RNA–Protein interactions for RNA: ENST00000598594.1

PAF1-208, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, human

TSL 2

Gene PAF1, Length 280 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAF1-208	ENST00000598594	TRIM14	Q14142	442 aa		6.26	□□□□□ -1.41
PAF1-208	ENST00000598594	PTPN21	Q16825	1174 aa		6.26	□□□□□ -1.41
PAF1-208	ENST00000598594	ATP13A4	Q4VNC1	1196 aa		6.26	□□□□□ -1.41
PAF1-208	ENST00000598594	SEZ6	Q53EL9	994 aa		6.26	□□□□□ -1.41
PAF1-208	ENST00000598594	SNAP47	Q5SQN1	464 aa		6.26	□□□□□ -1.41
PAF1-208	ENST00000598594	SYDE2	Q5VT97	1194 aa		6.26	□□□□□ -1.41
PAF1-208	ENST00000598594	KIAA0319	Q5VV43	1072 aa		6.26	□□□□□ -1.41
PAF1-208	ENST00000598594	FAM180B	Q6P0A1	224 aa		6.26	□□□□□ -1.41
PAF1-208	ENST00000598594	IGF2-AS	Q6U949	168 aa		6.26	□□□□□ -1.41
PAF1-208	ENST00000598594	RNF19B	Q6ZMZ0	732 aa		6.26	□□□□□ -1.41
PAF1-208	ENST00000598594	LCA5	Q86VQ0	697 aa		6.26	□□□□□ -1.41
PAF1-208	ENST00000598594	SPATS2	Q86XZ4	545 aa	Known RBP	6.26	□□□□□ -1.41
PAF1-208	ENST00000598594	STAG2	Q8N3U4	1231 aa		6.26	□□□□□ -1.41
PAF1-208	ENST00000598594	GOLM1	Q8NBJ4	401 aa		6.26	□□□□□ -1.41
PAF1-208	ENST00000598594	OR6P1	Q8NGX9	317 aa		6.26	□□□□□ -1.41
PAF1-208	ENST00000598594	GPR152	Q8TDT2	470 aa		6.26	□□□□□ -1.41
PAF1-208	ENST00000598594	CLUHP3	Q96NS8	147 aa		6.26	□□□□□ -1.41
PAF1-208	ENST00000598594	MYD88	Q99836	296 aa		6.26	□□□□□ -1.41
PAF1-208	ENST00000598594	SPATA9	Q9BWV2	254 aa		6.26	□□□□□ -1.41
PAF1-208	ENST00000598594	CARD14	Q9BXL6	1004 aa		6.26	□□□□□ -1.41
PAF1-208	ENST00000598594	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	6.26	□□□□□ -1.41
PAF1-208	ENST00000598594	NCOA5	Q9HCD5	579 aa	Known RBP	6.26	□□□□□ -1.41
PAF1-208	ENST00000598594	ANKIB1	Q9P2G1	1089 aa		6.26	□□□□□ -1.41
PAF1-208	ENST00000598594	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	6.26	□□□□□ -1.41
PAF1-208	ENST00000598594	DDX20	Q9UHI6	824 aa	Known RBP	6.26	□□□□□ -1.41
PAF1-208	ENST00000598594	SERTAD1	Q9UHV2	236 aa		6.26	□□□□□ -1.41
PAF1-208	ENST00000598594	FBXO10	Q9UK96	956 aa		6.26	□□□□□ -1.41
PAF1-208	ENST00000598594	ZBTB21	Q9ULJ3	1066 aa		6.26	□□□□□ -1.41
PAF1-208	ENST00000598594	GTPBP10	A4D1E9	387 aa	Known RBP	6.25	□□□□□ -1.41
PAF1-208	ENST00000598594	TMCC2	O75069	709 aa		6.25	□□□□□ -1.41
PAF1-208	ENST00000598594	RNF40	O75150	1001 aa		6.25	□□□□□ -1.41
PAF1-208	ENST00000598594	BAIAP3	O94812	1187 aa		6.25	□□□□□ -1.41
PAF1-208	ENST00000598594	FBXO21	O94952	628 aa		6.25	□□□□□ -1.41
PAF1-208	ENST00000598594	STAU1	O95793	577 aa	Known RBP	6.25	□□□□□ -1.41
PAF1-208	ENST00000598594	GSTT1	P30711	240 aa		6.25	□□□□□ -1.41
PAF1-208	ENST00000598594	PEX19	P40855	299 aa		6.25	□□□□□ -1.41
PAF1-208	ENST00000598594	STT3A	P46977	705 aa		6.25	□□□□□ -1.41
PAF1-208	ENST00000598594	AK2	P54819	239 aa		6.25	□□□□□ -1.41
PAF1-208	ENST00000598594	GALE	Q14376	348 aa		6.25	□□□□□ -1.41
PAF1-208	ENST00000598594	KIF22	Q14807	665 aa		6.25	□□□□□ -1.41
PAF1-208	ENST00000598594	LONRF2	Q1L5Z9	754 aa		6.25	□□□□□ -1.41
PAF1-208	ENST00000598594	DNAJC21	Q5F1R6	531 aa	Known RBP	6.25	□□□□□ -1.41
PAF1-208	ENST00000598594	GPR158	Q5T848	1215 aa		6.25	□□□□□ -1.41
PAF1-208	ENST00000598594	C6orf15	Q6UXA7	325 aa	Predicted RBP	6.25	□□□□□ -1.41
PAF1-208	ENST00000598594	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	6.25	□□□□□ -1.41
PAF1-208	ENST00000598594	NAXE	Q8NCW5	288 aa		6.25	□□□□□ -1.41
PAF1-208	ENST00000598594	LSM14A	Q8ND56	463 aa	Known RBP	6.25	□□□□□ -1.41
PAF1-208	ENST00000598594	PHC3	Q8NDX5	983 aa		6.25	□□□□□ -1.41
PAF1-208	ENST00000598594	ACRBP	Q8NEB7	543 aa		6.25	□□□□□ -1.41
PAF1-208	ENST00000598594	COG1	Q8WTW3	980 aa		6.25	□□□□□ -1.41
PAF1-208	ENST00000598594	NUP133	Q8WUM0	1156 aa		6.25	□□□□□ -1.41
PAF1-208	ENST00000598594	CCT6B	Q92526	530 aa		6.25	□□□□□ -1.41
PAF1-208	ENST00000598594	NGLY1	Q96IV0	654 aa		6.25	□□□□□ -1.41
PAF1-208	ENST00000598594	PPM1M	Q96MI6	270 aa		6.25	□□□□□ -1.41
PAF1-208	ENST00000598594	ESYT1	Q9BSJ8	1104 aa		6.25	□□□□□ -1.41
PAF1-208	ENST00000598594	ESF1	Q9H501	851 aa	Known RBP	6.25	□□□□□ -1.41
PAF1-208	ENST00000598594	NPHS2	Q9NP85	383 aa		6.25	□□□□□ -1.41
PAF1-208	ENST00000598594	RASSF1	Q9NS23	344 aa		6.25	□□□□□ -1.41
PAF1-208	ENST00000598594	SMC4	Q9NTJ3	1288 aa		6.25	□□□□□ -1.41
PAF1-208	ENST00000598594	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	6.25	□□□□□ -1.41
PAF1-208	ENST00000598594	FOXD3	Q9UJU5	478 aa	Predicted RBP	6.25	□□□□□ -1.41
PAF1-208	ENST00000598594	CEP131	Q9UPN4	1083 aa		6.25	□□□□□ -1.41
PAF1-208	ENST00000598594	TLR6	Q9Y2C9	796 aa		6.25	□□□□□ -1.41
PAF1-208	ENST00000598594	SLC4A7	Q9Y6M7	1214 aa		6.25	□□□□□ -1.41
PAF1-208	ENST00000598594	TRIM64C	A6NLI5	447 aa		6.24	□□□□□ -1.41
PAF1-208	ENST00000598594	PLD2	O14939	933 aa		6.24	□□□□□ -1.41
PAF1-208	ENST00000598594	ADCY3	O60266	1144 aa		6.24	□□□□□ -1.41
PAF1-208	ENST00000598594	BRINP1	O60477	761 aa		6.24	□□□□□ -1.41
PAF1-208	ENST00000598594	GADD45B	O75293	160 aa	Predicted RBP	6.24	□□□□□ -1.41
PAF1-208	ENST00000598594	IFIT1	P09914	478 aa	Known RBP	6.24	□□□□□ -1.41
PAF1-208	ENST00000598594	ARAF	P10398	606 aa		6.24	□□□□□ -1.41
PAF1-208	ENST00000598594	PF4V1	P10720	104 aa		6.24	□□□□□ -1.41
PAF1-208	ENST00000598594	RLBP1	P12271	317 aa		6.24	□□□□□ -1.41
PAF1-208	ENST00000598594	GLUL	P15104	373 aa		6.24	□□□□□ -1.41
PAF1-208	ENST00000598594	JUND	P17535	347 aa		6.24	□□□□□ -1.41
PAF1-208	ENST00000598594	SDS	P20132	328 aa		6.24	□□□□□ -1.41
PAF1-208	ENST00000598594	L1CAM	P32004	1257 aa		6.24	□□□□□ -1.41
PAF1-208	ENST00000598594	MCM4	P33991	863 aa		6.24	□□□□□ -1.41
PAF1-208	ENST00000598594	GDF10	P55107	478 aa		6.24	□□□□□ -1.41
PAF1-208	ENST00000598594	TMPRSS15	P98073	1019 aa		6.24	□□□□□ -1.41
PAF1-208	ENST00000598594	MTA1	Q13330	715 aa		6.24	□□□□□ -1.41
PAF1-208	ENST00000598594	TUBB8	Q3ZCM7	444 aa		6.24	□□□□□ -1.41
PAF1-208	ENST00000598594	FNDC3B	Q53EP0	1204 aa	Known RBP	6.24	□□□□□ -1.41
PAF1-208	ENST00000598594	AGAP9	Q5VTM2	703 aa		6.24	□□□□□ -1.41
PAF1-208	ENST00000598594	BLOC1S3	Q6QNY0	202 aa		6.24	□□□□□ -1.41
PAF1-208	ENST00000598594	SH3BP5L	Q7L8J4	393 aa		6.24	□□□□□ -1.41
PAF1-208	ENST00000598594	MYLK4	Q86YV6	388 aa	Predicted RBP	6.24	□□□□□ -1.41
PAF1-208	ENST00000598594	FAM178B	Q8IXR5	827 aa		6.24	□□□□□ -1.41
PAF1-208	ENST00000598594	DDX1	Q92499	740 aa	Known RBP	6.24	□□□□□ -1.41
PAF1-208	ENST00000598594	ZNF516	Q92618	1163 aa		6.24	□□□□□ -1.41
PAF1-208	ENST00000598594	PRR14	Q9BWN1	585 aa		6.24	□□□□□ -1.41
PAF1-208	ENST00000598594	NAA15	Q9BXJ9	866 aa	Known RBP	6.24	□□□□□ -1.41
PAF1-208	ENST00000598594	DDX21	Q9NR30	783 aa	Known RBP eCLIP	6.24	□□□□□ -1.41
PAF1-208	ENST00000598594	SMYD2	Q9NRG4	433 aa		6.24	□□□□□ -1.41
PAF1-208	ENST00000598594	BLOC1S4	Q9NUP1	217 aa		6.24	□□□□□ -1.41
PAF1-208	ENST00000598594	SAP30BP	Q9UHR5	308 aa	Known RBP	6.24	□□□□□ -1.41
PAF1-208	ENST00000598594	PNMA8B	Q9ULN7	279 aa	Predicted RBP	6.24	□□□□□ -1.41
PAF1-208	ENST00000598594	HDAC5	Q9UQL6	1122 aa		6.24	□□□□□ -1.41
PAF1-208	ENST00000598594	TTLL3	Q9Y4R7	772 aa		6.24	□□□□□ -1.41
PAF1-208	ENST00000598594	MAGED1	Q9Y5V3	778 aa	Predicted RBP	6.24	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms