-210ENST00000607049 PRKAB2O43741 272 aa17.28■□□□□ 0.36
PKNOX1-210ENST00000607049 JAG1P78504 1218 aa17.28■□□□□ 0.36
PKNOX1-210ENST00000607049 GABPAQ06546 454 aa17.28■□□□□ 0.36
PKNOX1-210ENST00000607049 TMEM179Q6ZVK1 233 aa17.28■□□□□ 0.36
PKNOX1-210ENST00000607049 ZNF333Q96JL9 665 aa17.28■□□□□ 0.36
PKNOX1-210ENST00000607049 CCDC17Q96LX7 622 aa17.28■□□□□ 0.36
PKNOX1-210ENST00000607049 KIAA1683Q9H0B3 1180 aa17.28■□□□□ 0.36
PKNOX1-210ENST00000607049 PUS7LQ9H0K6 701 aaKnown RBP17.28■□□□□ 0.36
PKNOX1-210ENST00000607049 SH2D4AQ9H788 454 aa17.28■□□□□ 0.36
PKNOX1-210ENST00000607049 MYH1P12882 1939 aa17.27■□□□□ 0.36
PKNOX1-210ENST00000607049 APPP05067 770 aa17.27■□□□□ 0.36
PKNOX1-210ENST00000607049 GRK4P32298 578 aa17.27■□□□□ 0.36
PKNOX1-210ENST00000607049 UBXN2AP68543 259 aa17.27■□□□□ 0.36
PKNOX1-210ENST00000607049 CAP1Q01518 475 aa17.27■□□□□ 0.36
PKNOX1-210ENST00000607049 ZYXQ15942 572 aaKnown RBP17.27■□□□□ 0.36
PKNOX1-210ENST00000607049 SLFNL1Q499Z3 407 aa17.27■□□□□ 0.36
PKNOX1-210ENST00000607049 C12orf60Q5U649 245 aa17.27■□□□□ 0.36
PKNOX1-210ENST00000607049 GIMAP6Q6P9H5 292 aa17.27■□□□□ 0.36
PKNOX1-210ENST00000607049 STRBPQ96SI9 672 aaKnown RBP17.27■□□□□ 0.36
PKNOX1-210ENST00000607049 NACAP1Q9BZK3 213 aa17.27■□□□□ 0.36
PKNOX1-210ENST00000607049 ZNF287Q9HBT7 754 aa17.27■□□□□ 0.36
PKNOX1-210ENST00000607049 CDK5RAP2Q96SN8 1893 aa17.27■□□□□ 0.35
PKNOX1-210ENST00000607049 USP17L15C9J2P7 530 aa17.26■□□□□ 0.35
PKNOX1-210ENST00000607049 USP17L13C9JLJ4 530 aa17.26■□□□□ 0.35
PKNOX1-210ENST00000607049 USP17L11C9JVI0 530 aa17.26■□□□□ 0.35
PKNOX1-210ENST00000607049 USP17L18D6R9N7 530 aa17.26■□□□□ 0.35
PKNOX1-210ENST00000607049 USP17L22D6RA61 530 aa17.26■□□□□ 0.35
PKNOX1-210ENST00000607049 USP17L17D6RBQ6 530 aa17.26■□□□□ 0.35
PKNOX1-210ENST00000607049 USP17L19D6RCP7 530 aa17.26■□□□□ 0.35
PKNOX1-210ENST00000607049 USP17L20D6RJB6 530 aa17.26■□□□□ 0.35
PKNOX1-210ENST00000607049 USP17L24Q0WX57 530 aa17.26■□□□□ 0.35
PKNOX1-210ENST00000607049 SLAIN1Q8ND83 568 aa17.26■□□□□ 0.35
PKNOX1-210ENST00000607049 GPRC5AQ8NFJ5 357 aa17.26■□□□□ 0.35
PKNOX1-210ENST00000607049 SH3TC2Q8TF17 1288 aa17.26■□□□□ 0.35
PKNOX1-210ENST00000607049 C12orf42Q96LP6 360 aa17.26■□□□□ 0.35
PKNOX1-210ENST00000607049 ARHGEF10LQ9HCE6 1279 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms