RNA–Protein interactions for RNA: ENST00000600190.1

FARP1-229, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-229ENST00000600190 PDE3AQ14432 1141 aa23.02■■□□□ 1.28
FARP1-229ENST00000600190 ZNF512BQ96KM6 892 aaPredicted RBP23.02■■□□□ 1.28
FARP1-229ENST00000600190 CCDC8Q9H0W5 538 aaPredicted RBP23.02■■□□□ 1.28
FARP1-229ENST00000600190 DNAJC18Q9H819 358 aa23.02■■□□□ 1.28
FARP1-229ENST00000600190 PIH1D3Q9NQM4 214 aaKnown RBP23.02■■□□□ 1.28
FARP1-229ENST00000600190 SIPA1L1O43166 1804 aa23.02■■□□□ 1.28
FARP1-229ENST00000600190 MYO5AQ9Y4I1 1855 aaKnown RBP23.01■■□□□ 1.27
FARP1-229ENST00000600190 CAPN2P17655 700 aa23.01■■□□□ 1.27
FARP1-229ENST00000600190 DYNLL1P63167 89 aaKnown RBP23.01■■□□□ 1.27
FARP1-229ENST00000600190 SHROOM1Q2M3G4 852 aaPredicted RBP23.01■■□□□ 1.27
FARP1-229ENST00000600190 PAWRQ96IZ0 340 aaKnown RBP23.01■■□□□ 1.27
FARP1-229ENST00000600190 P2RX7Q99572 595 aaKnown RBP23.01■■□□□ 1.27
FARP1-229ENST00000600190 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.01■■□□□ 1.27
FARP1-229ENST00000600190 TLR7Q9NYK1 1049 aaKnown RBP23.01■■□□□ 1.27
FARP1-229ENST00000600190 DBNLQ9UJU6 430 aaKnown RBP23.01■■□□□ 1.27
FARP1-229ENST00000600190 GJD2Q9UKL4 321 aa23.01■■□□□ 1.27
FARP1-229ENST00000600190 DDX19BQ9UMR2 479 aa23.01■■□□□ 1.27
FARP1-229ENST00000600190 CDK5RAP2Q96SN8 1893 aa23■■□□□ 1.27
FARP1-229ENST00000600190 ZBTB7BO15156 539 aaPredicted RBP23■■□□□ 1.27
FARP1-229ENST00000600190 HMGCRP04035 888 aa23■■□□□ 1.27
FARP1-229ENST00000600190 HLA-DOAP06340 250 aa23■■□□□ 1.27
FARP1-229ENST00000600190 CYP7A1P22680 504 aa23■■□□□ 1.27
FARP1-229ENST00000600190 METTL16Q86W50 562 aaKnown RBP23■■□□□ 1.27
FARP1-229ENST00000600190 PANK1Q8TE04 598 aa23■■□□□ 1.27
FARP1-229ENST00000600190 CRISPLD2Q9H0B8 497 aa23■■□□□ 1.27
FARP1-229ENST00000600190 NOP58Q9Y2X3 529 aaKnown RBP23■■□□□ 1.27
FARP1-229ENST00000600190 C19orf81C9J6K1 198 aa22.99■■□□□ 1.27
FARP1-229ENST00000600190 USP17L10C9JJH3 530 aa22.99■■□□□ 1.27
FARP1-229ENST00000600190 PEX10O60683 326 aa22.99■■□□□ 1.27
FARP1-229ENST00000600190 IDH1O75874 414 aaKnown RBP22.99■■□□□ 1.27
FARP1-229ENST00000600190 HOXA7P31268 230 aaPredicted RBP22.99■■□□□ 1.27
FARP1-229ENST00000600190 EAF2Q96CJ1 260 aaPredicted RBP22.99■■□□□ 1.27
FARP1-229ENST00000600190 MORF4L1Q9UBU8 362 aa22.99■■□□□ 1.27
FARP1-229ENST00000600190 FOCADQ5VW36 1801 aa22.98■■□□□ 1.27
FARP1-229ENST00000600190 IGSF3O75054 1194 aa22.98■■□□□ 1.27
FARP1-229ENST00000600190 HERVK_113P62684 666 aa22.98■■□□□ 1.27
FARP1-229ENST00000600190 TRIM32Q13049 653 aa22.98■■□□□ 1.27
FARP1-229ENST00000600190 NECAB2Q7Z6G3 386 aa22.98■■□□□ 1.27
FARP1-229ENST00000600190 MIGA1Q8NAN2 632 aa22.98■■□□□ 1.27
FARP1-229ENST00000600190 GPRC5AQ8NFJ5 357 aa22.98■■□□□ 1.27
FARP1-229ENST00000600190 HMX1Q9NP08 348 aaPredicted RBP22.98■■□□□ 1.27
FARP1-229ENST00000600190 ZBTB21Q9ULJ3 1066 aa22.98■■□□□ 1.27
FARP1-229ENST00000600190 RLBP1P12271 317 aa22.97■■□□□ 1.27
FARP1-229ENST00000600190 CYP2B6P20813 491 aa22.97■■□□□ 1.27
FARP1-229ENST00000600190 DIS3LQ8TF46 1054 aaKnown RBP22.97■■□□□ 1.27
FARP1-229ENST00000600190 TXNRD2Q9NNW7 524 aa22.97■■□□□ 1.27
FARP1-229ENST00000600190 GINM1Q9NU53 330 aa22.97■■□□□ 1.27
FARP1-229ENST00000600190 NDUFB9Q9Y6M9 179 aa22.97■■□□□ 1.27
FARP1-229ENST00000600190 RPTORQ8N122 1335 aa22.97■■□□□ 1.27
FARP1-229ENST00000600190 USP5P45974 858 aa22.96■■□□□ 1.27
FARP1-229ENST00000600190 MAGEB6Q8N7X4 407 aa22.96■■□□□ 1.27
FARP1-229ENST00000600190 PRO3102Q9H379 93 aa22.96■■□□□ 1.27
FARP1-229ENST00000600190 COG6Q9Y2V7 657 aa22.96■■□□□ 1.27
FARP1-229ENST00000600190 CCAR1Q8IX12 1150 aaKnown RBP22.95■■□□□ 1.26
FARP1-229ENST00000600190 TRIB2Q92519 343 aa22.95■■□□□ 1.26
FARP1-229ENST00000600190 NUDT12Q9BQG2 462 aa22.95■■□□□ 1.26
FARP1-229ENST00000600190 RBPJLQ9UBG7 517 aa22.95■■□□□ 1.26
FARP1-229ENST00000600190 GH2P01242 217 aa22.94■■□□□ 1.26
FARP1-229ENST00000600190 USP17L2Q6R6M4 530 aa22.94■■□□□ 1.26
FARP1-229ENST00000600190 ANKLE1Q8NAG6 615 aa22.94■■□□□ 1.26
FARP1-229ENST00000600190 PAGR1Q9BTK6 254 aa22.94■■□□□ 1.26
FARP1-229ENST00000600190 EMILIN3Q9NT22 766 aa22.94■■□□□ 1.26
FARP1-229ENST00000600190 PLXNB2O15031 1838 aa22.94■■□□□ 1.26
FARP1-229ENST00000600190 RRP1P56182 461 aaKnown RBP22.93■■□□□ 1.26
FARP1-229ENST00000600190 Q3C1V9 767 aa22.93■■□□□ 1.26
FARP1-229ENST00000600190 CERS3Q8IU89 383 aa22.93■■□□□ 1.26
FARP1-229ENST00000600190 ANTXR1Q9H6X2 564 aa22.93■■□□□ 1.26
FARP1-229ENST00000600190 MYH1P12882 1939 aa22.92■■□□□ 1.26
FARP1-229ENST00000600190 MAPK4P31152 587 aa22.92■■□□□ 1.26
FARP1-229ENST00000600190 ERVK-9P63128 1117 aa22.92■■□□□ 1.26
FARP1-229ENST00000600190 ERVK-24P63145 666 aa22.92■■□□□ 1.26
FARP1-229ENST00000600190 MAP3K12Q12852 859 aa22.92■■□□□ 1.26
FARP1-229ENST00000600190 ZYXQ15942 572 aaKnown RBP22.92■■□□□ 1.26
FARP1-229ENST00000600190 CEP85Q6P2H3 762 aa22.92■■□□□ 1.26
FARP1-229ENST00000600190 SOCS4Q8WXH5 440 aa22.92■■□□□ 1.26
FARP1-229ENST00000600190 STAP2Q9UGK3 403 aa22.92■■□□□ 1.26
FARP1-229ENST00000600190 SERPINB13Q9UIV8 391 aa22.92■■□□□ 1.26
FARP1-229ENST00000600190 EXOC6BQ9Y2D4 811 aa22.92■■□□□ 1.26
FARP1-229ENST00000600190 PRKAR2AP13861 404 aaKnown RBP22.91■■□□□ 1.26
FARP1-229ENST00000600190 RAB3GAP1Q15042 981 aa22.91■■□□□ 1.26
FARP1-229ENST00000600190 TATDN1Q6P1N9 297 aa22.91■■□□□ 1.26
FARP1-229ENST00000600190 AACSQ86V21 672 aa22.91■■□□□ 1.26
FARP1-229ENST00000600190 C7orf61Q8IZ16 206 aa22.91■■□□□ 1.26
FARP1-229ENST00000600190 FEZ1Q99689 392 aa22.91■■□□□ 1.26
FARP1-229ENST00000600190 NBPF3Q9H094 633 aa22.91■■□□□ 1.26
FARP1-229ENST00000600190 PORCNQ9H237 461 aa22.91■■□□□ 1.26
FARP1-229ENST00000600190 XRCC5P13010 732 aaKnown RBP22.9■■□□□ 1.26
FARP1-229ENST00000600190 ERC1Q8IUD2 1116 aa22.9■■□□□ 1.26
FARP1-229ENST00000600190 GTF3C2Q8WUA4 911 aaPredicted RBP22.9■■□□□ 1.26
FARP1-229ENST00000600190 CWC22Q9HCG8 908 aaKnown RBP22.9■■□□□ 1.26
FARP1-229ENST00000600190 LAMA3Q16787 3333 aa22.89■■□□□ 1.26
FARP1-229ENST00000600190 ALPK3Q96L96 1907 aa22.89■■□□□ 1.25
FARP1-229ENST00000600190 ZKSCAN1P17029 563 aaPredicted RBP22.89■■□□□ 1.25
FARP1-229ENST00000600190 CERKLQ49MI3 558 aaPredicted RBP22.89■■□□□ 1.25
FARP1-229ENST00000600190 MAP3K21Q5TCX8 1036 aa22.89■■□□□ 1.25
FARP1-229ENST00000600190 POTEEQ6S8J3 1075 aa22.89■■□□□ 1.25
FARP1-229ENST00000600190 GPR142Q7Z601 462 aa22.89■■□□□ 1.25
FARP1-229ENST00000600190 TTC6Q86TZ1 520 aa22.89■■□□□ 1.25
FARP1-229ENST00000600190 EHD4Q9H223 541 aa22.89■■□□□ 1.25
FARP1-229ENST00000600190 C11orf49Q9H6J7 331 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms