RNA–Protein interactions for RNA: ENST00000604817.2

IGHV3-29-201, Transcript of immunoglobulin heavy variable 3-29 (pseudogene), humanhuman

BASIC

Gene IGHV3-29, Length 344 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-29-201ENST00000604817 ZCCHC11Q5TAX3 1644 aaKnown RBP5.23□□□□□ -1.57
IGHV3-29-201ENST00000604817 ESYT3A0FGR9 886 aa5.23□□□□□ -1.57
IGHV3-29-201ENST00000604817 PRR19A6NJB7 356 aa5.23□□□□□ -1.57
IGHV3-29-201ENST00000604817 FSCN2O14926 492 aa5.23□□□□□ -1.57
IGHV3-29-201ENST00000604817 WISP1O95388 367 aa5.23□□□□□ -1.57
IGHV3-29-201ENST00000604817 CYP2E1P05181 493 aaPredicted RBP5.23□□□□□ -1.57
IGHV3-29-201ENST00000604817 RLBP1P12271 317 aa5.23□□□□□ -1.57
IGHV3-29-201ENST00000604817 SOX9P48436 509 aa5.23□□□□□ -1.57
IGHV3-29-201ENST00000604817 MASP1P48740 699 aa5.23□□□□□ -1.57
IGHV3-29-201ENST00000604817 PEAR1Q5VY43 1037 aaPredicted RBP5.23□□□□□ -1.57
IGHV3-29-201ENST00000604817 ANKRD34AQ69YU3 496 aa5.23□□□□□ -1.57
IGHV3-29-201ENST00000604817 KIAA0825Q8IV33 1275 aa5.23□□□□□ -1.57
IGHV3-29-201ENST00000604817 FAM20CQ8IXL6 584 aa5.23□□□□□ -1.57
IGHV3-29-201ENST00000604817 CEP120Q8N960 986 aa5.23□□□□□ -1.57
IGHV3-29-201ENST00000604817 GLIS3Q8NEA6 775 aa5.23□□□□□ -1.57
IGHV3-29-201ENST00000604817 JDP2Q8WYK2 163 aa5.23□□□□□ -1.57
IGHV3-29-201ENST00000604817 APPBP2Q92624 585 aa5.23□□□□□ -1.57
IGHV3-29-201ENST00000604817 WNT8BQ93098 351 aa5.23□□□□□ -1.57
IGHV3-29-201ENST00000604817 EAF1Q96JC9 268 aaPredicted RBP5.23□□□□□ -1.57
IGHV3-29-201ENST00000604817 FAM83CQ9BQN1 747 aa5.23□□□□□ -1.57
IGHV3-29-201ENST00000604817 RSRP1Q9BUV0 290 aa5.23□□□□□ -1.57
IGHV3-29-201ENST00000604817 NOC4LQ9BVI4 516 aaKnown RBP5.23□□□□□ -1.57
IGHV3-29-201ENST00000604817 TRIM55Q9BYV6 548 aa5.23□□□□□ -1.57
IGHV3-29-201ENST00000604817 SLKQ9H2G2 1235 aaPredicted RBP5.23□□□□□ -1.57
IGHV3-29-201ENST00000604817 LIN7BQ9HAP6 207 aa5.23□□□□□ -1.57
IGHV3-29-201ENST00000604817 GINM1Q9NU53 330 aa5.23□□□□□ -1.57
IGHV3-29-201ENST00000604817 EFR3BQ9Y2G0 817 aa5.23□□□□□ -1.57
IGHV3-29-201ENST00000604817 CFAP43Q8NDM7 1665 aa5.23□□□□□ -1.57
IGHV3-29-201ENST00000604817 KIF27Q86VH2 1401 aa5.23□□□□□ -1.57
IGHV3-29-201ENST00000604817 HMX2A2RU54 273 aa5.22□□□□□ -1.57
IGHV3-29-201ENST00000604817 SART1O43290 800 aaKnown RBP5.22□□□□□ -1.57
IGHV3-29-201ENST00000604817 PTPRAP18433 802 aa5.22□□□□□ -1.57
IGHV3-29-201ENST00000604817 FZD5Q13467 585 aa5.22□□□□□ -1.57
IGHV3-29-201ENST00000604817 PWP1Q13610 501 aa5.22□□□□□ -1.57
IGHV3-29-201ENST00000604817 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.22□□□□□ -1.57
IGHV3-29-201ENST00000604817 KIAA1211Q6ZU35 1233 aa5.22□□□□□ -1.57
IGHV3-29-201ENST00000604817 CCNJLQ8IV13 435 aa5.22□□□□□ -1.57
IGHV3-29-201ENST00000604817 CCAR1Q8IX12 1150 aaKnown RBP5.22□□□□□ -1.57
IGHV3-29-201ENST00000604817 TMEM102Q8N9M5 508 aaPredicted RBP5.22□□□□□ -1.57
IGHV3-29-201ENST00000604817 GIMAP7Q8NHV1 300 aa5.22□□□□□ -1.57
IGHV3-29-201ENST00000604817 OSMRQ99650 979 aa5.22□□□□□ -1.57
IGHV3-29-201ENST00000604817 ZKSCAN3Q9BRR0 538 aa5.22□□□□□ -1.57
IGHV3-29-201ENST00000604817 BHLHE41Q9C0J9 482 aaPredicted RBP5.22□□□□□ -1.57
IGHV3-29-201ENST00000604817 LACRTQ9GZZ8 138 aa5.22□□□□□ -1.57
IGHV3-29-201ENST00000604817 CCDC113Q9H0I3 377 aa5.22□□□□□ -1.57
IGHV3-29-201ENST00000604817 DZANK1Q9NVP4 752 aa5.22□□□□□ -1.57
IGHV3-29-201ENST00000604817 GEMIN8Q9NWZ8 242 aaKnown RBP5.22□□□□□ -1.57
IGHV3-29-201ENST00000604817 BCCIPQ9P287 314 aaKnown RBP eCLIP5.22□□□□□ -1.57
IGHV3-29-201ENST00000604817 PRKAG3Q9UGI9 489 aa5.22□□□□□ -1.57
IGHV3-29-201ENST00000604817 STRIP2Q9ULQ0 834 aa5.22□□□□□ -1.57
IGHV3-29-201ENST00000604817 TTF2Q9UNY4 1162 aaKnown RBP5.22□□□□□ -1.57
IGHV3-29-201ENST00000604817 MSRB2Q9Y3D2 182 aa5.22□□□□□ -1.57
IGHV3-29-201ENST00000604817 DISP1Q96F81 1524 aa5.22□□□□□ -1.57
IGHV3-29-201ENST00000604817 TMEM238LA0A1B0GVL6 79 aa5.21□□□□□ -1.58
IGHV3-29-201ENST00000604817 EIF4EBP3O60516 100 aaPredicted RBP5.21□□□□□ -1.58
IGHV3-29-201ENST00000604817 RAPGEF3O95398 923 aa5.21□□□□□ -1.58
IGHV3-29-201ENST00000604817 CABP4P57796 275 aa5.21□□□□□ -1.58
IGHV3-29-201ENST00000604817 RHBDL3P58872 404 aa5.21□□□□□ -1.58
IGHV3-29-201ENST00000604817 ATP11AP98196 1134 aa5.21□□□□□ -1.58
IGHV3-29-201ENST00000604817 RPS26P11Q5JNZ5 115 aaPredicted RBP5.21□□□□□ -1.58
IGHV3-29-201ENST00000604817 ODR4Q5SWX8 454 aa5.21□□□□□ -1.58
IGHV3-29-201ENST00000604817 DTHD1Q6ZMT9 781 aa5.21□□□□□ -1.58
IGHV3-29-201ENST00000604817 HOMER1Q86YM7 354 aa5.21□□□□□ -1.58
IGHV3-29-201ENST00000604817 C3orf58Q8NDZ4 430 aa5.21□□□□□ -1.58
IGHV3-29-201ENST00000604817 SHKBP1Q8TBC3 707 aa5.21□□□□□ -1.58
IGHV3-29-201ENST00000604817 EVI5LQ96CN4 794 aa5.21□□□□□ -1.58
IGHV3-29-201ENST00000604817 SGSM3Q96HU1 749 aa5.21□□□□□ -1.58
IGHV3-29-201ENST00000604817 DNAJC7Q99615 494 aa5.21□□□□□ -1.58
IGHV3-29-201ENST00000604817 CEP44Q9C0F1 390 aa5.21□□□□□ -1.58
IGHV3-29-201ENST00000604817 RNF208Q9H0X6 261 aa5.21□□□□□ -1.58
IGHV3-29-201ENST00000604817 KCNF1Q9H3M0 494 aa5.21□□□□□ -1.58
IGHV3-29-201ENST00000604817 ABCB6Q9NP58 842 aa5.21□□□□□ -1.58
IGHV3-29-201ENST00000604817 SEC31BQ9NQW1 1179 aa5.21□□□□□ -1.58
IGHV3-29-201ENST00000604817 TMEM260Q9NX78 707 aa5.21□□□□□ -1.58
IGHV3-29-201ENST00000604817 KCNK4Q9NYG8 393 aa5.21□□□□□ -1.58
IGHV3-29-201ENST00000604817 THRAP3Q9Y2W1 955 aaKnown RBP5.21□□□□□ -1.58
IGHV3-29-201ENST00000604817 SETD1BQ9UPS6 1966 aaKnown RBP5.21□□□□□ -1.58
IGHV3-29-201ENST00000604817 IQGAP2Q13576 1575 aa5.21□□□□□ -1.58
IGHV3-29-201ENST00000604817 BCORL1Q5H9F3 1711 aa5.2□□□□□ -1.58
IGHV3-29-201ENST00000604817 TM4SF5O14894 197 aa5.2□□□□□ -1.58
IGHV3-29-201ENST00000604817 PRC1O43663 620 aa5.2□□□□□ -1.58
IGHV3-29-201ENST00000604817 ADAMTS4O75173 837 aa5.2□□□□□ -1.58
IGHV3-29-201ENST00000604817 VIL1P09327 827 aaKnown RBP5.2□□□□□ -1.58
IGHV3-29-201ENST00000604817 BMP3P12645 472 aa5.2□□□□□ -1.58
IGHV3-29-201ENST00000604817 ITPKAP23677 461 aa5.2□□□□□ -1.58
IGHV3-29-201ENST00000604817 PIP4K2BP78356 416 aa5.2□□□□□ -1.58
IGHV3-29-201ENST00000604817 SQSTM1Q13501 440 aa5.2□□□□□ -1.58
IGHV3-29-201ENST00000604817 CPSF6Q16630 551 aaKnown RBP eCLIP5.2□□□□□ -1.58
IGHV3-29-201ENST00000604817 TAF7LQ5H9L4 462 aa5.2□□□□□ -1.58
IGHV3-29-201ENST00000604817 TXNDC11Q6PKC3 985 aa5.2□□□□□ -1.58
IGHV3-29-201ENST00000604817 BEND4Q6ZU67 534 aa5.2□□□□□ -1.58
IGHV3-29-201ENST00000604817 APBB1IPQ7Z5R6 666 aaPredicted RBP5.2□□□□□ -1.58
IGHV3-29-201ENST00000604817 FERMT3Q86UX7 667 aa5.2□□□□□ -1.58
IGHV3-29-201ENST00000604817 C8orf48Q96LL4 319 aa5.2□□□□□ -1.58
IGHV3-29-201ENST00000604817 TCF12Q99081 682 aa5.2□□□□□ -1.58
IGHV3-29-201ENST00000604817 CARD10Q9BWT7 1032 aa5.2□□□□□ -1.58
IGHV3-29-201ENST00000604817 PBX4Q9BYU1 374 aa5.2□□□□□ -1.58
IGHV3-29-201ENST00000604817 OSGEPQ9NPF4 335 aa5.2□□□□□ -1.58
IGHV3-29-201ENST00000604817 LATS2Q9NRM7 1088 aa5.2□□□□□ -1.58
IGHV3-29-201ENST00000604817 H3BRJ5 948 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms