RNA–Protein interactions for RNA: ENST00000602086.5

ZNF548-212, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-212ENST00000602086 SPDYE2Q495Y8 402 aa16.85■□□□□ 0.29
ZNF548-212ENST00000602086 SYNE3Q6ZMZ3 975 aa16.85■□□□□ 0.29
ZNF548-212ENST00000602086 CLEC17AQ6ZS10 378 aa16.85■□□□□ 0.29
ZNF548-212ENST00000602086 DGKHQ86XP1 1220 aa16.85■□□□□ 0.29
ZNF548-212ENST00000602086 ZNF444Q8N0Y2 327 aaPredicted RBP16.85■□□□□ 0.29
ZNF548-212ENST00000602086 FAM198AQ9UFP1 575 aa16.85■□□□□ 0.29
ZNF548-212ENST00000602086 SERPINB13Q9UIV8 391 aa16.85■□□□□ 0.29
ZNF548-212ENST00000602086 KIF3AQ9Y496 699 aa16.85■□□□□ 0.29
ZNF548-212ENST00000602086 TNKSO95271 1327 aa16.85■□□□□ 0.29
ZNF548-212ENST00000602086 MYH8P13535 1937 aa16.84■□□□□ 0.29
ZNF548-212ENST00000602086 TSPY2A6NKD2 308 aa16.84■□□□□ 0.29
ZNF548-212ENST00000602086 GOLGA8BA8MQT2 603 aa16.84■□□□□ 0.29
ZNF548-212ENST00000602086 ZBTB43O43298 467 aa16.84■□□□□ 0.29
ZNF548-212ENST00000602086 PRDM1O75626 825 aa16.84■□□□□ 0.29
ZNF548-212ENST00000602086 BRD1O95696 1058 aa16.84■□□□□ 0.29
ZNF548-212ENST00000602086 RASA1P20936 1047 aa16.84■□□□□ 0.29
ZNF548-212ENST00000602086 GJB2P29033 226 aa16.84■□□□□ 0.29
ZNF548-212ENST00000602086 NOVP48745 357 aa16.84■□□□□ 0.29
ZNF548-212ENST00000602086 EVX2Q03828 476 aa16.84■□□□□ 0.29
ZNF548-212ENST00000602086 NFIAQ12857 509 aa16.84■□□□□ 0.29
ZNF548-212ENST00000602086 PICALMQ13492 652 aa16.84■□□□□ 0.29
ZNF548-212ENST00000602086 FOXP4Q8IVH2 680 aaPredicted RBP16.84■□□□□ 0.29
ZNF548-212ENST00000602086 ENAHQ8N8S7 591 aaPredicted RBP16.84■□□□□ 0.29
ZNF548-212ENST00000602086 SMC1BQ8NDV3 1235 aa16.84■□□□□ 0.29
ZNF548-212ENST00000602086 NSUN7Q8NE18 718 aaKnown RBP16.84■□□□□ 0.29
ZNF548-212ENST00000602086 NEDD1Q8NHV4 660 aa16.84■□□□□ 0.29
ZNF548-212ENST00000602086 DYNLL2Q96FJ2 89 aa16.84■□□□□ 0.29
ZNF548-212ENST00000602086 TDRD3Q9H7E2 651 aaKnown RBP16.84■□□□□ 0.29
ZNF548-212ENST00000602086 PI4KBQ9UBF8 816 aa16.84■□□□□ 0.29
ZNF548-212ENST00000602086 ZBTB12Q9Y330 459 aaPredicted RBP16.84■□□□□ 0.29
ZNF548-212ENST00000602086 SLC12A7Q9Y666 1083 aa16.84■□□□□ 0.29
ZNF548-212ENST00000602086 SIPA1L1O43166 1804 aa16.83■□□□□ 0.28
ZNF548-212ENST00000602086 MYO1BO43795 1136 aa16.83■□□□□ 0.28
ZNF548-212ENST00000602086 CALM1P0DP23 149 aa16.83■□□□□ 0.28
ZNF548-212ENST00000602086 CALM2P0DP24 149 aa16.83■□□□□ 0.28
ZNF548-212ENST00000602086 CALM3P0DP25 149 aa16.83■□□□□ 0.28
ZNF548-212ENST00000602086 TFAP4Q01664 338 aa16.83■□□□□ 0.28
ZNF548-212ENST00000602086 STK3Q13188 491 aa16.83■□□□□ 0.28
ZNF548-212ENST00000602086 NFXL1Q6ZNB6 911 aa16.83■□□□□ 0.28
ZNF548-212ENST00000602086 FAM83AQ86UY5 434 aa16.83■□□□□ 0.28
ZNF548-212ENST00000602086 MAP3K14Q99558 947 aa16.83■□□□□ 0.28
ZNF548-212ENST00000602086 WDR33Q9C0J8 1336 aaKnown RBP16.83■□□□□ 0.28
ZNF548-212ENST00000602086 ZNF70Q9UC06 446 aaPredicted RBP16.83■□□□□ 0.28
ZNF548-212ENST00000602086 PCDHAC2Q9Y5I4 1007 aa16.83■□□□□ 0.28
ZNF548-212ENST00000602086 CCDC196A0A1B0GTZ2 297 aa16.82■□□□□ 0.28
ZNF548-212ENST00000602086 CDKL5O76039 1030 aa16.82■□□□□ 0.28
ZNF548-212ENST00000602086 DDAH1O94760 285 aa16.82■□□□□ 0.28
ZNF548-212ENST00000602086 METAP2P50579 478 aaKnown RBP eCLIP16.82■□□□□ 0.28
ZNF548-212ENST00000602086 PPP4R3BQ5MIZ7 849 aa16.82■□□□□ 0.28
ZNF548-212ENST00000602086 IFIT1BQ5T764 474 aaKnown RBP16.82■□□□□ 0.28
ZNF548-212ENST00000602086 CPLX2Q6PUV4 134 aaKnown RBP16.82■□□□□ 0.28
ZNF548-212ENST00000602086 STK11IPQ8N1F8 1099 aa16.82■□□□□ 0.28
ZNF548-212ENST00000602086 JMYQ8N9B5 988 aa16.82■□□□□ 0.28
ZNF548-212ENST00000602086 FAM151AQ8WW52 585 aa16.82■□□□□ 0.28
ZNF548-212ENST00000602086 CCDC17Q96LX7 622 aa16.82■□□□□ 0.28
ZNF548-212ENST00000602086 MYOZ2Q9NPC6 264 aa16.82■□□□□ 0.28
ZNF548-212ENST00000602086 GREB1LQ9C091 1923 aaPredicted RBP16.81■□□□□ 0.28
ZNF548-212ENST00000602086 CTDNEP1O95476 244 aa16.81■□□□□ 0.28
ZNF548-212ENST00000602086 TSPY3P0CV98 308 aa16.81■□□□□ 0.28
ZNF548-212ENST00000602086 TSPY8P0CW00 308 aa16.81■□□□□ 0.28
ZNF548-212ENST00000602086 SYT1P21579 422 aa16.81■□□□□ 0.28
ZNF548-212ENST00000602086 CATIPQ7Z7H3 387 aa16.81■□□□□ 0.28
ZNF548-212ENST00000602086 ZNF654Q8IZM8 581 aa16.81■□□□□ 0.28
ZNF548-212ENST00000602086 GPC2Q8N158 579 aa16.81■□□□□ 0.28
ZNF548-212ENST00000602086 ZKSCAN3Q9BRR0 538 aa16.81■□□□□ 0.28
ZNF548-212ENST00000602086 SENP2Q9HC62 589 aa16.81■□□□□ 0.28
ZNF548-212ENST00000602086 GLTPD2A6NH11 291 aa16.8■□□□□ 0.28
ZNF548-212ENST00000602086 GOLGA8AA7E2F4 631 aa16.8■□□□□ 0.28
ZNF548-212ENST00000602086 STX6O43752 255 aa16.8■□□□□ 0.28
ZNF548-212ENST00000602086 GMPSP49915 693 aaPredicted RBP16.8■□□□□ 0.28
ZNF548-212ENST00000602086 CCT2P78371 535 aaKnown RBP16.8■□□□□ 0.28
ZNF548-212ENST00000602086 FAM47AQ5JRC9 791 aa16.8■□□□□ 0.28
ZNF548-212ENST00000602086 RCSD1Q6JBY9 416 aa16.8■□□□□ 0.28
ZNF548-212ENST00000602086 TNPO1Q92973 898 aaKnown RBP16.8■□□□□ 0.28
ZNF548-212ENST00000602086 NAP1L2Q9ULW6 460 aaPredicted RBP16.8■□□□□ 0.28
ZNF548-212ENST00000602086 ZDHHC9Q9Y397 364 aa16.8■□□□□ 0.28
ZNF548-212ENST00000602086 STK36Q9NRP7 1315 aa16.79■□□□□ 0.28
ZNF548-212ENST00000602086 ZC3H4Q9UPT8 1303 aaKnown RBP16.79■□□□□ 0.28
ZNF548-212ENST00000602086 PTPDC1A2A3K4 754 aa16.79■□□□□ 0.28
ZNF548-212ENST00000602086 DDTLA6NHG4 134 aaPredicted RBP16.79■□□□□ 0.28
ZNF548-212ENST00000602086 WNT10BO00744 389 aa16.79■□□□□ 0.28
ZNF548-212ENST00000602086 CPLX1O14810 134 aa16.79■□□□□ 0.28
ZNF548-212ENST00000602086 SHMT1P34896 483 aa16.79■□□□□ 0.28
ZNF548-212ENST00000602086 TROAPQ12815 778 aa16.79■□□□□ 0.28
ZNF548-212ENST00000602086 LARP1BQ659C4 914 aaKnown RBP16.79■□□□□ 0.28
ZNF548-212ENST00000602086 TATDN1Q6P1N9 297 aa16.79■□□□□ 0.28
ZNF548-212ENST00000602086 SH3BP5LQ7L8J4 393 aa16.79■□□□□ 0.28
ZNF548-212ENST00000602086 ZFPM1Q8IX07 1006 aa16.79■□□□□ 0.28
ZNF548-212ENST00000602086 FANCBQ8NB91 859 aa16.79■□□□□ 0.28
ZNF548-212ENST00000602086 SLC44A5Q8NCS7 719 aa16.79■□□□□ 0.28
ZNF548-212ENST00000602086 GBP4Q96PP9 640 aa16.79■□□□□ 0.28
ZNF548-212ENST00000602086 NCOA5Q9HCD5 579 aaKnown RBP16.79■□□□□ 0.28
ZNF548-212ENST00000602086 IL17RBQ9NRM6 502 aa16.79■□□□□ 0.28
ZNF548-212ENST00000602086 FAM217BQ9NTX9 383 aaPredicted RBP16.79■□□□□ 0.28
ZNF548-212ENST00000602086 RBM28Q9NW13 759 aaKnown RBP16.79■□□□□ 0.28
ZNF548-212ENST00000602086 HERC5Q9UII4 1024 aaKnown RBP16.79■□□□□ 0.28
ZNF548-212ENST00000602086 ZNF541Q9H0D2 1346 aa16.78■□□□□ 0.28
ZNF548-212ENST00000602086 IGKV6D-41A0A0C4DH26 115 aa16.78■□□□□ 0.28
ZNF548-212ENST00000602086 TBC1D12O60347 775 aa16.78■□□□□ 0.28
ZNF548-212ENST00000602086 ZSCAN22P10073 491 aaPredicted RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms