RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 CEP85Q6P2H3 762 aa17.97■□□□□ 0.47
IRF3-223ENST00000599223 DPF3Q92784 378 aa17.97■□□□□ 0.47
IRF3-223ENST00000599223 DEFB118Q96PH6 123 aa17.97■□□□□ 0.47
IRF3-223ENST00000599223 WDR18Q9BV38 432 aa17.97■□□□□ 0.47
IRF3-223ENST00000599223 DHX36Q9H2U1 1008 aaKnown RBP17.97■□□□□ 0.47
IRF3-223ENST00000599223 ZBTB21Q9ULJ3 1066 aa17.97■□□□□ 0.47
IRF3-223ENST00000599223 ASNSP08243 561 aa17.96■□□□□ 0.47
IRF3-223ENST00000599223 GCLCP48506 637 aaPredicted RBP17.96■□□□□ 0.47
IRF3-223ENST00000599223 TRIM32Q13049 653 aa17.96■□□□□ 0.47
IRF3-223ENST00000599223 MIGA1Q8NAN2 632 aa17.96■□□□□ 0.47
IRF3-223ENST00000599223 COA7Q96BR5 231 aa17.96■□□□□ 0.47
IRF3-223ENST00000599223 ANTXR1Q9H6X2 564 aa17.96■□□□□ 0.47
IRF3-223ENST00000599223 TXNRD2Q9NNW7 524 aa17.96■□□□□ 0.47
IRF3-223ENST00000599223 IDH1O75874 414 aaKnown RBP17.95■□□□□ 0.46
IRF3-223ENST00000599223 CYP7A1P22680 504 aa17.95■□□□□ 0.46
IRF3-223ENST00000599223 BACE1P56817 501 aa17.95■□□□□ 0.46
IRF3-223ENST00000599223 POTEEQ6S8J3 1075 aa17.95■□□□□ 0.46
IRF3-223ENST00000599223 CRACR2BQ8N4Y2 399 aaPredicted RBP17.95■□□□□ 0.46
IRF3-223ENST00000599223 PANK1Q8TE04 598 aa17.95■□□□□ 0.46
IRF3-223ENST00000599223 AS3MTQ9HBK9 375 aa17.95■□□□□ 0.46
IRF3-223ENST00000599223 RBM27Q9P2N5 1060 aaKnown RBP17.95■□□□□ 0.46
IRF3-223ENST00000599223 MORF4L1Q9UBU8 362 aa17.95■□□□□ 0.46
IRF3-223ENST00000599223 GJD2Q9UKL4 321 aa17.95■□□□□ 0.46
IRF3-223ENST00000599223 EXOC6BQ9Y2D4 811 aa17.95■□□□□ 0.46
IRF3-223ENST00000599223 FRMPD3Q5JV73 1810 aa17.94■□□□□ 0.46
IRF3-223ENST00000599223 PABPC4Q13310 644 aaKnown RBP eCLIP17.94■□□□□ 0.466e-8■■■■□ 22.6
IRF3-223ENST00000599223 DIS3LQ8TF46 1054 aaKnown RBP17.94■□□□□ 0.46
IRF3-223ENST00000599223 CRISPLD2Q9H0B8 497 aa17.94■□□□□ 0.46
IRF3-223ENST00000599223 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.94■□□□□ 0.462e-7■■■□□ 14.6
IRF3-223ENST00000599223 PRO3102Q9H379 93 aa17.94■□□□□ 0.46
IRF3-223ENST00000599223 IRX3P78415 501 aaPredicted RBP17.93■□□□□ 0.46
IRF3-223ENST00000599223 MAGEB6Q8N7X4 407 aa17.93■□□□□ 0.46
IRF3-223ENST00000599223 TRIB2Q92519 343 aa17.93■□□□□ 0.46
IRF3-223ENST00000599223 HTATIP2Q9BUP3 242 aa17.93■□□□□ 0.46
IRF3-223ENST00000599223 HMGCRP04035 888 aa17.92■□□□□ 0.46
IRF3-223ENST00000599223 HOXA7P31268 230 aaPredicted RBP17.92■□□□□ 0.46
IRF3-223ENST00000599223 HERVK_113P62684 666 aa17.92■□□□□ 0.46
IRF3-223ENST00000599223 AACSQ86V21 672 aa17.92■□□□□ 0.46
IRF3-223ENST00000599223 FOXP4Q8IVH2 680 aaPredicted RBP17.92■□□□□ 0.46
IRF3-223ENST00000599223 P2RX7Q99572 595 aaKnown RBP17.92■□□□□ 0.46
IRF3-223ENST00000599223 TMOD4Q9NZQ9 345 aa17.92■□□□□ 0.46
IRF3-223ENST00000599223 GH2P01242 217 aa17.91■□□□□ 0.46
IRF3-223ENST00000599223 EVX2Q03828 476 aa17.91■□□□□ 0.46
IRF3-223ENST00000599223 TRIM34Q9BYJ4 488 aa17.91■□□□□ 0.46
IRF3-223ENST00000599223 EMILIN3Q9NT22 766 aa17.91■□□□□ 0.46
IRF3-223ENST00000599223 USP17L10C9JJH3 530 aa17.9■□□□□ 0.46
IRF3-223ENST00000599223 TFRCP02786 760 aaKnown RBP17.9■□□□□ 0.46
IRF3-223ENST00000599223 HLA-DOAP06340 250 aa17.9■□□□□ 0.46
IRF3-223ENST00000599223 MNX1P50219 401 aaPredicted RBP17.9■□□□□ 0.46
IRF3-223ENST00000599223 PAWRQ96IZ0 340 aaKnown RBP17.9■□□□□ 0.46
IRF3-223ENST00000599223 PORCNQ9H237 461 aa17.9■□□□□ 0.46
IRF3-223ENST00000599223 IL1RAPL2Q9NP60 686 aa17.9■□□□□ 0.46
IRF3-223ENST00000599223 RBPJLQ9UBG7 517 aa17.9■□□□□ 0.46
IRF3-223ENST00000599223 ZBED9Q6R2W3 1325 aa17.9■□□□□ 0.46
IRF3-223ENST00000599223 MYH8P13535 1937 aa17.9■□□□□ 0.46
IRF3-223ENST00000599223 C19orf81C9J6K1 198 aa17.89■□□□□ 0.45
IRF3-223ENST00000599223 IGSF3O75054 1194 aa17.89■□□□□ 0.45
IRF3-223ENST00000599223 CENPBP07199 599 aaPredicted RBP17.89■□□□□ 0.45
IRF3-223ENST00000599223 USP5P45974 858 aa17.89■□□□□ 0.45
IRF3-223ENST00000599223 ZYXQ15942 572 aaKnown RBP17.89■□□□□ 0.45
IRF3-223ENST00000599223 TATDN1Q6P1N9 297 aa17.89■□□□□ 0.45
IRF3-223ENST00000599223 RIOK1Q9BRS2 568 aaKnown RBP17.89■□□□□ 0.45
IRF3-223ENST00000599223 GINM1Q9NU53 330 aa17.89■□□□□ 0.45
IRF3-223ENST00000599223 A0A0G2JMZ2 1700 aa17.89■□□□□ 0.45
IRF3-223ENST00000599223 MYH7P12883 1935 aa17.88■□□□□ 0.45
IRF3-223ENST00000599223 BAZ2AQ9UIF9 1905 aaKnown RBP17.88■□□□□ 0.45
IRF3-223ENST00000599223 CYP2B6P20813 491 aa17.88■□□□□ 0.45
IRF3-223ENST00000599223 Q3C1V9 767 aa17.88■□□□□ 0.45
IRF3-223ENST00000599223 MAP3K21Q5TCX8 1036 aa17.88■□□□□ 0.45
IRF3-223ENST00000599223 EHD4Q9H223 541 aa17.88■□□□□ 0.45
IRF3-223ENST00000599223 SERPINB13Q9UIV8 391 aa17.88■□□□□ 0.45
IRF3-223ENST00000599223 RLFQ13129 1914 aa17.88■□□□□ 0.45
IRF3-223ENST00000599223 CNMDO75829 334 aa17.87■□□□□ 0.45
IRF3-223ENST00000599223 SHMT1P34896 483 aa17.87■□□□□ 0.45
IRF3-223ENST00000599223 PLCD1P51178 756 aa17.87■□□□□ 0.45
IRF3-223ENST00000599223 ERVK-9P63128 1117 aa17.87■□□□□ 0.45
IRF3-223ENST00000599223 ERVK-24P63145 666 aa17.87■□□□□ 0.45
IRF3-223ENST00000599223 ERC1Q8IUD2 1116 aa17.87■□□□□ 0.45
IRF3-223ENST00000599223 GPRC5AQ8NFJ5 357 aa17.87■□□□□ 0.45
IRF3-223ENST00000599223 ACER1Q8TDN7 264 aa17.87■□□□□ 0.45
IRF3-223ENST00000599223 C12orf42Q96LP6 360 aa17.87■□□□□ 0.45
IRF3-223ENST00000599223 PAGR1Q9BTK6 254 aa17.87■□□□□ 0.45
IRF3-223ENST00000599223 NR2E3Q9Y5X4 410 aa17.87■□□□□ 0.45
IRF3-223ENST00000599223 RPTORQ8N122 1335 aa17.87■□□□□ 0.45
IRF3-223ENST00000599223 PARP14Q460N5 1801 aa17.86■□□□□ 0.45
IRF3-223ENST00000599223 EVI5O60447 810 aa17.86■□□□□ 0.45
IRF3-223ENST00000599223 PRKAR2AP13861 404 aaKnown RBP17.86■□□□□ 0.45
IRF3-223ENST00000599223 PDE6AP16499 860 aa17.86■□□□□ 0.45
IRF3-223ENST00000599223 GUCY1A2P33402 732 aa17.86■□□□□ 0.45
IRF3-223ENST00000599223 MAP3K12Q12852 859 aa17.86■□□□□ 0.45
IRF3-223ENST00000599223 CCL14Q16627 93 aa17.86■□□□□ 0.45
IRF3-223ENST00000599223 USP17L2Q6R6M4 530 aa17.86■□□□□ 0.45
IRF3-223ENST00000599223 SIRT2Q8IXJ6 389 aa17.86■□□□□ 0.45
IRF3-223ENST00000599223 RHPN1Q8TCX5 695 aa17.86■□□□□ 0.45
IRF3-223ENST00000599223 SOCS4Q8WXH5 440 aa17.86■□□□□ 0.45
IRF3-223ENST00000599223 USP6NLQ92738 828 aa17.86■□□□□ 0.45
IRF3-223ENST00000599223 YTHDC1Q96MU7 727 aaKnown RBP17.86■□□□□ 0.45
IRF3-223ENST00000599223 FEZ1Q99689 392 aa17.86■□□□□ 0.45
IRF3-223ENST00000599223 DNAH12Q6ZR08 3092 aa17.86■□□□□ 0.45
IRF3-223ENST00000599223 APBB1O00213 710 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms