RNA–Protein interactions for RNA: ENST00000598309.1

USHBP1-208, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-208ENST00000598309 ZFYP08048 801 aaPredicted RBP20.08■□□□□ 0.81
USHBP1-208ENST00000598309 PLCD1P51178 756 aa20.08■□□□□ 0.81
USHBP1-208ENST00000598309 LACTBP83111 547 aaPredicted RBP20.08■□□□□ 0.81
USHBP1-208ENST00000598309 GABPAQ06546 454 aa20.08■□□□□ 0.81
USHBP1-208ENST00000598309 LRRFIP1Q32MZ4 808 aaKnown RBP20.08■□□□□ 0.81
USHBP1-208ENST00000598309 SH3D19Q5HYK7 790 aa20.08■□□□□ 0.81
USHBP1-208ENST00000598309 ANKRD45Q5TZF3 282 aa20.08■□□□□ 0.81
USHBP1-208ENST00000598309 OTUD7AQ8TE49 926 aaPredicted RBP20.08■□□□□ 0.81
USHBP1-208ENST00000598309 LOC285556D6RIA3 1793 aa20.08■□□□□ 0.8
USHBP1-208ENST00000598309 GDF11O95390 407 aa20.07■□□□□ 0.8
USHBP1-208ENST00000598309 CHGBP05060 677 aa20.07■□□□□ 0.8
USHBP1-208ENST00000598309 JAG1P78504 1218 aa20.07■□□□□ 0.8
USHBP1-208ENST00000598309 KIF22Q14807 665 aa20.07■□□□□ 0.8
USHBP1-208ENST00000598309 EXOC6Q8TAG9 804 aa20.07■□□□□ 0.8
USHBP1-208ENST00000598309 RWDD1Q9H446 243 aaPredicted RBP20.07■□□□□ 0.8
USHBP1-208ENST00000598309 GNRH1P01148 92 aa20.06■□□□□ 0.8
USHBP1-208ENST00000598309 CYP2C8P10632 490 aa20.06■□□□□ 0.8
USHBP1-208ENST00000598309 BCRP11274 1271 aa20.06■□□□□ 0.8
USHBP1-208ENST00000598309 SHMT1P34896 483 aa20.06■□□□□ 0.8
USHBP1-208ENST00000598309 HMGCS2P54868 508 aa20.06■□□□□ 0.8
USHBP1-208ENST00000598309 BACE1P56817 501 aa20.06■□□□□ 0.8
USHBP1-208ENST00000598309 CAP1Q01518 475 aa20.06■□□□□ 0.8
USHBP1-208ENST00000598309 APPBP2Q92624 585 aa20.06■□□□□ 0.8
USHBP1-208ENST00000598309 DDRGK1Q96HY6 314 aa20.06■□□□□ 0.8
USHBP1-208ENST00000598309 PUS7LQ9H0K6 701 aaKnown RBP20.06■□□□□ 0.8
USHBP1-208ENST00000598309 CPA4Q9UI42 421 aa20.06■□□□□ 0.8
USHBP1-208ENST00000598309 PNMA3Q9UL41 463 aa20.06■□□□□ 0.8
USHBP1-208ENST00000598309 PTPN22Q9Y2R2 807 aa20.06■□□□□ 0.8
USHBP1-208ENST00000598309 SUPT16HQ9Y5B9 1047 aaKnown RBP20.06■□□□□ 0.8
USHBP1-208ENST00000598309 C19orf81C9J6K1 198 aa20.05■□□□□ 0.8
USHBP1-208ENST00000598309 RNF113AO15541 343 aaKnown RBP20.05■□□□□ 0.8
USHBP1-208ENST00000598309 PRKAB2O43741 272 aa20.05■□□□□ 0.8
USHBP1-208ENST00000598309 GH2P01242 217 aa20.05■□□□□ 0.8
USHBP1-208ENST00000598309 PABPC4Q13310 644 aaKnown RBP eCLIP20.05■□□□□ 0.8
USHBP1-208ENST00000598309 SHROOM1Q2M3G4 852 aaPredicted RBP20.05■□□□□ 0.8
USHBP1-208ENST00000598309 CERKLQ49MI3 558 aaPredicted RBP20.05■□□□□ 0.8
USHBP1-208ENST00000598309 TREML2Q5T2D2 321 aa20.05■□□□□ 0.8
USHBP1-208ENST00000598309 SMC5Q8IY18 1101 aa20.05■□□□□ 0.8
USHBP1-208ENST00000598309 MTMR2Q13614 643 aa20.04■□□□□ 0.8
USHBP1-208ENST00000598309 ABCB5Q2M3G0 1257 aa20.04■□□□□ 0.8
USHBP1-208ENST00000598309 AMOTL1Q8IY63 956 aa20.04■□□□□ 0.8
USHBP1-208ENST00000598309 STAP2Q9UGK3 403 aa20.04■□□□□ 0.8
USHBP1-208ENST00000598309 SWAP70Q9UH65 585 aa20.04■□□□□ 0.8
USHBP1-208ENST00000598309 SLC4A4Q9Y6R1 1079 aa20.04■□□□□ 0.8
USHBP1-208ENST00000598309 USP17L10C9JJH3 530 aa20.03■□□□□ 0.8
USHBP1-208ENST00000598309 SMCR8Q8TEV9 937 aaPredicted RBP20.03■□□□□ 0.8
USHBP1-208ENST00000598309 STRBPQ96SI9 672 aaKnown RBP20.03■□□□□ 0.8
USHBP1-208ENST00000598309 CABP5Q9NP86 173 aa20.03■□□□□ 0.8
USHBP1-208ENST00000598309 TMOD4Q9NZQ9 345 aa20.03■□□□□ 0.8
USHBP1-208ENST00000598309 CYP2D6P10635 497 aa20.02■□□□□ 0.8
USHBP1-208ENST00000598309 PRMT2P55345 433 aa20.02■□□□□ 0.8
USHBP1-208ENST00000598309 C12orf60Q5U649 245 aa20.02■□□□□ 0.8
USHBP1-208ENST00000598309 GIMAP6Q6P9H5 292 aa20.02■□□□□ 0.8
USHBP1-208ENST00000598309 OSBP2Q969R2 916 aa20.02■□□□□ 0.8
USHBP1-208ENST00000598309 ARHGAP39Q9C0H5 1083 aa20.02■□□□□ 0.8
USHBP1-208ENST00000598309 OSBPP22059 807 aa20.01■□□□□ 0.79
USHBP1-208ENST00000598309 RGS19P49795 217 aa20.01■□□□□ 0.79
USHBP1-208ENST00000598309 PDE1AP54750 535 aa20.01■□□□□ 0.79
USHBP1-208ENST00000598309 FSD1Q9BTV5 496 aa20.01■□□□□ 0.79
USHBP1-208ENST00000598309 ARPP21Q9UBL0 812 aaPredicted RBP20.01■□□□□ 0.79
USHBP1-208ENST00000598309 USP17L12C9JPN9 530 aa20■□□□□ 0.79
USHBP1-208ENST00000598309 USP17L21D6R901 530 aa20■□□□□ 0.79
USHBP1-208ENST00000598309 GPAA1O43292 621 aa20■□□□□ 0.79
USHBP1-208ENST00000598309 GNAT2P19087 354 aa20■□□□□ 0.79
USHBP1-208ENST00000598309 HOXA7P31268 230 aaPredicted RBP20■□□□□ 0.79
USHBP1-208ENST00000598309 PSMC4P43686 418 aa20■□□□□ 0.79
USHBP1-208ENST00000598309 GCLCP48506 637 aaPredicted RBP20■□□□□ 0.79
USHBP1-208ENST00000598309 EVX2Q03828 476 aa20■□□□□ 0.79
USHBP1-208ENST00000598309 RAB3GAP1Q15042 981 aa20■□□□□ 0.79
USHBP1-208ENST00000598309 FAM110CQ1W6H9 321 aa20■□□□□ 0.79
USHBP1-208ENST00000598309 USP17L2Q6R6M4 530 aa20■□□□□ 0.79
USHBP1-208ENST00000598309 ARMC5Q96C12 935 aa20■□□□□ 0.79
USHBP1-208ENST00000598309 C12orf42Q96LP6 360 aa20■□□□□ 0.79
USHBP1-208ENST00000598309 HOXD10P28358 340 aa19.99■□□□□ 0.79
USHBP1-208ENST00000598309 CTGFP29279 349 aa19.99■□□□□ 0.79
USHBP1-208ENST00000598309 GUCY1A2P33402 732 aa19.99■□□□□ 0.79
USHBP1-208ENST00000598309 USP14P54578 494 aa19.99■□□□□ 0.79
USHBP1-208ENST00000598309 FCGRTP55899 365 aa19.99■□□□□ 0.79
USHBP1-208ENST00000598309 CTR9Q6PD62 1173 aa19.99■□□□□ 0.79
USHBP1-208ENST00000598309 SLC44A5Q8NCS7 719 aa19.99■□□□□ 0.79
USHBP1-208ENST00000598309 EVI5LQ96CN4 794 aa19.99■□□□□ 0.79
USHBP1-208ENST00000598309 TRIM47Q96LD4 638 aa19.99■□□□□ 0.79
USHBP1-208ENST00000598309 FEZ1Q99689 392 aa19.99■□□□□ 0.79
USHBP1-208ENST00000598309 LNPKQ9C0E8 428 aa19.99■□□□□ 0.79
USHBP1-208ENST00000598309 KIAA1683Q9H0B3 1180 aa19.99■□□□□ 0.79
USHBP1-208ENST00000598309 ASCC2Q9H1I8 757 aaPredicted RBP19.99■□□□□ 0.79
USHBP1-208ENST00000598309 BAZ2AQ9UIF9 1905 aaKnown RBP19.98■□□□□ 0.79
USHBP1-208ENST00000598309 GSG1L2A8MUP6 293 aa19.98■□□□□ 0.79
USHBP1-208ENST00000598309 M0R2C6 588 aa19.98■□□□□ 0.79
USHBP1-208ENST00000598309 IGHDP01880 384 aa19.98■□□□□ 0.79
USHBP1-208ENST00000598309 IRX3P78415 501 aaPredicted RBP19.98■□□□□ 0.79
USHBP1-208ENST00000598309 SBK1Q52WX2 424 aa19.98■□□□□ 0.79
USHBP1-208ENST00000598309 ZMYM1Q5SVZ6 1142 aa19.98■□□□□ 0.79
USHBP1-208ENST00000598309 TMEM179Q6ZVK1 233 aa19.98■□□□□ 0.79
USHBP1-208ENST00000598309 C16orf86Q6ZW13 317 aa19.98■□□□□ 0.79
USHBP1-208ENST00000598309 CHD1LQ86WJ1 897 aa19.98■□□□□ 0.79
USHBP1-208ENST00000598309 TICAM2Q86XR7 235 aa19.98■□□□□ 0.79
USHBP1-208ENST00000598309 DYNLL2Q96FJ2 89 aa19.98■□□□□ 0.79
USHBP1-208ENST00000598309 CCDC17Q96LX7 622 aa19.98■□□□□ 0.79
USHBP1-208ENST00000598309 PTCH2Q9Y6C5 1203 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms