RNA–Protein interactions for RNA: ENST00000606394.5

CTSA-212, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-212ENST00000606394 DHX36Q9H2U1 1008 aaKnown RBP16.48■□□□□ 0.23
CTSA-212ENST00000606394 PI4KBQ9UBF8 816 aa16.48■□□□□ 0.23
CTSA-212ENST00000606394 MDM2Q00987 491 aaPredicted RBP16.47■□□□□ 0.23
CTSA-212ENST00000606394 MTMR2Q13614 643 aa16.47■□□□□ 0.23
CTSA-212ENST00000606394 CCAR1Q8IX12 1150 aaKnown RBP16.47■□□□□ 0.23
CTSA-212ENST00000606394 ZNF384Q8TF68 577 aa16.47■□□□□ 0.23
CTSA-212ENST00000606394 NSUN4Q96CB9 384 aaKnown RBP16.47■□□□□ 0.23
CTSA-212ENST00000606394 APBA2Q99767 749 aa16.47■□□□□ 0.23
CTSA-212ENST00000606394 TXNRD2Q9NNW7 524 aa16.47■□□□□ 0.23
CTSA-212ENST00000606394 MSCO60682 206 aa16.46■□□□□ 0.23
CTSA-212ENST00000606394 TIMM10P62072 90 aa16.46■□□□□ 0.23
CTSA-212ENST00000606394 ERVK-9P63128 1117 aa16.46■□□□□ 0.23
CTSA-212ENST00000606394 ERVK-24P63145 666 aa16.46■□□□□ 0.23
CTSA-212ENST00000606394 RRP1BQ14684 758 aaKnown RBP16.46■□□□□ 0.23
CTSA-212ENST00000606394 ALDH1L2Q3SY69 923 aa16.46■□□□□ 0.23
CTSA-212ENST00000606394 MORN1Q5T089 497 aa16.46■□□□□ 0.23
CTSA-212ENST00000606394 XAGE2Q96GT9 111 aa16.46■□□□□ 0.23
CTSA-212ENST00000606394 RBPJLQ9UBG7 517 aa16.46■□□□□ 0.23
CTSA-212ENST00000606394 A0A1B0GUL7 405 aa16.45■□□□□ 0.22
CTSA-212ENST00000606394 USP17L10C9JJH3 530 aa16.45■□□□□ 0.22
CTSA-212ENST00000606394 CCND3P30281 292 aaPredicted RBP16.45■□□□□ 0.22
CTSA-212ENST00000606394 ZNF697Q5TEC3 545 aa16.45■□□□□ 0.22
CTSA-212ENST00000606394 GPR142Q7Z601 462 aa16.45■□□□□ 0.22
CTSA-212ENST00000606394 PLEKHH3Q7Z736 793 aa16.45■□□□□ 0.22
CTSA-212ENST00000606394 PA2G4Q9UQ80 394 aaKnown RBP16.45■□□□□ 0.22
CTSA-212ENST00000606394 CDH23Q9H251 3354 aa16.45■□□□□ 0.22
CTSA-212ENST00000606394 GLRX3O76003 335 aaKnown RBP16.44■□□□□ 0.22
CTSA-212ENST00000606394 METTL16Q86W50 562 aaKnown RBP16.44■□□□□ 0.22
CTSA-212ENST00000606394 TEX11Q8IYF3 940 aa16.44■□□□□ 0.22
CTSA-212ENST00000606394 SPATA5Q8NB90 893 aa16.44■□□□□ 0.22
CTSA-212ENST00000606394 PRKAG2Q9UGJ0 569 aa16.44■□□□□ 0.22
CTSA-212ENST00000606394 MUC3AQ02505 3323 aa16.43■□□□□ 0.22
CTSA-212ENST00000606394 E9PSI1 815 aa16.43■□□□□ 0.22
CTSA-212ENST00000606394 PLCG2P16885 1265 aa16.43■□□□□ 0.22
CTSA-212ENST00000606394 MAP2K5Q13163 448 aa16.43■□□□□ 0.22
CTSA-212ENST00000606394 MFSD14CQ5VZR4 134 aa16.43■□□□□ 0.22
CTSA-212ENST00000606394 FOXP4Q8IVH2 680 aaPredicted RBP16.43■□□□□ 0.22
CTSA-212ENST00000606394 NOL10Q9BSC4 688 aaKnown RBP16.43■□□□□ 0.22
CTSA-212ENST00000606394 SENP6Q9GZR1 1112 aaPredicted RBP16.43■□□□□ 0.22
CTSA-212ENST00000606394 PORCNQ9H237 461 aa16.43■□□□□ 0.22
CTSA-212ENST00000606394 HMG20BQ9P0W2 317 aa16.43■□□□□ 0.22
CTSA-212ENST00000606394 MAST2Q6P0Q8 1798 aa16.43■□□□□ 0.22
CTSA-212ENST00000606394 BAG3O95817 575 aa16.42■□□□□ 0.22
CTSA-212ENST00000606394 CCNA1P78396 465 aa16.42■□□□□ 0.22
CTSA-212ENST00000606394 CCL14Q16627 93 aa16.42■□□□□ 0.22
CTSA-212ENST00000606394 Q3C1V9 767 aa16.42■□□□□ 0.22
CTSA-212ENST00000606394 LPAR1Q92633 364 aa16.42■□□□□ 0.22
CTSA-212ENST00000606394 RAI14Q9P0K7 980 aa16.42■□□□□ 0.22
CTSA-212ENST00000606394 RABGAP1Q9Y3P9 1069 aa16.42■□□□□ 0.22
CTSA-212ENST00000606394 FRMPD3Q5JV73 1810 aa16.41■□□□□ 0.22
CTSA-212ENST00000606394 DNM1LO00429 736 aa16.41■□□□□ 0.22
CTSA-212ENST00000606394 IGSF3O75054 1194 aa16.41■□□□□ 0.22
CTSA-212ENST00000606394 HOXC6P09630 235 aa16.41■□□□□ 0.22
CTSA-212ENST00000606394 ARID4AP29374 1257 aaPredicted RBP16.41■□□□□ 0.22
CTSA-212ENST00000606394 TFCP2Q12800 502 aa16.41■□□□□ 0.22
CTSA-212ENST00000606394 EDC3Q96F86 508 aaKnown RBP16.41■□□□□ 0.22
CTSA-212ENST00000606394 FAM161BQ96MY7 647 aa16.41■□□□□ 0.22
CTSA-212ENST00000606394 CWC22Q9HCG8 908 aaKnown RBP16.41■□□□□ 0.22
CTSA-212ENST00000606394 DDX20Q9UHI6 824 aaKnown RBP16.41■□□□□ 0.22
CTSA-212ENST00000606394 PEX10O60683 326 aa16.4■□□□□ 0.22
CTSA-212ENST00000606394 GORABQ5T7V8 394 aa16.4■□□□□ 0.22
CTSA-212ENST00000606394 USP17L2Q6R6M4 530 aa16.4■□□□□ 0.22
CTSA-212ENST00000606394 SH3RF3Q8TEJ3 882 aaPredicted RBP16.4■□□□□ 0.22
CTSA-212ENST00000606394 C12orf42Q96LP6 360 aa16.4■□□□□ 0.22
CTSA-212ENST00000606394 CDX2Q99626 313 aaPredicted RBP16.4■□□□□ 0.22
CTSA-212ENST00000606394 PAGR1Q9BTK6 254 aa16.4■□□□□ 0.22
CTSA-212ENST00000606394 TRIM34Q9BYJ4 488 aa16.4■□□□□ 0.22
CTSA-212ENST00000606394 PRDM6Q9NQX0 595 aa16.4■□□□□ 0.22
CTSA-212ENST00000606394 SMC4Q9NTJ3 1288 aa16.4■□□□□ 0.22
CTSA-212ENST00000606394 LRP2BPQ9P2M1 347 aa16.4■□□□□ 0.22
CTSA-212ENST00000606394 ZBTB21Q9ULJ3 1066 aa16.4■□□□□ 0.22
CTSA-212ENST00000606394 SLC15A5A6NIM6 579 aa16.39■□□□□ 0.21
CTSA-212ENST00000606394 PPP4CP60510 307 aa16.39■□□□□ 0.21
CTSA-212ENST00000606394 MTX1Q13505 466 aa16.39■□□□□ 0.21
CTSA-212ENST00000606394 ATF7IPQ6VMQ6 1270 aa16.39■□□□□ 0.21
CTSA-212ENST00000606394 TBC1D9Q6ZT07 1266 aa16.39■□□□□ 0.21
CTSA-212ENST00000606394 CRACR2BQ8N4Y2 399 aaPredicted RBP16.39■□□□□ 0.21
CTSA-212ENST00000606394 MAFAQ8NHW3 353 aaPredicted RBP16.39■□□□□ 0.21
CTSA-212ENST00000606394 NEUROD6Q96NK8 337 aa16.39■□□□□ 0.21
CTSA-212ENST00000606394 SEMA6BQ9H3T3 888 aa16.39■□□□□ 0.21
CTSA-212ENST00000606394 DNAJC18Q9H819 358 aa16.39■□□□□ 0.21
CTSA-212ENST00000606394 EMILIN3Q9NT22 766 aa16.39■□□□□ 0.21
CTSA-212ENST00000606394 SIPA1L1O43166 1804 aa16.39■□□□□ 0.21
CTSA-212ENST00000606394 UQCRFS1P1P0C7P4 283 aa16.38■□□□□ 0.21
CTSA-212ENST00000606394 JAG1P78504 1218 aa16.38■□□□□ 0.21
CTSA-212ENST00000606394 SMAD3P84022 425 aaKnown RBP16.38■□□□□ 0.21
CTSA-212ENST00000606394 POTEEQ6S8J3 1075 aa16.38■□□□□ 0.21
CTSA-212ENST00000606394 PI16Q6UXB8 463 aa16.38■□□□□ 0.21
CTSA-212ENST00000606394 LBX2Q6XYB7 198 aa16.38■□□□□ 0.21
CTSA-212ENST00000606394 SYMPKQ92797 1274 aaKnown RBP16.38■□□□□ 0.21
CTSA-212ENST00000606394 API5Q9BZZ5 524 aaKnown RBP16.38■□□□□ 0.21
CTSA-212ENST00000606394 FLT1P17948 1338 aa16.38■□□□□ 0.21
CTSA-212ENST00000606394 LTBP2Q14767 1821 aa16.38■□□□□ 0.21
CTSA-212ENST00000606394 USP17L15C9J2P7 530 aa16.37■□□□□ 0.21
CTSA-212ENST00000606394 USP17L13C9JLJ4 530 aa16.37■□□□□ 0.21
CTSA-212ENST00000606394 USP17L11C9JVI0 530 aa16.37■□□□□ 0.21
CTSA-212ENST00000606394 USP17L18D6R9N7 530 aa16.37■□□□□ 0.21
CTSA-212ENST00000606394 USP17L22D6RA61 530 aa16.37■□□□□ 0.21
CTSA-212ENST00000606394 USP17L17D6RBQ6 530 aa16.37■□□□□ 0.21
CTSA-212ENST00000606394 USP17L19D6RCP7 530 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms