RNA–Protein interactions for RNA: ENST00000602888.5

UBE2E3-212, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 2

Gene UBE2E3, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-212ENST00000602888 EHMT1Q9H9B1 1298 aa7.78□□□□□ -1.16
UBE2E3-212ENST00000602888 CST3P01034 146 aaPredicted RBP7.77□□□□□ -1.17
UBE2E3-212ENST00000602888 YARSP54577 528 aaKnown RBP7.77□□□□□ -1.17
UBE2E3-212ENST00000602888 CYP27A1Q02318 531 aa7.77□□□□□ -1.17
UBE2E3-212ENST00000602888 CLCQ05315 142 aa7.77□□□□□ -1.17
UBE2E3-212ENST00000602888 PRAMEF13Q5VWM6 474 aa7.77□□□□□ -1.17
UBE2E3-212ENST00000602888 TOP6BLQ8N6T0 577 aa7.77□□□□□ -1.17
UBE2E3-212ENST00000602888 SHKBP1Q8TBC3 707 aa7.77□□□□□ -1.17
UBE2E3-212ENST00000602888 DPH2Q9BQC3 489 aaPredicted RBP7.77□□□□□ -1.17
UBE2E3-212ENST00000602888 ATG3Q9NT62 314 aa7.77□□□□□ -1.17
UBE2E3-212ENST00000602888 GINM1Q9NU53 330 aa7.77□□□□□ -1.17
UBE2E3-212ENST00000602888 EFR3BQ9Y2G0 817 aa7.77□□□□□ -1.17
UBE2E3-212ENST00000602888 WDR64B1ANS9 1081 aa7.76□□□□□ -1.17
UBE2E3-212ENST00000602888 F13BP05160 661 aa7.76□□□□□ -1.17
UBE2E3-212ENST00000602888 FAM87AP0C7U9 286 aa7.76□□□□□ -1.17
UBE2E3-212ENST00000602888 ZC3H6P61129 1189 aaKnown RBP7.76□□□□□ -1.17
UBE2E3-212ENST00000602888 OGFOD3Q6PK18 319 aa7.76□□□□□ -1.17
UBE2E3-212ENST00000602888 MFSD2AQ8NA29 543 aa7.76□□□□□ -1.17
UBE2E3-212ENST00000602888 FAM13CQ8NE31 585 aa7.76□□□□□ -1.17
UBE2E3-212ENST00000602888 FERD3LQ96RJ6 166 aa7.76□□□□□ -1.17
UBE2E3-212ENST00000602888 TINF2Q9BSI4 451 aa7.76□□□□□ -1.17
UBE2E3-212ENST00000602888 METTL22Q9BUU2 404 aaPredicted RBP7.76□□□□□ -1.17
UBE2E3-212ENST00000602888 DUSP23Q9BVJ7 150 aa7.76□□□□□ -1.17
UBE2E3-212ENST00000602888 PRDM10Q9NQV6 1147 aa7.76□□□□□ -1.17
UBE2E3-212ENST00000602888 KLHL3Q9UH77 587 aa7.76□□□□□ -1.17
UBE2E3-212ENST00000602888 FAM170BA6NMN3 283 aa7.75□□□□□ -1.17
UBE2E3-212ENST00000602888 IMPDH2P12268 514 aa7.75□□□□□ -1.17
UBE2E3-212ENST00000602888 SOX9P48436 509 aa7.75□□□□□ -1.17
UBE2E3-212ENST00000602888 CPSF6Q16630 551 aaKnown RBP eCLIP7.75□□□□□ -1.17
UBE2E3-212ENST00000602888 DUSP27Q5VZP5 1158 aa7.75□□□□□ -1.17
UBE2E3-212ENST00000602888 ZNF765Q7L2R6 523 aa7.75□□□□□ -1.17
UBE2E3-212ENST00000602888 SHISA5Q8N114 240 aa7.75□□□□□ -1.17
UBE2E3-212ENST00000602888 OSBPL1AQ9BXW6 950 aa7.75□□□□□ -1.17
UBE2E3-212ENST00000602888 GMIPQ9P107 970 aa7.75□□□□□ -1.17
UBE2E3-212ENST00000602888 ZNRF3Q9ULT6 936 aa7.75□□□□□ -1.17
UBE2E3-212ENST00000602888 DNAJA2O60884 412 aa7.74□□□□□ -1.17
UBE2E3-212ENST00000602888 ADAM23O75077 832 aa7.74□□□□□ -1.17
UBE2E3-212ENST00000602888 LEFTY1O75610 366 aa7.74□□□□□ -1.17
UBE2E3-212ENST00000602888 LRRFIP1Q32MZ4 808 aaKnown RBP7.74□□□□□ -1.17
UBE2E3-212ENST00000602888 CYP27C1Q4G0S4 372 aa7.74□□□□□ -1.17
UBE2E3-212ENST00000602888 VPS37DQ86XT2 251 aa7.74□□□□□ -1.17
UBE2E3-212ENST00000602888 ZDHHC13Q8IUH4 622 aa7.74□□□□□ -1.17
UBE2E3-212ENST00000602888 SLFN12Q8IYM2 578 aa7.74□□□□□ -1.17
UBE2E3-212ENST00000602888 XAGE3Q8WTP9 111 aa7.74□□□□□ -1.17
UBE2E3-212ENST00000602888 SEC16BQ96JE7 1060 aa7.74□□□□□ -1.17
UBE2E3-212ENST00000602888 MIPEPQ99797 713 aa7.74□□□□□ -1.17
UBE2E3-212ENST00000602888 PPT2Q9UMR5 302 aa7.74□□□□□ -1.17
UBE2E3-212ENST00000602888 SLC22A31A6NKX4 558 aa7.73□□□□□ -1.17
UBE2E3-212ENST00000602888 UPK3BL1B0FP48 263 aa7.73□□□□□ -1.17
UBE2E3-212ENST00000602888 CHURC1-FNTBB4DL54 471 aa7.73□□□□□ -1.17
UBE2E3-212ENST00000602888 UPK3BL2E5RIL1 263 aa7.73□□□□□ -1.17
UBE2E3-212ENST00000602888 ITGB7P26010 798 aa7.73□□□□□ -1.17
UBE2E3-212ENST00000602888 NASPP49321 788 aaPredicted RBP7.73□□□□□ -1.17
UBE2E3-212ENST00000602888 FBXW10Q5XX13 1052 aa7.73□□□□□ -1.17
UBE2E3-212ENST00000602888 OVOS1Q6IE37 1185 aa7.73□□□□□ -1.17
UBE2E3-212ENST00000602888 LETMD1Q6P1Q0 360 aa7.73□□□□□ -1.17
UBE2E3-212ENST00000602888 MEIS3P2A8K0S8 358 aa7.72□□□□□ -1.17
UBE2E3-212ENST00000602888 SLITRK5O94991 958 aa7.72□□□□□ -1.17
UBE2E3-212ENST00000602888 ATF4P18848 351 aaPredicted RBP7.72□□□□□ -1.17
UBE2E3-212ENST00000602888 CYB5D2Q8WUJ1 264 aa7.72□□□□□ -1.17
UBE2E3-212ENST00000602888 TMEM40Q8WWA1 233 aa7.72□□□□□ -1.17
UBE2E3-212ENST00000602888 LEMD3Q9Y2U8 911 aa7.72□□□□□ -1.17
UBE2E3-212ENST00000602888 NAALADL2Q58DX5 795 aa7.71□□□□□ -1.18
UBE2E3-212ENST00000602888 ARSHQ5FYA8 562 aa7.71□□□□□ -1.18
UBE2E3-212ENST00000602888 CCDC81Q6ZN84 652 aa7.71□□□□□ -1.18
UBE2E3-212ENST00000602888 PHACTR4Q8IZ21 702 aa7.71□□□□□ -1.18
UBE2E3-212ENST00000602888 SLC43A3Q8NBI5 491 aa7.71□□□□□ -1.18
UBE2E3-212ENST00000602888 C8orf37Q96NL8 207 aa7.71□□□□□ -1.18
UBE2E3-212ENST00000602888 ANTXR1Q9H6X2 564 aa7.71□□□□□ -1.18
UBE2E3-212ENST00000602888 PIM2Q9P1W9 311 aa7.71□□□□□ -1.18
UBE2E3-212ENST00000602888 STRIP2Q9ULQ0 834 aa7.71□□□□□ -1.18
UBE2E3-212ENST00000602888 PRR19A6NJB7 356 aa7.7□□□□□ -1.18
UBE2E3-212ENST00000602888 EOMESO95936 686 aa7.7□□□□□ -1.18
UBE2E3-212ENST00000602888 TGFB1P01137 390 aa7.7□□□□□ -1.18
UBE2E3-212ENST00000602888 RAG1P15918 1043 aa7.7□□□□□ -1.18
UBE2E3-212ENST00000602888 ARID5AQ03989 594 aa7.7□□□□□ -1.18
UBE2E3-212ENST00000602888 CDCP2Q5VXM1 449 aa7.7□□□□□ -1.18
UBE2E3-212ENST00000602888 ZNF746Q6NUN9 644 aaPredicted RBP7.7□□□□□ -1.18
UBE2E3-212ENST00000602888 NLRC3Q7RTR2 1065 aa7.7□□□□□ -1.18
UBE2E3-212ENST00000602888 CPLX3Q8WVH0 158 aa7.7□□□□□ -1.18
UBE2E3-212ENST00000602888 ATG4CQ96DT6 458 aa7.7□□□□□ -1.18
UBE2E3-212ENST00000602888 CRBNQ96SW2 442 aa7.7□□□□□ -1.18
UBE2E3-212ENST00000602888 SRRTQ9BXP5 876 aaKnown RBP7.7□□□□□ -1.18
UBE2E3-212ENST00000602888 GTF2IRD1Q9UHL9 959 aa7.7□□□□□ -1.18
UBE2E3-212ENST00000602888 TPX2Q9ULW0 747 aaKnown RBP7.7□□□□□ -1.18
UBE2E3-212ENST00000602888 EIF6P56537 245 aaKnown RBP7.69□□□□□ -1.18
UBE2E3-212ENST00000602888 RBBP8NLQ8NC74 664 aaPredicted RBP7.69□□□□□ -1.18
UBE2E3-212ENST00000602888 CCDC74BQ96LY2 380 aa7.69□□□□□ -1.18
UBE2E3-212ENST00000602888 CNNM2Q9H8M5 875 aa7.69□□□□□ -1.18
UBE2E3-212ENST00000602888 LRRC4CQ9HCJ2 640 aa7.69□□□□□ -1.18
UBE2E3-212ENST00000602888 PRDM5Q9NQX1 630 aaPredicted RBP7.69□□□□□ -1.18
UBE2E3-212ENST00000602888 RNF112Q9ULX5 631 aa7.69□□□□□ -1.18
UBE2E3-212ENST00000602888 CYP26A1O43174 497 aa7.68□□□□□ -1.18
UBE2E3-212ENST00000602888 DNAJA1P31689 397 aaKnown RBP7.68□□□□□ -1.18
UBE2E3-212ENST00000602888 ETV3P41162 512 aa7.68□□□□□ -1.18
UBE2E3-212ENST00000602888 CDH24Q86UP0 819 aa7.68□□□□□ -1.18
UBE2E3-212ENST00000602888 DNAJB8Q8NHS0 232 aa7.68□□□□□ -1.18
UBE2E3-212ENST00000602888 RIN3Q8TB24 985 aa7.68□□□□□ -1.18
UBE2E3-212ENST00000602888 KIF2CQ99661 725 aa7.68□□□□□ -1.18
UBE2E3-212ENST00000602888 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms