RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 PLCD1P51178 756 aa16.67■□□□□ 0.26
SCAF1-203ENST00000598359 RRP1P56182 461 aaKnown RBP16.67■□□□□ 0.26
SCAF1-203ENST00000598359 MTMR2Q13614 643 aa16.67■□□□□ 0.26
SCAF1-203ENST00000598359 TSHZ3Q63HK5 1081 aa16.67■□□□□ 0.26
SCAF1-203ENST00000598359 SMCR8Q8TEV9 937 aaPredicted RBP16.67■□□□□ 0.26
SCAF1-203ENST00000598359 HAUS7Q99871 368 aa16.67■□□□□ 0.26
SCAF1-203ENST00000598359 ARMT1Q9H993 441 aa16.67■□□□□ 0.26
SCAF1-203ENST00000598359 ZBTB21Q9ULJ3 1066 aa16.67■□□□□ 0.26
SCAF1-203ENST00000598359 PCDHB15Q9Y5E8 787 aa16.67■□□□□ 0.26
SCAF1-203ENST00000598359 TRIOBPQ9H2D6 2365 aa16.67■□□□□ 0.26
SCAF1-203ENST00000598359 GH2P01242 217 aa16.66■□□□□ 0.26
SCAF1-203ENST00000598359 ASNSP08243 561 aa16.66■□□□□ 0.26
SCAF1-203ENST00000598359 CERS3Q8IU89 383 aa16.66■□□□□ 0.26
SCAF1-203ENST00000598359 PROCA1Q8NCQ7 364 aaPredicted RBP16.66■□□□□ 0.26
SCAF1-203ENST00000598359 SDR42E1Q8WUS8 393 aa16.66■□□□□ 0.26
SCAF1-203ENST00000598359 ZNF333Q96JL9 665 aa16.66■□□□□ 0.26
SCAF1-203ENST00000598359 DCTPP1Q9H773 170 aa16.66■□□□□ 0.26
SCAF1-203ENST00000598359 AS3MTQ9HBK9 375 aa16.66■□□□□ 0.26
SCAF1-203ENST00000598359 SRRDQ9UH36 339 aa16.66■□□□□ 0.26
SCAF1-203ENST00000598359 SLC45A1Q9Y2W3 748 aa16.66■□□□□ 0.26
SCAF1-203ENST00000598359 LOC285556D6RIA3 1793 aa16.66■□□□□ 0.26
SCAF1-203ENST00000598359 PRKAB2O43741 272 aa16.65■□□□□ 0.26
SCAF1-203ENST00000598359 CYP2D6P10635 497 aa16.65■□□□□ 0.26
SCAF1-203ENST00000598359 ADD2P35612 726 aa16.65■□□□□ 0.26
SCAF1-203ENST00000598359 ANKRD13CQ8N6S4 541 aa16.65■□□□□ 0.26
SCAF1-203ENST00000598359 WDR18Q9BV38 432 aa16.65■□□□□ 0.26
SCAF1-203ENST00000598359 CRNKL1Q9BZJ0 848 aaKnown RBP16.65■□□□□ 0.26
SCAF1-203ENST00000598359 SERPINB13Q9UIV8 391 aa16.65■□□□□ 0.26
SCAF1-203ENST00000598359 GABRQQ9UN88 632 aa16.65■□□□□ 0.26
SCAF1-203ENST00000598359 SUPT16HQ9Y5B9 1047 aaKnown RBP16.65■□□□□ 0.26
SCAF1-203ENST00000598359 DDX60LQ5H9U9 1706 aaKnown RBP16.65■□□□□ 0.26
SCAF1-203ENST00000598359 PEX10O60683 326 aa16.64■□□□□ 0.25
SCAF1-203ENST00000598359 MBD4O95243 580 aa16.64■□□□□ 0.25
SCAF1-203ENST00000598359 POLR3DP05423 398 aaPredicted RBP16.64■□□□□ 0.25
SCAF1-203ENST00000598359 EN2P19622 333 aaPredicted RBP16.64■□□□□ 0.25
SCAF1-203ENST00000598359 BACE1P56817 501 aa16.64■□□□□ 0.25
SCAF1-203ENST00000598359 PRKCZQ05513 592 aa16.64■□□□□ 0.25
SCAF1-203ENST00000598359 SH3D19Q5HYK7 790 aa16.64■□□□□ 0.25
SCAF1-203ENST00000598359 TATDN1Q6P1N9 297 aa16.64■□□□□ 0.25
SCAF1-203ENST00000598359 TMED8Q6PL24 325 aaPredicted RBP16.64■□□□□ 0.25
SCAF1-203ENST00000598359 CRBNQ96SW2 442 aa16.64■□□□□ 0.25
SCAF1-203ENST00000598359 TBC1D2Q9BYX2 928 aa16.64■□□□□ 0.25
SCAF1-203ENST00000598359 ASCC2Q9H1I8 757 aaPredicted RBP16.64■□□□□ 0.25
SCAF1-203ENST00000598359 MCM9Q9NXL9 1143 aa16.64■□□□□ 0.25
SCAF1-203ENST00000598359 NAV1Q8NEY1 1877 aa16.64■□□□□ 0.25
SCAF1-203ENST00000598359 MYPNQ86TC9 1320 aa16.64■□□□□ 0.25
SCAF1-203ENST00000598359 GNRH1P01148 92 aa16.63■□□□□ 0.25
SCAF1-203ENST00000598359 SHMT1P34896 483 aa16.63■□□□□ 0.25
SCAF1-203ENST00000598359 FCGRTP55899 365 aa16.63■□□□□ 0.25
SCAF1-203ENST00000598359 ZYXQ15942 572 aaKnown RBP16.63■□□□□ 0.25
SCAF1-203ENST00000598359 NBPF11Q86T75 865 aa16.63■□□□□ 0.25
SCAF1-203ENST00000598359 TTC6Q86TZ1 520 aa16.63■□□□□ 0.25
SCAF1-203ENST00000598359 RAET1EQ8TD07 263 aa16.63■□□□□ 0.25
SCAF1-203ENST00000598359 EHD4Q9H223 541 aa16.63■□□□□ 0.25
SCAF1-203ENST00000598359 ECHDC1Q9NTX5 307 aa16.63■□□□□ 0.25
SCAF1-203ENST00000598359 COLQQ9Y215 455 aaPredicted RBP16.63■□□□□ 0.25
SCAF1-203ENST00000598359 SMIM22K7EJ46 135 aa16.62■□□□□ 0.25
SCAF1-203ENST00000598359 RAB3GAP1Q15042 981 aa16.62■□□□□ 0.25
SCAF1-203ENST00000598359 CERKLQ49MI3 558 aaPredicted RBP16.62■□□□□ 0.25
SCAF1-203ENST00000598359 DCP1AQ9NPI6 582 aaPredicted RBP16.62■□□□□ 0.25
SCAF1-203ENST00000598359 TMOD4Q9NZQ9 345 aa16.62■□□□□ 0.25
SCAF1-203ENST00000598359 PNMA3Q9UL41 463 aa16.62■□□□□ 0.25
SCAF1-203ENST00000598359 CYP2D7A0A087X1C5 515 aa16.61■□□□□ 0.25
SCAF1-203ENST00000598359 USP17L10C9JJH3 530 aa16.61■□□□□ 0.25
SCAF1-203ENST00000598359 HOXD10P28358 340 aa16.61■□□□□ 0.25
SCAF1-203ENST00000598359 PRMT2P55345 433 aa16.61■□□□□ 0.25
SCAF1-203ENST00000598359 MTFR1Q15390 333 aa16.61■□□□□ 0.25
SCAF1-203ENST00000598359 ABCB5Q2M3G0 1257 aa16.61■□□□□ 0.25
SCAF1-203ENST00000598359 SLC44A5Q8NCS7 719 aa16.61■□□□□ 0.25
SCAF1-203ENST00000598359 OTUD7AQ8TE49 926 aaPredicted RBP16.61■□□□□ 0.25
SCAF1-203ENST00000598359 DYNLL2Q96FJ2 89 aa16.61■□□□□ 0.25
SCAF1-203ENST00000598359 P2RX7Q99572 595 aaKnown RBP16.61■□□□□ 0.25
SCAF1-203ENST00000598359 TMEM106CQ9BVX2 250 aa16.61■□□□□ 0.25
SCAF1-203ENST00000598359 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.61■□□□□ 0.254e-7■■■□□ 16.7
SCAF1-203ENST00000598359 EMILIN3Q9NT22 766 aa16.61■□□□□ 0.25
SCAF1-203ENST00000598359 MGAMO43451 1857 aa16.61■□□□□ 0.25
SCAF1-203ENST00000598359 TNPO2O14787 897 aaKnown RBP16.6■□□□□ 0.25
SCAF1-203ENST00000598359 GRK4P32298 578 aa16.6■□□□□ 0.25
SCAF1-203ENST00000598359 IRX3P78415 501 aaPredicted RBP16.6■□□□□ 0.25
SCAF1-203ENST00000598359 GABPAQ06546 454 aa16.6■□□□□ 0.25
SCAF1-203ENST00000598359 PABPC4Q13310 644 aaKnown RBP eCLIP16.6■□□□□ 0.25
SCAF1-203ENST00000598359 ACER1Q8TDN7 264 aa16.6■□□□□ 0.25
SCAF1-203ENST00000598359 PUS7LQ9H0K6 701 aaKnown RBP16.6■□□□□ 0.25
SCAF1-203ENST00000598359 GINM1Q9NU53 330 aa16.6■□□□□ 0.25
SCAF1-203ENST00000598359 C19orf81C9J6K1 198 aa16.59■□□□□ 0.25
SCAF1-203ENST00000598359 ELNP15502 786 aa16.59■□□□□ 0.25
SCAF1-203ENST00000598359 GUCY1A2P33402 732 aa16.59■□□□□ 0.25
SCAF1-203ENST00000598359 FLT3LGP49771 235 aa16.59■□□□□ 0.25
SCAF1-203ENST00000598359 FAM110CQ1W6H9 321 aa16.59■□□□□ 0.25
SCAF1-203ENST00000598359 FEZ1Q99689 392 aa16.59■□□□□ 0.25
SCAF1-203ENST00000598359 BIN2Q9UBW5 565 aaPredicted RBP16.59■□□□□ 0.25
SCAF1-203ENST00000598359 TAOK2Q9UL54 1235 aa16.59■□□□□ 0.25
SCAF1-203ENST00000598359 DLL1O00548 723 aa16.58■□□□□ 0.24
SCAF1-203ENST00000598359 MPHOSPH10O00566 681 aaKnown RBP16.58■□□□□ 0.24
SCAF1-203ENST00000598359 GCLCP48506 637 aaPredicted RBP16.58■□□□□ 0.24
SCAF1-203ENST00000598359 SEPT2Q15019 361 aa16.58■□□□□ 0.24
SCAF1-203ENST00000598359 UBE3CQ15386 1083 aa16.58■□□□□ 0.24
SCAF1-203ENST00000598359 USP17L2Q6R6M4 530 aa16.58■□□□□ 0.24
SCAF1-203ENST00000598359 GPATCH3Q96I76 525 aa16.58■□□□□ 0.24
SCAF1-203ENST00000598359 TXNRD2Q9NNW7 524 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms