RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 GOLGA6AQ9NYA3 693 aa14.09□□□□□ -0.15
CDCA3-212ENST00000604599 WWC3Q9ULE0 1092 aa14.09□□□□□ -0.15
CDCA3-212ENST00000604599 A0A087WZG4 1122 aa14.08□□□□□ -0.15
CDCA3-212ENST00000604599 MYBL2P10244 700 aa14.08□□□□□ -0.15
CDCA3-212ENST00000604599 CASP1P29466 404 aa14.08□□□□□ -0.15
CDCA3-212ENST00000604599 NT5DC1Q5TFE4 455 aa14.08□□□□□ -0.15
CDCA3-212ENST00000604599 USP49Q70CQ1 688 aa14.08□□□□□ -0.15
CDCA3-212ENST00000604599 NKX2-3Q8TAU0 364 aa14.08□□□□□ -0.15
CDCA3-212ENST00000604599 MMS19Q96T76 1030 aa14.08□□□□□ -0.15
CDCA3-212ENST00000604599 TMEM2Q9UHN6 1383 aa14.08□□□□□ -0.16
CDCA3-212ENST00000604599 LMO7Q8WWI1 1683 aa14.08□□□□□ -0.16
CDCA3-212ENST00000604599 ZMYM6O95789 1325 aa14.08□□□□□ -0.16
CDCA3-212ENST00000604599 LTN1O94822 1766 aa14.08□□□□□ -0.16
CDCA3-212ENST00000604599 SHOX2O60902 331 aaPredicted RBP14.08□□□□□ -0.16
CDCA3-212ENST00000604599 PBX1P40424 430 aa14.08□□□□□ -0.16
CDCA3-212ENST00000604599 MYL10Q9BUA6 226 aa14.08□□□□□ -0.16
CDCA3-212ENST00000604599 SENP2Q9HC62 589 aa14.08□□□□□ -0.16
CDCA3-212ENST00000604599 RNF225M0QZC1 329 aaPredicted RBP14.08□□□□□ -0.16
CDCA3-212ENST00000604599 AGPSO00116 658 aa14.08□□□□□ -0.16
CDCA3-212ENST00000604599 CCDC172P0C7W6 258 aa14.08□□□□□ -0.16
CDCA3-212ENST00000604599 CD44P16070 742 aaKnown RBP14.08□□□□□ -0.16
CDCA3-212ENST00000604599 RABL6Q3YEC7 729 aaPredicted RBP14.08□□□□□ -0.16
CDCA3-212ENST00000604599 IP6K1Q92551 441 aa14.08□□□□□ -0.16
CDCA3-212ENST00000604599 NBPF3Q9H094 633 aa14.08□□□□□ -0.16
CDCA3-212ENST00000604599 TFR2Q9UP52 801 aa14.08□□□□□ -0.16
CDCA3-212ENST00000604599 AMOTL2Q9Y2J4 779 aa14.08□□□□□ -0.16
CDCA3-212ENST00000604599 SAMM50Q9Y512 469 aa14.08□□□□□ -0.16
CDCA3-212ENST00000604599 MYCNP04198 464 aaPredicted RBP14.07□□□□□ -0.16
CDCA3-212ENST00000604599 LTKP29376 864 aa14.07□□□□□ -0.16
CDCA3-212ENST00000604599 AFMP43652 599 aa14.07□□□□□ -0.16
CDCA3-212ENST00000604599 ANKRD13DQ6ZTN6 518 aa14.07□□□□□ -0.16
CDCA3-212ENST00000604599 NUP88Q99567 741 aaPredicted RBP14.07□□□□□ -0.16
CDCA3-212ENST00000604599 SELENOOQ9BVL4 669 aa14.07□□□□□ -0.16
CDCA3-212ENST00000604599 ERCC5P28715 1186 aaPredicted RBP14.07□□□□□ -0.16
CDCA3-212ENST00000604599 INPP5BP32019 993 aa14.07□□□□□ -0.16
CDCA3-212ENST00000604599 FILIP1LQ4L180 1135 aa14.07□□□□□ -0.16
CDCA3-212ENST00000604599 SPATA1Q5VX52 437 aa14.07□□□□□ -0.16
CDCA3-212ENST00000604599 TMTC1Q8IUR5 882 aa14.07□□□□□ -0.16
CDCA3-212ENST00000604599 ABHD10Q9NUJ1 306 aa14.07□□□□□ -0.16
CDCA3-212ENST00000604599 BTBD18B2RXH4 712 aa14.06□□□□□ -0.16
CDCA3-212ENST00000604599 ZNF213O14771 459 aa14.06□□□□□ -0.16
CDCA3-212ENST00000604599 ATP1A1P05023 1023 aaKnown RBP14.06□□□□□ -0.16
CDCA3-212ENST00000604599 ATP6V1AP38606 617 aa14.06□□□□□ -0.16
CDCA3-212ENST00000604599 TRAPPC11Q7Z392 1133 aa14.06□□□□□ -0.16
CDCA3-212ENST00000604599 ATG9AQ7Z3C6 839 aa14.06□□□□□ -0.16
CDCA3-212ENST00000604599 TRIML1Q8N9V2 468 aa14.06□□□□□ -0.16
CDCA3-212ENST00000604599 FBXO2Q9UK22 296 aaPredicted RBP14.06□□□□□ -0.16
CDCA3-212ENST00000604599 CEP83Q9Y592 693 aa14.06□□□□□ -0.16
CDCA3-212ENST00000604599 GOLGA6BA6NDN3 693 aa14.06□□□□□ -0.16
CDCA3-212ENST00000604599 ACTN4O43707 911 aaKnown RBP14.06□□□□□ -0.16
CDCA3-212ENST00000604599 RANBP6O60518 1105 aaKnown RBP14.06□□□□□ -0.16
CDCA3-212ENST00000604599 CDKL5O76039 1030 aa14.06□□□□□ -0.16
CDCA3-212ENST00000604599 IARSP41252 1262 aaKnown RBP14.06□□□□□ -0.16
CDCA3-212ENST00000604599 GNGT1P63211 74 aa14.06□□□□□ -0.16
CDCA3-212ENST00000604599 CAPS2Q9BXY5 557 aa14.06□□□□□ -0.16
CDCA3-212ENST00000604599 ESF1Q9H501 851 aaKnown RBP14.06□□□□□ -0.16
CDCA3-212ENST00000604599 MYO1AQ9UBC5 1043 aa14.06□□□□□ -0.16
CDCA3-212ENST00000604599 ANGEL1Q9UNK9 670 aaKnown RBP14.06□□□□□ -0.16
CDCA3-212ENST00000604599 UBN2Q6ZU65 1347 aa14.06□□□□□ -0.16
CDCA3-212ENST00000604599 DIP2AQ14689 1571 aa14.05□□□□□ -0.16
CDCA3-212ENST00000604599 CPDO75976 1380 aa14.05□□□□□ -0.16
CDCA3-212ENST00000604599 SHTN1A0MZ66 631 aa14.05□□□□□ -0.16
CDCA3-212ENST00000604599 TOB1P50616 345 aaPredicted RBP14.05□□□□□ -0.16
CDCA3-212ENST00000604599 CPLX2Q6PUV4 134 aaKnown RBP14.05□□□□□ -0.16
CDCA3-212ENST00000604599 APOA5Q6Q788 366 aa14.05□□□□□ -0.16
CDCA3-212ENST00000604599 CYP26C1Q6V0L0 522 aa14.05□□□□□ -0.16
CDCA3-212ENST00000604599 CYB5R4Q7L1T6 521 aa14.05□□□□□ -0.16
CDCA3-212ENST00000604599 NOSTRINQ8IVI9 506 aa14.05□□□□□ -0.16
CDCA3-212ENST00000604599 ZNF594Q96JF6 807 aaPredicted RBP14.05□□□□□ -0.16
CDCA3-212ENST00000604599 CHP1Q99653 195 aa14.05□□□□□ -0.16
CDCA3-212ENST00000604599 SLC26A6Q9BXS9 759 aa14.05□□□□□ -0.16
CDCA3-212ENST00000604599 PUS7LQ9H0K6 701 aaKnown RBP14.05□□□□□ -0.16
CDCA3-212ENST00000604599 AFDNP55196 1824 aaKnown RBP14.05□□□□□ -0.16
CDCA3-212ENST00000604599 ECM29Q5VYK3 1845 aa14.05□□□□□ -0.16
CDCA3-212ENST00000604599 PTPREP23469 700 aa14.04□□□□□ -0.16
CDCA3-212ENST00000604599 MCM3P25205 808 aa14.04□□□□□ -0.16
CDCA3-212ENST00000604599 USP8P40818 1118 aa14.04□□□□□ -0.16
CDCA3-212ENST00000604599 LRRC24Q50LG9 513 aa14.04□□□□□ -0.16
CDCA3-212ENST00000604599 CDKAL1Q5VV42 579 aa14.04□□□□□ -0.16
CDCA3-212ENST00000604599 BANK1Q8NDB2 785 aa14.04□□□□□ -0.16
CDCA3-212ENST00000604599 VPS16Q9H269 839 aa14.04□□□□□ -0.16
CDCA3-212ENST00000604599 KCNJ14Q9UNX9 436 aa14.04□□□□□ -0.16
CDCA3-212ENST00000604599 CAPN7Q9Y6W3 813 aa14.04□□□□□ -0.16
CDCA3-212ENST00000604599 GRIN2DO15399 1336 aa14.04□□□□□ -0.16
CDCA3-212ENST00000604599 N4BP3O15049 544 aa14.04□□□□□ -0.16
CDCA3-212ENST00000604599 A1BGP04217 495 aa14.04□□□□□ -0.16
CDCA3-212ENST00000604599 PPFIA1Q13136 1202 aa14.04□□□□□ -0.16
CDCA3-212ENST00000604599 ELOA2Q8IYF1 753 aaPredicted RBP14.04□□□□□ -0.16
CDCA3-212ENST00000604599 CAGE1Q8TC20 777 aa14.04□□□□□ -0.16
CDCA3-212ENST00000604599 CCDC51Q96ER9 411 aa14.04□□□□□ -0.16
CDCA3-212ENST00000604599 CTAGE1Q96RT6 745 aa14.04□□□□□ -0.16
CDCA3-212ENST00000604599 JPH2Q9BR39 696 aaPredicted RBP14.04□□□□□ -0.16
CDCA3-212ENST00000604599 REXO2Q9Y3B8 237 aaKnown RBP14.04□□□□□ -0.16
CDCA3-212ENST00000604599 PCDHB6Q9Y5E3 794 aa14.04□□□□□ -0.16
CDCA3-212ENST00000604599 SAR1BQ9Y6B6 198 aa14.04□□□□□ -0.16
CDCA3-212ENST00000604599 OVOS2A0A0G2JMS6 1433 aa14.04□□□□□ -0.16
CDCA3-212ENST00000604599 H0YHG0 523 aa14.04□□□□□ -0.16
CDCA3-212ENST00000604599 MYO1FO00160 1098 aa14.04□□□□□ -0.16
CDCA3-212ENST00000604599 EIF3HO15372 352 aaKnown RBP eCLIP14.04□□□□□ -0.164e-7■■■■□ 21.8
CDCA3-212ENST00000604599 KRT9P35527 623 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms