RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 CCDC17Q96LX7 622 aa16.54■□□□□ 0.24
RNF40-212ENST00000602784 IL25Q9H293 177 aa16.54■□□□□ 0.24
RNF40-212ENST00000602784 ANAPC4Q9UJX5 808 aa16.54■□□□□ 0.24
RNF40-212ENST00000602784 DOCK1Q14185 1865 aa16.54■□□□□ 0.24
RNF40-212ENST00000602784 MANSC4A6NHS7 340 aaPredicted RBP16.53■□□□□ 0.24
RNF40-212ENST00000602784 CDC45O75419 566 aa16.53■□□□□ 0.24
RNF40-212ENST00000602784 GTF2A2P52657 109 aa16.53■□□□□ 0.24
RNF40-212ENST00000602784 KIF23Q02241 960 aaPredicted RBP16.53■□□□□ 0.24
RNF40-212ENST00000602784 CASC1Q6TDU7 716 aa16.53■□□□□ 0.24
RNF40-212ENST00000602784 CNKSR2Q8WXI2 1034 aa16.53■□□□□ 0.24
RNF40-212ENST00000602784 OTUD5Q96G74 571 aa16.53■□□□□ 0.24
RNF40-212ENST00000602784 CTNNA3Q9UI47 895 aa16.53■□□□□ 0.24
RNF40-212ENST00000602784 KCNH4Q9UQ05 1017 aa16.53■□□□□ 0.24
RNF40-212ENST00000602784 ZHX2Q9Y6X8 837 aa16.53■□□□□ 0.24
RNF40-212ENST00000602784 LAMB1P07942 1786 aa16.52■□□□□ 0.24
RNF40-212ENST00000602784 USP17L5A8MUK1 530 aa16.52■□□□□ 0.24
RNF40-212ENST00000602784 SMIM22K7EJ46 135 aa16.52■□□□□ 0.24
RNF40-212ENST00000602784 CXCL11O14625 94 aa16.52■□□□□ 0.24
RNF40-212ENST00000602784 TM4SF4P48230 202 aa16.52■□□□□ 0.24
RNF40-212ENST00000602784 MAP2K1Q02750 393 aaPredicted RBP16.52■□□□□ 0.24
RNF40-212ENST00000602784 PDE4BQ07343 736 aa16.52■□□□□ 0.24
RNF40-212ENST00000602784 SREBF2Q12772 1141 aa16.52■□□□□ 0.24
RNF40-212ENST00000602784 ABCB5Q2M3G0 1257 aa16.52■□□□□ 0.24
RNF40-212ENST00000602784 SLC44A5Q8NCS7 719 aa16.52■□□□□ 0.24
RNF40-212ENST00000602784 MS4A4AQ96JQ5 239 aa16.52■□□□□ 0.24
RNF40-212ENST00000602784 ZIC5Q96T25 663 aa16.52■□□□□ 0.24
RNF40-212ENST00000602784 ESYT1Q9BSJ8 1104 aa16.52■□□□□ 0.24
RNF40-212ENST00000602784 CABP5Q9NP86 173 aa16.52■□□□□ 0.24
RNF40-212ENST00000602784 ZBTB21Q9ULJ3 1066 aa16.52■□□□□ 0.24
RNF40-212ENST00000602784 AFG3L2Q9Y4W6 797 aa16.52■□□□□ 0.24
RNF40-212ENST00000602784 TESPA1A2RU30 521 aaPredicted RBP16.51■□□□□ 0.23
RNF40-212ENST00000602784 IRF6O14896 467 aa16.51■□□□□ 0.23
RNF40-212ENST00000602784 GH2P01242 217 aa16.51■□□□□ 0.23
RNF40-212ENST00000602784 FGRP09769 529 aa16.51■□□□□ 0.23
RNF40-212ENST00000602784 JAG1P78504 1218 aa16.51■□□□□ 0.23
RNF40-212ENST00000602784 SNAPC2Q13487 334 aa16.51■□□□□ 0.23
RNF40-212ENST00000602784 WDR18Q9BV38 432 aa16.51■□□□□ 0.23
RNF40-212ENST00000602784 MKNK2Q9HBH9 465 aa16.51■□□□□ 0.23
RNF40-212ENST00000602784 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.51■□□□□ 0.23
RNF40-212ENST00000602784 GDF11O95390 407 aa16.5■□□□□ 0.23
RNF40-212ENST00000602784 PCP11498 1178 aaKnown RBP16.5■□□□□ 0.23
RNF40-212ENST00000602784 CETPP11597 493 aa16.5■□□□□ 0.23
RNF40-212ENST00000602784 MKRN3Q13064 507 aaKnown RBP16.5■□□□□ 0.23
RNF40-212ENST00000602784 KIAA1211Q6ZU35 1233 aa16.5■□□□□ 0.23
RNF40-212ENST00000602784 TMEM179Q6ZVK1 233 aa16.5■□□□□ 0.23
RNF40-212ENST00000602784 ZNF280CQ8ND82 737 aa16.5■□□□□ 0.23
RNF40-212ENST00000602784 AS3MTQ9HBK9 375 aa16.5■□□□□ 0.23
RNF40-212ENST00000602784 ATAD5Q96QE3 1844 aa16.49■□□□□ 0.23
RNF40-212ENST00000602784 RASA1P20936 1047 aa16.49■□□□□ 0.23
RNF40-212ENST00000602784 ZNF444Q8N0Y2 327 aaPredicted RBP16.49■□□□□ 0.23
RNF40-212ENST00000602784 MAP4K1Q92918 833 aa16.49■□□□□ 0.23
RNF40-212ENST00000602784 WBP1LQ9NX94 342 aa16.49■□□□□ 0.23
RNF40-212ENST00000602784 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.49■□□□□ 0.23
RNF40-212ENST00000602784 U3KPZ7 1027 aaPredicted RBP16.49■□□□□ 0.23
RNF40-212ENST00000602784 PHIPQ8WWQ0 1821 aa16.48■□□□□ 0.23
RNF40-212ENST00000602784 ZNF213O14771 459 aa16.48■□□□□ 0.23
RNF40-212ENST00000602784 ORC4O43929 436 aa16.48■□□□□ 0.23
RNF40-212ENST00000602784 GUCY1A2P33402 732 aa16.48■□□□□ 0.23
RNF40-212ENST00000602784 NT5C2P49902 561 aa16.48■□□□□ 0.23
RNF40-212ENST00000602784 PTH1RQ03431 593 aa16.48■□□□□ 0.23
RNF40-212ENST00000602784 IMMTQ16891 758 aaKnown RBP16.48■□□□□ 0.23
RNF40-212ENST00000602784 SHROOM1Q2M3G4 852 aaPredicted RBP16.48■□□□□ 0.23
RNF40-212ENST00000602784 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.48■□□□□ 0.23
RNF40-212ENST00000602784 MYH8P13535 1937 aa16.48■□□□□ 0.23
RNF40-212ENST00000602784 CCL15-CCL14A0A0B4J2E2 113 aa16.47■□□□□ 0.23
RNF40-212ENST00000602784 A0A0G2JLL6 359 aaPredicted RBP16.47■□□□□ 0.23
RNF40-212ENST00000602784 C19orf81C9J6K1 198 aa16.47■□□□□ 0.23
RNF40-212ENST00000602784 MPHOSPH10O00566 681 aaKnown RBP16.47■□□□□ 0.23
RNF40-212ENST00000602784 CA12O43570 354 aa16.47■□□□□ 0.23
RNF40-212ENST00000602784 AKR1B1P15121 316 aa16.47■□□□□ 0.23
RNF40-212ENST00000602784 BACE1P56817 501 aa16.47■□□□□ 0.23
RNF40-212ENST00000602784 CTDSPL2Q05D32 466 aa16.47■□□□□ 0.23
RNF40-212ENST00000602784 SPP2Q13103 211 aa16.47■□□□□ 0.23
RNF40-212ENST00000602784 RAB3GAP1Q15042 981 aa16.47■□□□□ 0.23
RNF40-212ENST00000602784 CCL15Q16663 113 aa16.47■□□□□ 0.23
RNF40-212ENST00000602784 OTUD7BQ6GQQ9 843 aa16.47■□□□□ 0.23
RNF40-212ENST00000602784 FASTKD5Q7L8L6 764 aaKnown RBP16.47■□□□□ 0.23
RNF40-212ENST00000602784 PRRT2Q7Z6L0 340 aaPredicted RBP16.47■□□□□ 0.23
RNF40-212ENST00000602784 STAG1Q8WVM7 1258 aa16.47■□□□□ 0.23
RNF40-212ENST00000602784 BRI3BPQ8WY22 251 aa16.47■□□□□ 0.23
RNF40-212ENST00000602784 LSG1Q9H089 658 aaKnown RBP16.47■□□□□ 0.23
RNF40-212ENST00000602784 RNF41Q9H4P4 317 aaPredicted RBP16.47■□□□□ 0.23
RNF40-212ENST00000602784 KANSL2Q9H9L4 492 aa16.47■□□□□ 0.23
RNF40-212ENST00000602784 ZCCHC17Q9NP64 241 aaKnown RBP16.47■□□□□ 0.23
RNF40-212ENST00000602784 TRIM75PA6NK02 468 aa16.46■□□□□ 0.23
RNF40-212ENST00000602784 USP17L10C9JJH3 530 aa16.46■□□□□ 0.23
RNF40-212ENST00000602784 ALDH1A1P00352 501 aa16.46■□□□□ 0.23
RNF40-212ENST00000602784 SEPT2Q15019 361 aa16.46■□□□□ 0.23
RNF40-212ENST00000602784 SH3D19Q5HYK7 790 aa16.46■□□□□ 0.23
RNF40-212ENST00000602784 AKNAD1Q5T1N1 836 aa16.46■□□□□ 0.23
RNF40-212ENST00000602784 CCDC84Q86UT8 332 aaPredicted RBP16.46■□□□□ 0.23
RNF40-212ENST00000602784 IFNL1Q8IU54 200 aa16.46■□□□□ 0.23
RNF40-212ENST00000602784 STK11IPQ8N1F8 1099 aa16.46■□□□□ 0.23
RNF40-212ENST00000602784 PTPN18Q99952 460 aa16.46■□□□□ 0.23
RNF40-212ENST00000602784 BEGAINQ9BUH8 593 aa16.46■□□□□ 0.23
RNF40-212ENST00000602784 NBPF3Q9H094 633 aa16.46■□□□□ 0.23
RNF40-212ENST00000602784 SAGE1Q9NXZ1 904 aa16.46■□□□□ 0.23
RNF40-212ENST00000602784 GTF3C3Q9Y5Q9 886 aa16.46■□□□□ 0.23
RNF40-212ENST00000602784 PCNTO95613 3336 aa16.46■□□□□ 0.23
RNF40-212ENST00000602784 PRDM1O75626 825 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms