RNA–Protein interactions for RNA: ENST00000604213.1

LYSMD4-211, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best)

Gene LYSMD4, Length 2,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-211ENST00000604213 RPS6KA5O75582 802 aa17.36■□□□□ 0.37
LYSMD4-211ENST00000604213 TFRCP02786 760 aaKnown RBP17.36■□□□□ 0.37
LYSMD4-211ENST00000604213 IFNAR1P17181 557 aa17.36■□□□□ 0.37
LYSMD4-211ENST00000604213 FECHP22830 423 aa17.36■□□□□ 0.37
LYSMD4-211ENST00000604213 LIFRP42702 1097 aa17.36■□□□□ 0.37
LYSMD4-211ENST00000604213 SAFBQ15424 915 aaKnown RBP eCLIP17.36■□□□□ 0.37
LYSMD4-211ENST00000604213 RILPL1Q5EBL4 403 aa17.36■□□□□ 0.37
LYSMD4-211ENST00000604213 LEKR1Q6ZMV7 388 aa17.36■□□□□ 0.37
LYSMD4-211ENST00000604213 SLC35F6Q8N357 371 aa17.36■□□□□ 0.37
LYSMD4-211ENST00000604213 FOXP1Q9H334 677 aaPredicted RBP17.36■□□□□ 0.37
LYSMD4-211ENST00000604213 IVLP07476 585 aa17.35■□□□□ 0.37
LYSMD4-211ENST00000604213 CD44P16070 742 aaKnown RBP17.35■□□□□ 0.37
LYSMD4-211ENST00000604213 VSNL1P62760 191 aa17.35■□□□□ 0.37
LYSMD4-211ENST00000604213 CUL4BQ13620 913 aa17.35■□□□□ 0.37
LYSMD4-211ENST00000604213 CT47A1Q5JQC4 288 aaPredicted RBP17.35■□□□□ 0.37
LYSMD4-211ENST00000604213 CDKAL1Q5VV42 579 aa17.35■□□□□ 0.37
LYSMD4-211ENST00000604213 WWC2Q6AWC2 1192 aa17.35■□□□□ 0.37
LYSMD4-211ENST00000604213 SLC12A7Q9Y666 1083 aa17.35■□□□□ 0.37
LYSMD4-211ENST00000604213 RHOXF2BP0C7M4 288 aa17.35■□□□□ 0.37
LYSMD4-211ENST00000604213 CCDC85AQ96PX6 553 aaPredicted RBP17.35■□□□□ 0.37
LYSMD4-211ENST00000604213 RHOXF2Q9BQY4 288 aa17.35■□□□□ 0.37
LYSMD4-211ENST00000604213 ISCA1Q9BUE6 129 aa17.35■□□□□ 0.37
LYSMD4-211ENST00000604213 PIH1D3Q9NQM4 214 aaKnown RBP17.35■□□□□ 0.37
LYSMD4-211ENST00000604213 CASP8Q14790 479 aa17.34■□□□□ 0.37
LYSMD4-211ENST00000604213 UBE3CQ15386 1083 aa17.34■□□□□ 0.37
LYSMD4-211ENST00000604213 PKD1L3Q7Z443 1732 aa17.34■□□□□ 0.37
LYSMD4-211ENST00000604213 ZBTB9Q96C00 473 aa17.34■□□□□ 0.37
LYSMD4-211ENST00000604213 CDC5LQ99459 802 aaKnown RBP17.34■□□□□ 0.37
LYSMD4-211ENST00000604213 CSRNP2Q9H175 543 aa17.34■□□□□ 0.37
LYSMD4-211ENST00000604213 RIC1Q4ADV7 1423 aa17.34■□□□□ 0.37
LYSMD4-211ENST00000604213 ABL1P00519 1130 aa17.33■□□□□ 0.37
LYSMD4-211ENST00000604213 CASP14P31944 242 aa17.33■□□□□ 0.37
LYSMD4-211ENST00000604213 STX17P56962 302 aa17.33■□□□□ 0.37
LYSMD4-211ENST00000604213 WHAMMP3Q1A5X7 153 aa17.33■□□□□ 0.37
LYSMD4-211ENST00000604213 ACRBPQ8NEB7 543 aa17.33■□□□□ 0.37
LYSMD4-211ENST00000604213 ZSWIM5Q9P217 1185 aa17.33■□□□□ 0.37
LYSMD4-211ENST00000604213 TTF2Q9UNY4 1162 aaKnown RBP17.33■□□□□ 0.37
LYSMD4-211ENST00000604213 PLEKHG2Q9H7P9 1386 aa17.33■□□□□ 0.37
LYSMD4-211ENST00000604213 WDR17Q8IZU2 1322 aa17.33■□□□□ 0.37
LYSMD4-211ENST00000604213 SYNRGQ9UMZ2 1314 aa17.33■□□□□ 0.37
LYSMD4-211ENST00000604213 MST1RQ04912 1400 aa17.33■□□□□ 0.36
LYSMD4-211ENST00000604213 IFIT3O14879 490 aaKnown RBP17.33■□□□□ 0.36
LYSMD4-211ENST00000604213 GYPCP04921 128 aa17.33■□□□□ 0.36
LYSMD4-211ENST00000604213 CSB-PGBD3P0DP91 1061 aa17.33■□□□□ 0.36
LYSMD4-211ENST00000604213 FXR1P51114 621 aaKnown RBP eCLIP17.33■□□□□ 0.36
LYSMD4-211ENST00000604213 NR5A1Q13285 461 aa17.33■□□□□ 0.36
LYSMD4-211ENST00000604213 TAF7LQ5H9L4 462 aa17.33■□□□□ 0.36
LYSMD4-211ENST00000604213 KLHL10Q6JEL2 608 aa17.33■□□□□ 0.36
LYSMD4-211ENST00000604213 ANKLE2Q86XL3 938 aa17.33■□□□□ 0.36
LYSMD4-211ENST00000604213 CCDC51Q96ER9 411 aa17.33■□□□□ 0.36
LYSMD4-211ENST00000604213 NAPGQ99747 312 aaPredicted RBP17.33■□□□□ 0.36
LYSMD4-211ENST00000604213 TACC3Q9Y6A5 838 aa17.33■□□□□ 0.36
LYSMD4-211ENST00000604213 NID2Q14112 1375 aa17.33■□□□□ 0.36
LYSMD4-211ENST00000604213 ZNF532Q9HCE3 1301 aa17.33■□□□□ 0.36
LYSMD4-211ENST00000604213 A0A087X0B3 334 aa17.32■□□□□ 0.36
LYSMD4-211ENST00000604213 CTAGE15A4D2H0 777 aa17.32■□□□□ 0.36
LYSMD4-211ENST00000604213 CTAGE8P0CG41 777 aa17.32■□□□□ 0.36
LYSMD4-211ENST00000604213 ALX1Q15699 326 aa17.32■□□□□ 0.36
LYSMD4-211ENST00000604213 FOXR1Q6PIV2 292 aa17.32■□□□□ 0.36
LYSMD4-211ENST00000604213 CTAGE6Q86UF2 777 aa17.32■□□□□ 0.36
LYSMD4-211ENST00000604213 CNGA4Q8IV77 575 aa17.32■□□□□ 0.36
LYSMD4-211ENST00000604213 CTAGE4Q8IX94 777 aa17.32■□□□□ 0.36
LYSMD4-211ENST00000604213 CTAGE1Q96RT6 745 aa17.32■□□□□ 0.36
LYSMD4-211ENST00000604213 GBP3Q9H0R5 595 aa17.32■□□□□ 0.36
LYSMD4-211ENST00000604213 EFCC1Q9HA90 598 aa17.32■□□□□ 0.36
LYSMD4-211ENST00000604213 WWC3Q9ULE0 1092 aa17.32■□□□□ 0.36
LYSMD4-211ENST00000604213 TBC1D2BQ9UPU7 963 aa17.32■□□□□ 0.36
LYSMD4-211ENST00000604213 AKAP11Q9UKA4 1901 aa17.32■□□□□ 0.36
LYSMD4-211ENST00000604213 LRP6O75581 1613 aa17.32■□□□□ 0.36
LYSMD4-211ENST00000604213 SEMA3EO15041 775 aa17.32■□□□□ 0.36
LYSMD4-211ENST00000604213 ARHGAP25P42331 645 aa17.32■□□□□ 0.36
LYSMD4-211ENST00000604213 TNNT3P45378 269 aaPredicted RBP17.32■□□□□ 0.36
LYSMD4-211ENST00000604213 SH3RF1Q7Z6J0 888 aa17.32■□□□□ 0.36
LYSMD4-211ENST00000604213 FAM71BQ8TC56 605 aa17.32■□□□□ 0.36
LYSMD4-211ENST00000604213 ZNF512BQ96KM6 892 aaPredicted RBP17.32■□□□□ 0.36
LYSMD4-211ENST00000604213 STRBPQ96SI9 672 aaKnown RBP17.32■□□□□ 0.36
LYSMD4-211ENST00000604213 STRN4Q9NRL3 753 aa17.32■□□□□ 0.36
LYSMD4-211ENST00000604213 ITIH6Q6UXX5 1313 aa17.32■□□□□ 0.36
LYSMD4-211ENST00000604213 IDH1O75874 414 aaKnown RBP17.31■□□□□ 0.36
LYSMD4-211ENST00000604213 CSF1RP07333 972 aa17.31■□□□□ 0.36
LYSMD4-211ENST00000604213 PDE6AP16499 860 aa17.31■□□□□ 0.36
LYSMD4-211ENST00000604213 ERVK-24P63145 666 aa17.31■□□□□ 0.36
LYSMD4-211ENST00000604213 PIP4K2BP78356 416 aa17.31■□□□□ 0.36
LYSMD4-211ENST00000604213 TTF1Q15361 905 aaPredicted RBP17.31■□□□□ 0.36
LYSMD4-211ENST00000604213 OXER1Q8TDS5 423 aa17.31■□□□□ 0.36
LYSMD4-211ENST00000604213 CEP131Q9UPN4 1083 aa17.31■□□□□ 0.36
LYSMD4-211ENST00000604213 RIPOR2Q9Y4F9 1068 aa17.31■□□□□ 0.36
LYSMD4-211ENST00000604213 TCRBV5S4A2TA0A5A2 114 aa17.31■□□□□ 0.36
LYSMD4-211ENST00000604213 PPP1R3GB7ZBB8 358 aa17.31■□□□□ 0.36
LYSMD4-211ENST00000604213 TUBBP07437 444 aa17.31■□□□□ 0.36
LYSMD4-211ENST00000604213 NOP2P46087 812 aaKnown RBP17.31■□□□□ 0.36
LYSMD4-211ENST00000604213 IFIT5Q13325 482 aaKnown RBP17.31■□□□□ 0.36
LYSMD4-211ENST00000604213 FILIP1LQ4L180 1135 aa17.31■□□□□ 0.36
LYSMD4-211ENST00000604213 METTL24Q5JXM2 366 aa17.31■□□□□ 0.36
LYSMD4-211ENST00000604213 TRIM22Q8IYM9 498 aa17.31■□□□□ 0.36
LYSMD4-211ENST00000604213 NOA1Q8NC60 698 aaKnown RBP17.31■□□□□ 0.36
LYSMD4-211ENST00000604213 PAGE5Q96GU1 130 aa17.31■□□□□ 0.36
LYSMD4-211ENST00000604213 ZFP91Q96JP5 570 aaPredicted RBP17.31■□□□□ 0.36
LYSMD4-211ENST00000604213 LRRIQ3A6PVS8 624 aaPredicted RBP17.3■□□□□ 0.36
LYSMD4-211ENST00000604213 ATP2B1P20020 1258 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms