RNA–Protein interactions for RNA: ENST00000603907.1

GRAMD1A-214, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 450 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-214ENST00000603907 DDX60LQ5H9U9 1706 aaKnown RBP24.88■■□□□ 1.57
GRAMD1A-214ENST00000603907 MYH1P12882 1939 aa24.87■■□□□ 1.57
GRAMD1A-214ENST00000603907 ALX1Q15699 326 aa24.87■■□□□ 1.57
GRAMD1A-214ENST00000603907 SBK1Q52WX2 424 aa24.87■■□□□ 1.57
GRAMD1A-214ENST00000603907 IFNL3Q8IZI9 196 aa24.87■■□□□ 1.57
GRAMD1A-214ENST00000603907 OPTNQ96CV9 577 aa24.87■■□□□ 1.57
GRAMD1A-214ENST00000603907 PTPN18Q99952 460 aa24.87■■□□□ 1.57
GRAMD1A-214ENST00000603907 TMEM106CQ9BVX2 250 aa24.87■■□□□ 1.57
GRAMD1A-214ENST00000603907 ELP3Q9H9T3 547 aa24.87■■□□□ 1.57
GRAMD1A-214ENST00000603907 HTTP42858 3142 aa24.87■■□□□ 1.57
GRAMD1A-214ENST00000603907 ZMYM6O95789 1325 aa24.86■■□□□ 1.57
GRAMD1A-214ENST00000603907 SGSM2O43147 1006 aa24.86■■□□□ 1.57
GRAMD1A-214ENST00000603907 TDO2P48775 406 aa24.86■■□□□ 1.57
GRAMD1A-214ENST00000603907 USP17L12C9JPN9 530 aa24.85■■□□□ 1.57
GRAMD1A-214ENST00000603907 USP17L21D6R901 530 aa24.85■■□□□ 1.57
GRAMD1A-214ENST00000603907 HSPD1P10809 573 aaKnown RBP24.85■■□□□ 1.57
GRAMD1A-214ENST00000603907 EN2P19622 333 aaPredicted RBP24.85■■□□□ 1.57
GRAMD1A-214ENST00000603907 NAPBQ9H115 298 aa24.85■■□□□ 1.57
GRAMD1A-214ENST00000603907 EPB41L4AQ9HCS5 686 aaPredicted RBP24.85■■□□□ 1.57
GRAMD1A-214ENST00000603907 SERPINB13Q9UIV8 391 aa24.85■■□□□ 1.57
GRAMD1A-214ENST00000603907 C12orf60Q5U649 245 aa24.84■■□□□ 1.57
GRAMD1A-214ENST00000603907 CTR9Q6PD62 1173 aa24.84■■□□□ 1.57
GRAMD1A-214ENST00000603907 MIGA2Q7L4E1 593 aa24.84■■□□□ 1.57
GRAMD1A-214ENST00000603907 NBPF11Q86T75 865 aa24.84■■□□□ 1.57
GRAMD1A-214ENST00000603907 CRACR2BQ8N4Y2 399 aaPredicted RBP24.84■■□□□ 1.57
GRAMD1A-214ENST00000603907 DSCC1Q9BVC3 393 aa24.84■■□□□ 1.57
GRAMD1A-214ENST00000603907 TRIM34Q9BYJ4 488 aa24.84■■□□□ 1.57
GRAMD1A-214ENST00000603907 ZNF112Q9UJU3 913 aa24.84■■□□□ 1.57
GRAMD1A-214ENST00000603907 FOXP2O15409 715 aa24.83■■□□□ 1.57
GRAMD1A-214ENST00000603907 PLCD1P51178 756 aa24.83■■□□□ 1.57
GRAMD1A-214ENST00000603907 VPS53Q5VIR6 699 aa24.83■■□□□ 1.57
GRAMD1A-214ENST00000603907 ESYT1Q9BSJ8 1104 aa24.83■■□□□ 1.57
GRAMD1A-214ENST00000603907 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.83■■□□□ 1.57
GRAMD1A-214ENST00000603907 ZFYVE28Q9HCC9 887 aa24.83■■□□□ 1.57
GRAMD1A-214ENST00000603907 GTF2A2P52657 109 aa24.82■■□□□ 1.56
GRAMD1A-214ENST00000603907 MAP3K9P80192 1104 aa24.82■■□□□ 1.56
GRAMD1A-214ENST00000603907 TAF1CQ15572 869 aaPredicted RBP24.82■■□□□ 1.56
GRAMD1A-214ENST00000603907 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.82■■□□□ 1.562e-6■■■□□ 17
GRAMD1A-214ENST00000603907 MS4A4AQ96JQ5 239 aa24.82■■□□□ 1.56
GRAMD1A-214ENST00000603907 SWAP70Q9UH65 585 aa24.82■■□□□ 1.56
GRAMD1A-214ENST00000603907 BAZ2AQ9UIF9 1905 aaKnown RBP24.81■■□□□ 1.56
GRAMD1A-214ENST00000603907 GABPAQ06546 454 aa24.81■■□□□ 1.56
GRAMD1A-214ENST00000603907 SLC9C1Q4G0N8 1177 aa24.81■■□□□ 1.56
GRAMD1A-214ENST00000603907 ZNF333Q96JL9 665 aa24.81■■□□□ 1.56
GRAMD1A-214ENST00000603907 WRNIP1Q96S55 665 aa24.81■■□□□ 1.56
GRAMD1A-214ENST00000603907 IL25Q9H293 177 aa24.81■■□□□ 1.56
GRAMD1A-214ENST00000603907 CSADQ9Y600 493 aa24.81■■□□□ 1.56
GRAMD1A-214ENST00000603907 CCL15-CCL14A0A0B4J2E2 113 aa24.8■■□□□ 1.56
GRAMD1A-214ENST00000603907 PHF20L1A8MW92 1017 aa24.8■■□□□ 1.56
GRAMD1A-214ENST00000603907 FGAP02671 866 aa24.8■■□□□ 1.56
GRAMD1A-214ENST00000603907 CCL15Q16663 113 aa24.8■■□□□ 1.56
GRAMD1A-214ENST00000603907 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.8■■□□□ 1.56
GRAMD1A-214ENST00000603907 KIAA1211Q6ZU35 1233 aa24.8■■□□□ 1.56
GRAMD1A-214ENST00000603907 ROBO3Q96MS0 1386 aa24.8■■□□□ 1.56
GRAMD1A-214ENST00000603907 SIPA1L1O43166 1804 aa24.79■■□□□ 1.56
GRAMD1A-214ENST00000603907 SLC3A2P08195 630 aaKnown RBP24.79■■□□□ 1.56
GRAMD1A-214ENST00000603907 CYP2D6P10635 497 aa24.79■■□□□ 1.56
GRAMD1A-214ENST00000603907 BRI3BPQ8WY22 251 aa24.79■■□□□ 1.56
GRAMD1A-214ENST00000603907 GINM1Q9NU53 330 aa24.79■■□□□ 1.56
GRAMD1A-214ENST00000603907 CTNNA3Q9UI47 895 aa24.79■■□□□ 1.56
GRAMD1A-214ENST00000603907 MINDY4BA8MYZ0 360 aa24.78■■□□□ 1.56
GRAMD1A-214ENST00000603907 CTNND1O60716 968 aaKnown RBP24.78■■□□□ 1.56
GRAMD1A-214ENST00000603907 CAP1Q01518 475 aa24.78■■□□□ 1.56
GRAMD1A-214ENST00000603907 VGLL4Q14135 290 aa24.78■■□□□ 1.56
GRAMD1A-214ENST00000603907 SLC4A8Q2Y0W8 1093 aa24.78■■□□□ 1.56
GRAMD1A-214ENST00000603907 NOL9Q5SY16 702 aaKnown RBP24.78■■□□□ 1.56
GRAMD1A-214ENST00000603907 TATDN1Q6P1N9 297 aa24.78■■□□□ 1.56
GRAMD1A-214ENST00000603907 C16orf86Q6ZW13 317 aa24.78■■□□□ 1.56
GRAMD1A-214ENST00000603907 DNAJC18Q9H819 358 aa24.78■■□□□ 1.56
GRAMD1A-214ENST00000603907 ZNF287Q9HBT7 754 aa24.78■■□□□ 1.56
GRAMD1A-214ENST00000603907 PTCH2Q9Y6C5 1203 aa24.78■■□□□ 1.56
GRAMD1A-214ENST00000603907 MKI67P46013 3256 aaKnown RBP24.77■■□□□ 1.56
GRAMD1A-214ENST00000603907 PPARAQ07869 468 aa24.77■■□□□ 1.56
GRAMD1A-214ENST00000603907 CNKSR2Q8WXI2 1034 aa24.77■■□□□ 1.56
GRAMD1A-214ENST00000603907 OTUD5Q96G74 571 aa24.77■■□□□ 1.56
GRAMD1A-214ENST00000603907 ANAPC4Q9UJX5 808 aa24.77■■□□□ 1.56
GRAMD1A-214ENST00000603907 CENPFP49454 3210 aa24.76■■□□□ 1.55
GRAMD1A-214ENST00000603907 CYP2D7A0A087X1C5 515 aa24.76■■□□□ 1.55
GRAMD1A-214ENST00000603907 KIF22Q14807 665 aa24.76■■□□□ 1.55
GRAMD1A-214ENST00000603907 FAM196BA6NMK8 535 aa24.75■■□□□ 1.55
GRAMD1A-214ENST00000603907 INPP5BP32019 993 aa24.75■■□□□ 1.55
GRAMD1A-214ENST00000603907 CAP2P40123 477 aa24.75■■□□□ 1.55
GRAMD1A-214ENST00000603907 SCYL3Q8IZE3 742 aa24.75■■□□□ 1.55
GRAMD1A-214ENST00000603907 FAM43AQ8N2R8 423 aa24.75■■□□□ 1.55
GRAMD1A-214ENST00000603907 U3KPZ7 1027 aaPredicted RBP24.75■■□□□ 1.55
GRAMD1A-214ENST00000603907 EIF5BO60841 1220 aaKnown RBP24.74■■□□□ 1.55
GRAMD1A-214ENST00000603907 SLURP2P0DP57 97 aa24.74■■□□□ 1.55
GRAMD1A-214ENST00000603907 SHMT1P34896 483 aa24.74■■□□□ 1.55
GRAMD1A-214ENST00000603907 CDK8P49336 464 aa24.74■■□□□ 1.55
GRAMD1A-214ENST00000603907 FXR1P51114 621 aaKnown RBP eCLIP24.74■■□□□ 1.55
GRAMD1A-214ENST00000603907 PDE4BQ07343 736 aa24.74■■□□□ 1.55
GRAMD1A-214ENST00000603907 MAP4K1Q92918 833 aa24.74■■□□□ 1.55
GRAMD1A-214ENST00000603907 DYNLL2Q96FJ2 89 aa24.74■■□□□ 1.55
GRAMD1A-214ENST00000603907 CCDC17Q96LX7 622 aa24.74■■□□□ 1.55
GRAMD1A-214ENST00000603907 PCP11498 1178 aaKnown RBP24.73■■□□□ 1.55
GRAMD1A-214ENST00000603907 CETPP11597 493 aa24.73■■□□□ 1.55
GRAMD1A-214ENST00000603907 EVX2Q03828 476 aa24.73■■□□□ 1.55
GRAMD1A-214ENST00000603907 IMMTQ16891 758 aaKnown RBP24.73■■□□□ 1.55
GRAMD1A-214ENST00000603907 CERKLQ49MI3 558 aaPredicted RBP24.73■■□□□ 1.55
GRAMD1A-214ENST00000603907 ZKSCAN4Q969J2 545 aaPredicted RBP24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms