RNA–Protein interactions for RNA: ENST00000605424.5

MMP28-201, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MMP28, Length 1,928 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-201ENST00000605424 GUCY1A2P33402 732 aa22.92■■□□□ 1.26
MMP28-201ENST00000605424 RILPL1Q5EBL4 403 aa22.92■■□□□ 1.26
MMP28-201ENST00000605424 TMC4Q7Z404 712 aa22.92■■□□□ 1.26
MMP28-201ENST00000605424 DIS3L2Q8IYB7 885 aaKnown RBP22.92■■□□□ 1.26
MMP28-201ENST00000605424 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.92■■□□□ 1.26
MMP28-201ENST00000605424 PRPF3O43395 683 aaKnown RBP22.92■■□□□ 1.26
MMP28-201ENST00000605424 CUTAO60888 179 aa22.92■■□□□ 1.26
MMP28-201ENST00000605424 TROAPQ12815 778 aa22.92■■□□□ 1.26
MMP28-201ENST00000605424 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.92■■□□□ 1.26
MMP28-201ENST00000605424 CRAMP1Q96RY5 1269 aa22.92■■□□□ 1.26
MMP28-201ENST00000605424 NAT10Q9H0A0 1025 aaKnown RBP22.92■■□□□ 1.26
MMP28-201ENST00000605424 PODXL2Q9NZ53 605 aa22.92■■□□□ 1.26
MMP28-201ENST00000605424 KLRG2A4D1S0 409 aaPredicted RBP22.91■■□□□ 1.26
MMP28-201ENST00000605424 OFD1O75665 1012 aa22.91■■□□□ 1.26
MMP28-201ENST00000605424 WDHD1O75717 1129 aaPredicted RBP22.91■■□□□ 1.26
MMP28-201ENST00000605424 ZNF202O95125 648 aa22.91■■□□□ 1.26
MMP28-201ENST00000605424 GPSM2P81274 684 aa22.91■■□□□ 1.26
MMP28-201ENST00000605424 IQCB1Q15051 598 aa22.91■■□□□ 1.26
MMP28-201ENST00000605424 UPF1Q92900 1129 aaKnown RBP eCLIP22.91■■□□□ 1.26
MMP28-201ENST00000605424 KIAA1468Q9P260 1216 aa22.91■■□□□ 1.26
MMP28-201ENST00000605424 GOLGA6L19H0YKK7 550 aa22.9■■□□□ 1.26
MMP28-201ENST00000605424 SMIM22K7EJ46 135 aa22.9■■□□□ 1.26
MMP28-201ENST00000605424 KIAA2012Q0VF49 1180 aa22.9■■□□□ 1.26
MMP28-201ENST00000605424 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.9■■□□□ 1.26
MMP28-201ENST00000605424 NOL10Q9BSC4 688 aaKnown RBP22.9■■□□□ 1.26
MMP28-201ENST00000605424 MKRN1Q9UHC7 482 aaKnown RBP22.9■■□□□ 1.26
MMP28-201ENST00000605424 GGA1Q9UJY5 639 aa22.9■■□□□ 1.26
MMP28-201ENST00000605424 HPSEQ9Y251 543 aa22.9■■□□□ 1.26
MMP28-201ENST00000605424 BTBD18B2RXH4 712 aa22.9■■□□□ 1.26
MMP28-201ENST00000605424 PRDM1O75626 825 aa22.9■■□□□ 1.26
MMP28-201ENST00000605424 IL1R1P14778 569 aa22.9■■□□□ 1.26
MMP28-201ENST00000605424 PFKFB1P16118 471 aa22.9■■□□□ 1.26
MMP28-201ENST00000605424 FUT2Q10981 343 aa22.9■■□□□ 1.26
MMP28-201ENST00000605424 CEP57L1Q8IYX8 460 aa22.9■■□□□ 1.26
MMP28-201ENST00000605424 MORC2Q9Y6X9 1032 aaPredicted RBP22.9■■□□□ 1.26
MMP28-201ENST00000605424 UBE2Q2LH0YL09 131 aa22.89■■□□□ 1.25
MMP28-201ENST00000605424 CCDC178Q5BJE1 867 aa22.89■■□□□ 1.25
MMP28-201ENST00000605424 C12orf60Q5U649 245 aa22.89■■□□□ 1.25
MMP28-201ENST00000605424 SARM1Q6SZW1 724 aa22.89■■□□□ 1.25
MMP28-201ENST00000605424 AMOTL1Q8IY63 956 aa22.89■■□□□ 1.25
MMP28-201ENST00000605424 MCM9Q9NXL9 1143 aa22.89■■□□□ 1.25
MMP28-201ENST00000605424 ROBO3Q96MS0 1386 aa22.88■■□□□ 1.25
MMP28-201ENST00000605424 MARCKSP29966 332 aaPredicted RBP22.88■■□□□ 1.25
MMP28-201ENST00000605424 ZRSR1Q15695 479 aaKnown RBP22.88■■□□□ 1.25
MMP28-201ENST00000605424 RESP18Q5W5W9 173 aa22.88■■□□□ 1.25
MMP28-201ENST00000605424 PLA2G4DQ86XP0 818 aa22.88■■□□□ 1.25
MMP28-201ENST00000605424 CD209Q9NNX6 404 aa22.88■■□□□ 1.25
MMP28-201ENST00000605424 CEP131Q9UPN4 1083 aa22.88■■□□□ 1.25
MMP28-201ENST00000605424 UFL1O94874 794 aa22.88■■□□□ 1.25
MMP28-201ENST00000605424 SYKP43405 635 aa22.88■■□□□ 1.25
MMP28-201ENST00000605424 USP5P45974 858 aa22.88■■□□□ 1.25
MMP28-201ENST00000605424 CCDC82Q8N4S0 544 aa22.88■■□□□ 1.25
MMP28-201ENST00000605424 KCNJ14Q9UNX9 436 aa22.88■■□□□ 1.25
MMP28-201ENST00000605424 MYH6P13533 1939 aa22.87■■□□□ 1.25
MMP28-201ENST00000605424 POLRMTO00411 1230 aaKnown RBP22.87■■□□□ 1.25
MMP28-201ENST00000605424 C11orf57Q6ZUT1 292 aaPredicted RBP22.87■■□□□ 1.25
MMP28-201ENST00000605424 TMTC3Q6ZXV5 915 aa22.87■■□□□ 1.25
MMP28-201ENST00000605424 ELOA2Q8IYF1 753 aaPredicted RBP22.87■■□□□ 1.25
MMP28-201ENST00000605424 KRI1Q8N9T8 703 aaKnown RBP22.87■■□□□ 1.25
MMP28-201ENST00000605424 CTCFLQ8NI51 663 aaPredicted RBP22.87■■□□□ 1.25
MMP28-201ENST00000605424 BPIFA3Q9BQP9 254 aa22.87■■□□□ 1.25
MMP28-201ENST00000605424 MROH7-TTC4A0A0A0MT08 1334 aa22.87■■□□□ 1.25
MMP28-201ENST00000605424 CDC25BP30305 580 aa22.86■■□□□ 1.25
MMP28-201ENST00000605424 PKN1Q16512 942 aa22.86■■□□□ 1.25
MMP28-201ENST00000605424 SHC4Q6S5L8 630 aa22.86■■□□□ 1.25
MMP28-201ENST00000605424 CMTR1Q8N1G2 835 aaKnown RBP22.86■■□□□ 1.25
MMP28-201ENST00000605424 TRIM5Q9C035 493 aa22.86■■□□□ 1.25
MMP28-201ENST00000605424 JAG2Q9Y219 1238 aa22.86■■□□□ 1.25
MMP28-201ENST00000605424 TSPY2A6NKD2 308 aa22.86■■□□□ 1.25
MMP28-201ENST00000605424 BECN2A8MW95 431 aa22.86■■□□□ 1.25
MMP28-201ENST00000605424 ZNF75DP51815 510 aa22.86■■□□□ 1.25
MMP28-201ENST00000605424 DGKHQ86XP1 1220 aa22.86■■□□□ 1.25
MMP28-201ENST00000605424 SLF2Q8IX21 1173 aa22.86■■□□□ 1.25
MMP28-201ENST00000605424 TBC1D22AQ8WUA7 517 aa22.86■■□□□ 1.25
MMP28-201ENST00000605424 ANKS1AQ92625 1134 aa22.86■■□□□ 1.25
MMP28-201ENST00000605424 PHF20Q9BVI0 1012 aa22.86■■□□□ 1.25
MMP28-201ENST00000605424 RGPD3A6NKT7 1758 aaPredicted RBP22.85■■□□□ 1.25
MMP28-201ENST00000605424 RGPD4Q7Z3J3 1758 aa22.85■■□□□ 1.25
MMP28-201ENST00000605424 TOB1P50616 345 aaPredicted RBP22.85■■□□□ 1.25
MMP28-201ENST00000605424 DDR1Q08345 913 aa22.85■■□□□ 1.25
MMP28-201ENST00000605424 SF3B2Q13435 895 aaKnown RBP22.85■■□□□ 1.25
MMP28-201ENST00000605424 CYP2D6P10635 497 aa22.84■■□□□ 1.25
MMP28-201ENST00000605424 PLCG2P16885 1265 aa22.84■■□□□ 1.25
MMP28-201ENST00000605424 ZNF827Q17R98 1081 aa22.84■■□□□ 1.25
MMP28-201ENST00000605424 ZNF579Q8NAF0 562 aaKnown RBP22.84■■□□□ 1.25
MMP28-201ENST00000605424 SH3RF3Q8TEJ3 882 aaPredicted RBP22.84■■□□□ 1.25
MMP28-201ENST00000605424 FAM163AQ96GL9 167 aaPredicted RBP22.84■■□□□ 1.25
MMP28-201ENST00000605424 BRMS1Q9HCU9 246 aa22.84■■□□□ 1.25
MMP28-201ENST00000605424 USP17L8P0C7I0 530 aa22.84■■□□□ 1.25
MMP28-201ENST00000605424 PTPREP23469 700 aa22.84■■□□□ 1.25
MMP28-201ENST00000605424 KIF5BP33176 963 aa22.84■■□□□ 1.25
MMP28-201ENST00000605424 BAG6P46379 1132 aa22.84■■□□□ 1.25
MMP28-201ENST00000605424 PIBF1Q8WXW3 757 aa22.84■■□□□ 1.25
MMP28-201ENST00000605424 ZNF287Q9HBT7 754 aa22.84■■□□□ 1.25
MMP28-201ENST00000605424 TCP11L1Q9NUJ3 509 aa22.84■■□□□ 1.25
MMP28-201ENST00000605424 V9GY48 417 aaPredicted RBP22.84■■□□□ 1.25
MMP28-201ENST00000605424 KRT2P35908 639 aa22.83■■□□□ 1.25
MMP28-201ENST00000605424 NLRP12P59046 1061 aa22.83■■□□□ 1.25
MMP28-201ENST00000605424 FAM47AQ5JRC9 791 aa22.83■■□□□ 1.25
MMP28-201ENST00000605424 DHX40Q8IX18 779 aaKnown RBP22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms