RNA–Protein interactions for RNA: ENST00000599097.1

HOMER3-210, Transcript of homer scaffold protein 3, humanhuman

TSL 3

Gene HOMER3, Length 770 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-210ENST00000599097 TTF1Q15361 905 aaPredicted RBP21.26■□□□□ 0.99
HOMER3-210ENST00000599097 CCAR1Q8IX12 1150 aaKnown RBP21.26■□□□□ 0.99
HOMER3-210ENST00000599097 TRMT44Q8IYL2 757 aaKnown RBP21.26■□□□□ 0.99
HOMER3-210ENST00000599097 SOCS4Q8WXH5 440 aa21.26■□□□□ 0.99
HOMER3-210ENST00000599097 MORF4L1Q9UBU8 362 aa21.26■□□□□ 0.99
HOMER3-210ENST00000599097 ZBED9Q6R2W3 1325 aa21.26■□□□□ 0.99
HOMER3-210ENST00000599097 PDE3AQ14432 1141 aa21.25■□□□□ 0.99
HOMER3-210ENST00000599097 UBE2Q1Q7Z7E8 422 aa21.25■□□□□ 0.99
HOMER3-210ENST00000599097 TTC6Q86TZ1 520 aa21.25■□□□□ 0.99
HOMER3-210ENST00000599097 PAK6Q9NQU5 681 aaPredicted RBP21.25■□□□□ 0.99
HOMER3-210ENST00000599097 PALD1Q9ULE6 856 aa21.25■□□□□ 0.99
HOMER3-210ENST00000599097 ZBTB21Q9ULJ3 1066 aa21.25■□□□□ 0.99
HOMER3-210ENST00000599097 COLQQ9Y215 455 aaPredicted RBP21.25■□□□□ 0.99
HOMER3-210ENST00000599097 HMMRO75330 724 aa21.24■□□□□ 0.99
HOMER3-210ENST00000599097 CEP85Q6P2H3 762 aa21.24■□□□□ 0.99
HOMER3-210ENST00000599097 ANKLE1Q8NAG6 615 aa21.24■□□□□ 0.99
HOMER3-210ENST00000599097 CCDC8Q9H0W5 538 aaPredicted RBP21.24■□□□□ 0.99
HOMER3-210ENST00000599097 EHD4Q9H223 541 aa21.24■□□□□ 0.99
HOMER3-210ENST00000599097 PIH1D3Q9NQM4 214 aaKnown RBP21.24■□□□□ 0.99
HOMER3-210ENST00000599097 MAPK4P31152 587 aa21.23■□□□□ 0.99
HOMER3-210ENST00000599097 USP14P54578 494 aa21.23■□□□□ 0.99
HOMER3-210ENST00000599097 USP17L2Q6R6M4 530 aa21.23■□□□□ 0.99
HOMER3-210ENST00000599097 ADGRA1Q86SQ6 560 aa21.23■□□□□ 0.99
HOMER3-210ENST00000599097 AACSQ86V21 672 aa21.23■□□□□ 0.99
HOMER3-210ENST00000599097 GPRC5AQ8NFJ5 357 aa21.23■□□□□ 0.99
HOMER3-210ENST00000599097 EAF2Q96CJ1 260 aaPredicted RBP21.23■□□□□ 0.99
HOMER3-210ENST00000599097 DEFB118Q96PH6 123 aa21.23■□□□□ 0.99
HOMER3-210ENST00000599097 FEZ1Q99689 392 aa21.23■□□□□ 0.99
HOMER3-210ENST00000599097 SERPINB13Q9UIV8 391 aa21.23■□□□□ 0.99
HOMER3-210ENST00000599097 HERVK_113P62684 666 aa21.22■□□□□ 0.99
HOMER3-210ENST00000599097 MAGEB6Q8N7X4 407 aa21.22■□□□□ 0.99
HOMER3-210ENST00000599097 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.22■□□□□ 0.99
HOMER3-210ENST00000599097 CWC22Q9HCG8 908 aaKnown RBP21.22■□□□□ 0.99
HOMER3-210ENST00000599097 HMX1Q9NP08 348 aaPredicted RBP21.22■□□□□ 0.99
HOMER3-210ENST00000599097 SAP30BPQ9UHR5 308 aaKnown RBP21.22■□□□□ 0.99
HOMER3-210ENST00000599097 CDK5RAP2Q96SN8 1893 aa21.22■□□□□ 0.99
HOMER3-210ENST00000599097 SIPA1L1O43166 1804 aa21.21■□□□□ 0.99
HOMER3-210ENST00000599097 EVI5O60447 810 aa21.21■□□□□ 0.99
HOMER3-210ENST00000599097 GDF11O95390 407 aa21.21■□□□□ 0.99
HOMER3-210ENST00000599097 RLBP1P12271 317 aa21.21■□□□□ 0.99
HOMER3-210ENST00000599097 FXR1P51114 621 aaKnown RBP eCLIP21.21■□□□□ 0.99
HOMER3-210ENST00000599097 RRP1BQ14684 758 aaKnown RBP21.21■□□□□ 0.99
HOMER3-210ENST00000599097 CLASRPQ8N2M8 674 aaKnown RBP21.21■□□□□ 0.99
HOMER3-210ENST00000599097 NUDT12Q9BQG2 462 aa21.21■□□□□ 0.99
HOMER3-210ENST00000599097 DNAJC18Q9H819 358 aa21.21■□□□□ 0.99
HOMER3-210ENST00000599097 CABP5Q9NP86 173 aa21.21■□□□□ 0.99
HOMER3-210ENST00000599097 TLR7Q9NYK1 1049 aaKnown RBP21.21■□□□□ 0.99
HOMER3-210ENST00000599097 RPTORQ8N122 1335 aa21.21■□□□□ 0.99
HOMER3-210ENST00000599097 GLRX3O76003 335 aaKnown RBP21.2■□□□□ 0.98
HOMER3-210ENST00000599097 XRCC5P13010 732 aaKnown RBP21.2■□□□□ 0.98
HOMER3-210ENST00000599097 CCNA1P78396 465 aa21.2■□□□□ 0.98
HOMER3-210ENST00000599097 DIEXFQ68CQ4 756 aaKnown RBP21.2■□□□□ 0.98
HOMER3-210ENST00000599097 CHRDL2Q6WN34 429 aa21.2■□□□□ 0.98
HOMER3-210ENST00000599097 NECAB2Q7Z6G3 386 aa21.2■□□□□ 0.98
HOMER3-210ENST00000599097 MIGA1Q8NAN2 632 aa21.2■□□□□ 0.98
HOMER3-210ENST00000599097 CRISPLD2Q9H0B8 497 aa21.2■□□□□ 0.98
HOMER3-210ENST00000599097 EXOC6BQ9Y2D4 811 aa21.2■□□□□ 0.98
HOMER3-210ENST00000599097 DYNLL1P63167 89 aaKnown RBP21.19■□□□□ 0.98
HOMER3-210ENST00000599097 RPAP2Q8IXW5 612 aaPredicted RBP21.19■□□□□ 0.98
HOMER3-210ENST00000599097 KIF1BPQ96EK5 621 aa21.19■□□□□ 0.98
HOMER3-210ENST00000599097 CRNKL1Q9BZJ0 848 aaKnown RBP21.19■□□□□ 0.98
HOMER3-210ENST00000599097 DDX19BQ9UMR2 479 aa21.19■□□□□ 0.98
HOMER3-210ENST00000599097 MYH1P12882 1939 aa21.18■□□□□ 0.98
HOMER3-210ENST00000599097 A0A1W2PPC1 479 aa21.18■□□□□ 0.98
HOMER3-210ENST00000599097 GH2P01242 217 aa21.18■□□□□ 0.98
HOMER3-210ENST00000599097 CERKLQ49MI3 558 aaPredicted RBP21.18■□□□□ 0.98
HOMER3-210ENST00000599097 TATDN1Q6P1N9 297 aa21.18■□□□□ 0.98
HOMER3-210ENST00000599097 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.18■□□□□ 0.98
HOMER3-210ENST00000599097 C12orf42Q96LP6 360 aa21.18■□□□□ 0.98
HOMER3-210ENST00000599097 P2RX7Q99572 595 aaKnown RBP21.18■□□□□ 0.98
HOMER3-210ENST00000599097 TRIOBPQ9H2D6 2365 aa21.17■□□□□ 0.98
HOMER3-210ENST00000599097 MAGEB6P1A0A0J9YX57 407 aa21.17■□□□□ 0.98
HOMER3-210ENST00000599097 USP17L15C9J2P7 530 aa21.17■□□□□ 0.98
HOMER3-210ENST00000599097 USP17L13C9JLJ4 530 aa21.17■□□□□ 0.98
HOMER3-210ENST00000599097 USP17L11C9JVI0 530 aa21.17■□□□□ 0.98
HOMER3-210ENST00000599097 USP17L18D6R9N7 530 aa21.17■□□□□ 0.98
HOMER3-210ENST00000599097 USP17L22D6RA61 530 aa21.17■□□□□ 0.98
HOMER3-210ENST00000599097 USP17L17D6RBQ6 530 aa21.17■□□□□ 0.98
HOMER3-210ENST00000599097 USP17L19D6RCP7 530 aa21.17■□□□□ 0.98
HOMER3-210ENST00000599097 USP17L20D6RJB6 530 aa21.17■□□□□ 0.98
HOMER3-210ENST00000599097 IFIT2P09913 472 aaKnown RBP21.17■□□□□ 0.98
HOMER3-210ENST00000599097 RGS2P41220 211 aa21.17■□□□□ 0.98
HOMER3-210ENST00000599097 ERVK-9P63128 1117 aa21.17■□□□□ 0.98
HOMER3-210ENST00000599097 ERVK-24P63145 666 aa21.17■□□□□ 0.98
HOMER3-210ENST00000599097 USP17L24Q0WX57 530 aa21.17■□□□□ 0.98
HOMER3-210ENST00000599097 ABCB5Q2M3G0 1257 aa21.17■□□□□ 0.98
HOMER3-210ENST00000599097 RHPN1Q8TCX5 695 aa21.17■□□□□ 0.98
HOMER3-210ENST00000599097 GJD2Q9UKL4 321 aa21.17■□□□□ 0.98
HOMER3-210ENST00000599097 POLR3DP05423 398 aaPredicted RBP21.16■□□□□ 0.98
HOMER3-210ENST00000599097 ZKSCAN1P17029 563 aaPredicted RBP21.16■□□□□ 0.98
HOMER3-210ENST00000599097 RAB3GAP1Q15042 981 aa21.16■□□□□ 0.98
HOMER3-210ENST00000599097 MIER1Q8N108 512 aa21.16■□□□□ 0.98
HOMER3-210ENST00000599097 KIAA1683Q9H0B3 1180 aa21.16■□□□□ 0.98
HOMER3-210ENST00000599097 RABGAP1Q9Y3P9 1069 aa21.16■□□□□ 0.98
HOMER3-210ENST00000599097 MYO5AQ9Y4I1 1855 aaKnown RBP21.15■□□□□ 0.98
HOMER3-210ENST00000599097 RAB11FIP3O75154 756 aa21.15■□□□□ 0.98
HOMER3-210ENST00000599097 APBA2Q99767 749 aa21.15■□□□□ 0.98
HOMER3-210ENST00000599097 PAGR1Q9BTK6 254 aa21.15■□□□□ 0.98
HOMER3-210ENST00000599097 NBPF3Q9H094 633 aa21.15■□□□□ 0.98
HOMER3-210ENST00000599097 DOCK3Q8IZD9 2030 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms