RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 SLKQ9H2G2 1235 aaPredicted RBP26.52■■□□□ 1.84
IRF3-228ENST00000601291 CNTNAP1P78357 1384 aa26.51■■□□□ 1.83
IRF3-228ENST00000601291 KLF18A0A0U1RQI7 1052 aa26.51■■□□□ 1.83
IRF3-228ENST00000601291 CCDC69A6NI79 296 aa26.51■■□□□ 1.83
IRF3-228ENST00000601291 TFAP4Q01664 338 aa26.51■■□□□ 1.83
IRF3-228ENST00000601291 CCDC178Q5BJE1 867 aa26.51■■□□□ 1.83
IRF3-228ENST00000601291 SGMS1Q86VZ5 419 aa26.51■■□□□ 1.83
IRF3-228ENST00000601291 FOXP4Q8IVH2 680 aaPredicted RBP26.51■■□□□ 1.83
IRF3-228ENST00000601291 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.51■■□□□ 1.83
IRF3-228ENST00000601291 STK3Q13188 491 aa26.5■■□□□ 1.83
IRF3-228ENST00000601291 CCDC83Q8IWF9 413 aa26.5■■□□□ 1.83
IRF3-228ENST00000601291 CHMP4CQ96CF2 233 aa26.5■■□□□ 1.83
IRF3-228ENST00000601291 CSRNP1Q96S65 589 aa26.5■■□□□ 1.83
IRF3-228ENST00000601291 GOLGA8BA8MQT2 603 aa26.49■■□□□ 1.83
IRF3-228ENST00000601291 PFKFB2O60825 505 aa26.49■■□□□ 1.83
IRF3-228ENST00000601291 PDIA3P30101 505 aaKnown RBP26.49■■□□□ 1.83
IRF3-228ENST00000601291 EPS15P42566 896 aa26.49■■□□□ 1.83
IRF3-228ENST00000601291 SYNE3Q6ZMZ3 975 aa26.49■■□□□ 1.83
IRF3-228ENST00000601291 NECAB1Q8N987 351 aa26.49■■□□□ 1.83
IRF3-228ENST00000601291 GTF3C6Q969F1 213 aa26.49■■□□□ 1.83
IRF3-228ENST00000601291 BRPF3Q9ULD4 1205 aa26.49■■□□□ 1.83
IRF3-228ENST00000601291 SEC23AQ15436 765 aa26.48■■□□□ 1.83
IRF3-228ENST00000601291 IFIT1BQ5T764 474 aaKnown RBP26.48■■□□□ 1.83
IRF3-228ENST00000601291 ENAHQ8N8S7 591 aaPredicted RBP26.48■■□□□ 1.83
IRF3-228ENST00000601291 CWC22Q9HCG8 908 aaKnown RBP26.48■■□□□ 1.83
IRF3-228ENST00000601291 TCP11L1Q9NUJ3 509 aa26.48■■□□□ 1.83
IRF3-228ENST00000601291 HACL1Q9UJ83 578 aa26.48■■□□□ 1.83
IRF3-228ENST00000601291 SLC12A7Q9Y666 1083 aa26.48■■□□□ 1.83
IRF3-228ENST00000601291 TRPM4Q8TD43 1214 aa26.47■■□□□ 1.83
IRF3-228ENST00000601291 ADARB2Q9NS39 739 aaKnown RBP26.47■■□□□ 1.83
IRF3-228ENST00000601291 HERC5Q9UII4 1024 aaKnown RBP26.47■■□□□ 1.83
IRF3-228ENST00000601291 SIPA1L1O43166 1804 aa26.47■■□□□ 1.83
IRF3-228ENST00000601291 SHMT1P34896 483 aa26.46■■□□□ 1.83
IRF3-228ENST00000601291 APOA5Q6Q788 366 aa26.46■■□□□ 1.83
IRF3-228ENST00000601291 METTL16Q86W50 562 aaKnown RBP26.46■■□□□ 1.83
IRF3-228ENST00000601291 NEDD1Q8NHV4 660 aa26.46■■□□□ 1.83
IRF3-228ENST00000601291 L3MBTL3Q96JM7 780 aaPredicted RBP26.46■■□□□ 1.83
IRF3-228ENST00000601291 TMEM39BQ9GZU3 492 aa26.46■■□□□ 1.83
IRF3-228ENST00000601291 PLIN4Q96Q06 1357 aa26.46■■□□□ 1.83
IRF3-228ENST00000601291 APOBEC3FQ8IUX4 373 aaKnown RBP26.46■■□□□ 1.83
IRF3-228ENST00000601291 CCDC17Q96LX7 622 aa26.46■■□□□ 1.83
IRF3-228ENST00000601291 SENP2Q9HC62 589 aa26.46■■□□□ 1.83
IRF3-228ENST00000601291 ZBTB43O43298 467 aa26.45■■□□□ 1.82
IRF3-228ENST00000601291 ST3GAL1Q11201 340 aa26.45■■□□□ 1.82
IRF3-228ENST00000601291 SCRN1Q12765 414 aa26.45■■□□□ 1.82
IRF3-228ENST00000601291 RASA3Q14644 834 aa26.45■■□□□ 1.82
IRF3-228ENST00000601291 DGKHQ86XP1 1220 aa26.45■■□□□ 1.82
IRF3-228ENST00000601291 DNAJC18Q9H819 358 aa26.45■■□□□ 1.82
IRF3-228ENST00000601291 GLTPD2A6NH11 291 aa26.44■■□□□ 1.82
IRF3-228ENST00000601291 DHX16O60231 1041 aaKnown RBP26.44■■□□□ 1.82
IRF3-228ENST00000601291 NMT2O60551 498 aa26.44■■□□□ 1.82
IRF3-228ENST00000601291 RCAN1P53805 252 aa26.44■■□□□ 1.82
IRF3-228ENST00000601291 SMC3Q9UQE7 1217 aa26.44■■□□□ 1.82
IRF3-228ENST00000601291 MYH8P13535 1937 aa26.44■■□□□ 1.82
IRF3-228ENST00000601291 SRCAPQ6ZRS2 3230 aa26.43■■□□□ 1.82
IRF3-228ENST00000601291 METAP2P50579 478 aaKnown RBP eCLIP26.43■■□□□ 1.82
IRF3-228ENST00000601291 CCT2P78371 535 aaKnown RBP26.43■■□□□ 1.82
IRF3-228ENST00000601291 ANGEL2Q5VTE6 544 aaKnown RBP26.43■■□□□ 1.82
IRF3-228ENST00000601291 MICU3Q86XE3 530 aa26.43■■□□□ 1.82
IRF3-228ENST00000601291 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.43■■□□□ 1.82
IRF3-228ENST00000601291 IL17RBQ9NRM6 502 aa26.43■■□□□ 1.82
IRF3-228ENST00000601291 ASTN2O75129 1339 aaPredicted RBP26.43■■□□□ 1.82
IRF3-228ENST00000601291 DCAF8L1A6NGE4 600 aa26.42■■□□□ 1.82
IRF3-228ENST00000601291 CERKLQ49MI3 558 aaPredicted RBP26.42■■□□□ 1.82
IRF3-228ENST00000601291 TATDN1Q6P1N9 297 aa26.42■■□□□ 1.82
IRF3-228ENST00000601291 CATIPQ7Z7H3 387 aa26.42■■□□□ 1.82
IRF3-228ENST00000601291 ZNF654Q8IZM8 581 aa26.42■■□□□ 1.82
IRF3-228ENST00000601291 LLPHQ9BRT6 129 aaKnown RBP26.42■■□□□ 1.82
IRF3-228ENST00000601291 HPS5Q9UPZ3 1129 aa26.42■■□□□ 1.82
IRF3-228ENST00000601291 FAM196BA6NMK8 535 aa26.41■■□□□ 1.82
IRF3-228ENST00000601291 GOLGA8AA7E2F4 631 aa26.41■■□□□ 1.82
IRF3-228ENST00000601291 AKR1B1P15121 316 aa26.41■■□□□ 1.82
IRF3-228ENST00000601291 PPP4R3BQ5MIZ7 849 aa26.41■■□□□ 1.82
IRF3-228ENST00000601291 ANKS1AQ92625 1134 aa26.41■■□□□ 1.82
IRF3-228ENST00000601291 KAT14Q9H8E8 782 aa26.41■■□□□ 1.82
IRF3-228ENST00000601291 GGA3Q9NZ52 723 aa26.41■■□□□ 1.82
IRF3-228ENST00000601291 CIZ1Q9ULV3 898 aaPredicted RBP26.41■■□□□ 1.82
IRF3-228ENST00000601291 MPHOSPH10O00566 681 aaKnown RBP26.41■■□□□ 1.82
IRF3-228ENST00000601291 TBC1D12O60347 775 aa26.41■■□□□ 1.82
IRF3-228ENST00000601291 CALM1P0DP23 149 aa26.41■■□□□ 1.82
IRF3-228ENST00000601291 CALM2P0DP24 149 aa26.41■■□□□ 1.82
IRF3-228ENST00000601291 CALM3P0DP25 149 aa26.41■■□□□ 1.82
IRF3-228ENST00000601291 DDIT3P35638 169 aa26.41■■□□□ 1.82
IRF3-228ENST00000601291 DEFB129Q9H1M3 183 aa26.41■■□□□ 1.82
IRF3-228ENST00000601291 CHMP5Q9NZZ3 219 aa26.41■■□□□ 1.82
IRF3-228ENST00000601291 STX8Q9UNK0 236 aa26.41■■□□□ 1.82
IRF3-228ENST00000601291 NID2Q14112 1375 aa26.4■■□□□ 1.82
IRF3-228ENST00000601291 PITPNM2Q9BZ72 1349 aa26.4■■□□□ 1.82
IRF3-228ENST00000601291 DDAH1O94760 285 aa26.4■■□□□ 1.82
IRF3-228ENST00000601291 HIRAP54198 1017 aaPredicted RBP26.4■■□□□ 1.82
IRF3-228ENST00000601291 RCSD1Q6JBY9 416 aa26.4■■□□□ 1.82
IRF3-228ENST00000601291 RAB11FIP4Q86YS3 637 aa26.4■■□□□ 1.82
IRF3-228ENST00000601291 NCOA5Q9HCD5 579 aaKnown RBP26.4■■□□□ 1.82
IRF3-228ENST00000601291 PGAP2Q9UHJ9 254 aa26.4■■□□□ 1.82
IRF3-228ENST00000601291 CPLX1O14810 134 aa26.39■■□□□ 1.82
IRF3-228ENST00000601291 MYL10Q9BUA6 226 aa26.39■■□□□ 1.82
IRF3-228ENST00000601291 PPP2R3BQ9Y5P8 575 aa26.39■■□□□ 1.82
IRF3-228ENST00000601291 IQCA1LA6NCM1 817 aa26.38■■□□□ 1.81
IRF3-228ENST00000601291 SLURP2P0DP57 97 aa26.38■■□□□ 1.81
IRF3-228ENST00000601291 CPLX2Q6PUV4 134 aaKnown RBP26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms