RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 CERKLQ49MI3 558 aaPredicted RBP24.24■■□□□ 1.47
PNKP-211ENST00000598020 CNKSR2Q8WXI2 1034 aa24.24■■□□□ 1.47
PNKP-211ENST00000598020 ZIC5Q96T25 663 aa24.24■■□□□ 1.47
PNKP-211ENST00000598020 PPARAQ07869 468 aa24.23■■□□□ 1.47
PNKP-211ENST00000598020 OTUD5Q96G74 571 aa24.23■■□□□ 1.47
PNKP-211ENST00000598020 TBC1D2Q9BYX2 928 aa24.23■■□□□ 1.47
PNKP-211ENST00000598020 ANAPC4Q9UJX5 808 aa24.23■■□□□ 1.47
PNKP-211ENST00000598020 KCNH4Q9UQ05 1017 aa24.23■■□□□ 1.47
PNKP-211ENST00000598020 MYH8P13535 1937 aa24.23■■□□□ 1.47
PNKP-211ENST00000598020 PHIPQ8WWQ0 1821 aa24.22■■□□□ 1.47
PNKP-211ENST00000598020 MANSC4A6NHS7 340 aaPredicted RBP24.22■■□□□ 1.47
PNKP-211ENST00000598020 CDC45O75419 566 aa24.22■■□□□ 1.47
PNKP-211ENST00000598020 INHBEP58166 350 aa24.22■■□□□ 1.47
PNKP-211ENST00000598020 JAG1P78504 1218 aa24.22■■□□□ 1.47
PNKP-211ENST00000598020 SLC44A5Q8NCS7 719 aa24.22■■□□□ 1.47
PNKP-211ENST00000598020 CCDC17Q96LX7 622 aa24.22■■□□□ 1.47
PNKP-211ENST00000598020 ZBTB21Q9ULJ3 1066 aa24.22■■□□□ 1.47
PNKP-211ENST00000598020 TESPA1A2RU30 521 aaPredicted RBP24.21■■□□□ 1.47
PNKP-211ENST00000598020 IRF6O14896 467 aa24.21■■□□□ 1.47
PNKP-211ENST00000598020 SLC3A2P08195 630 aaKnown RBP24.21■■□□□ 1.47
PNKP-211ENST00000598020 TM4SF4P48230 202 aa24.21■■□□□ 1.47
PNKP-211ENST00000598020 MS4A4AQ96JQ5 239 aa24.21■■□□□ 1.47
PNKP-211ENST00000598020 ZNF287Q9HBT7 754 aa24.21■■□□□ 1.47
PNKP-211ENST00000598020 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.21■■□□□ 1.47
PNKP-211ENST00000598020 ZHX2Q9Y6X8 837 aa24.21■■□□□ 1.47
PNKP-211ENST00000598020 USP17L5A8MUK1 530 aa24.2■■□□□ 1.46
PNKP-211ENST00000598020 CXCL11O14625 94 aa24.2■■□□□ 1.46
PNKP-211ENST00000598020 GDF11O95390 407 aa24.2■■□□□ 1.46
PNKP-211ENST00000598020 GTF2A2P52657 109 aa24.2■■□□□ 1.46
PNKP-211ENST00000598020 MKRN3Q13064 507 aaKnown RBP24.2■■□□□ 1.46
PNKP-211ENST00000598020 ABCB5Q2M3G0 1257 aa24.2■■□□□ 1.46
PNKP-211ENST00000598020 ESYT1Q9BSJ8 1104 aa24.2■■□□□ 1.46
PNKP-211ENST00000598020 AFG3L2Q9Y4W6 797 aa24.2■■□□□ 1.46
PNKP-211ENST00000598020 GH2P01242 217 aa24.19■■□□□ 1.46
PNKP-211ENST00000598020 MAP2K1Q02750 393 aaPredicted RBP24.19■■□□□ 1.46
PNKP-211ENST00000598020 SREBF2Q12772 1141 aa24.19■■□□□ 1.46
PNKP-211ENST00000598020 CASC1Q6TDU7 716 aa24.19■■□□□ 1.46
PNKP-211ENST00000598020 WDR18Q9BV38 432 aa24.19■■□□□ 1.46
PNKP-211ENST00000598020 CABP5Q9NP86 173 aa24.19■■□□□ 1.46
PNKP-211ENST00000598020 CTNNA3Q9UI47 895 aa24.19■■□□□ 1.46
PNKP-211ENST00000598020 FGRP09769 529 aa24.18■■□□□ 1.46
PNKP-211ENST00000598020 PDE4BQ07343 736 aa24.18■■□□□ 1.46
PNKP-211ENST00000598020 SNAPC2Q13487 334 aa24.18■■□□□ 1.46
PNKP-211ENST00000598020 AS3MTQ9HBK9 375 aa24.18■■□□□ 1.46
PNKP-211ENST00000598020 RASA1P20936 1047 aa24.17■■□□□ 1.46
PNKP-211ENST00000598020 SHROOM1Q2M3G4 852 aaPredicted RBP24.17■■□□□ 1.46
PNKP-211ENST00000598020 TMEM179Q6ZVK1 233 aa24.17■■□□□ 1.46
PNKP-211ENST00000598020 MKNK2Q9HBH9 465 aa24.17■■□□□ 1.46
PNKP-211ENST00000598020 WBP1LQ9NX94 342 aa24.17■■□□□ 1.46
PNKP-211ENST00000598020 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.17■■□□□ 1.46
PNKP-211ENST00000598020 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.17■■□□□ 1.46
PNKP-211ENST00000598020 CETPP11597 493 aa24.16■■□□□ 1.46
PNKP-211ENST00000598020 AKR1B1P15121 316 aa24.16■■□□□ 1.46
PNKP-211ENST00000598020 GUCY1A2P33402 732 aa24.16■■□□□ 1.46
PNKP-211ENST00000598020 ZNF280CQ8ND82 737 aa24.16■■□□□ 1.46
PNKP-211ENST00000598020 PTPRFP10586 1907 aa24.16■■□□□ 1.46
PNKP-211ENST00000598020 LAMA4Q16363 1823 aa24.15■■□□□ 1.46
PNKP-211ENST00000598020 PCP11498 1178 aaKnown RBP24.15■■□□□ 1.46
PNKP-211ENST00000598020 PTH1RQ03431 593 aa24.15■■□□□ 1.46
PNKP-211ENST00000598020 CTDSPL2Q05D32 466 aa24.15■■□□□ 1.46
PNKP-211ENST00000598020 CCDC84Q86UT8 332 aaPredicted RBP24.15■■□□□ 1.46
PNKP-211ENST00000598020 MAP4K1Q92918 833 aa24.15■■□□□ 1.46
PNKP-211ENST00000598020 GREB1LQ9C091 1923 aaPredicted RBP24.14■■□□□ 1.46
PNKP-211ENST00000598020 A0A0G2JLL6 359 aaPredicted RBP24.14■■□□□ 1.45
PNKP-211ENST00000598020 ZNF213O14771 459 aa24.14■■□□□ 1.45
PNKP-211ENST00000598020 ORC4O43929 436 aa24.14■■□□□ 1.45
PNKP-211ENST00000598020 SPP2Q13103 211 aa24.14■■□□□ 1.45
PNKP-211ENST00000598020 KIAA1211Q6ZU35 1233 aa24.14■■□□□ 1.45
PNKP-211ENST00000598020 PRRT2Q7Z6L0 340 aaPredicted RBP24.14■■□□□ 1.45
PNKP-211ENST00000598020 ZNF444Q8N0Y2 327 aaPredicted RBP24.14■■□□□ 1.45
PNKP-211ENST00000598020 BRI3BPQ8WY22 251 aa24.14■■□□□ 1.45
PNKP-211ENST00000598020 U3KPZ7 1027 aaPredicted RBP24.14■■□□□ 1.45
PNKP-211ENST00000598020 CCL15-CCL14A0A0B4J2E2 113 aa24.13■■□□□ 1.45
PNKP-211ENST00000598020 MOGSQ13724 837 aa24.13■■□□□ 1.45
PNKP-211ENST00000598020 SEPT2Q15019 361 aa24.13■■□□□ 1.45
PNKP-211ENST00000598020 RAB3GAP1Q15042 981 aa24.13■■□□□ 1.45
PNKP-211ENST00000598020 CCL15Q16663 113 aa24.13■■□□□ 1.45
PNKP-211ENST00000598020 IMMTQ16891 758 aaKnown RBP24.13■■□□□ 1.45
PNKP-211ENST00000598020 SH3D19Q5HYK7 790 aa24.13■■□□□ 1.45
PNKP-211ENST00000598020 STK11IPQ8N1F8 1099 aa24.13■■□□□ 1.45
PNKP-211ENST00000598020 PTPN18Q99952 460 aa24.13■■□□□ 1.45
PNKP-211ENST00000598020 LSG1Q9H089 658 aaKnown RBP24.13■■□□□ 1.45
PNKP-211ENST00000598020 NBPF3Q9H094 633 aa24.13■■□□□ 1.45
PNKP-211ENST00000598020 TACC3Q9Y6A5 838 aa24.13■■□□□ 1.45
PNKP-211ENST00000598020 TRIM75PA6NK02 468 aa24.12■■□□□ 1.45
PNKP-211ENST00000598020 MPHOSPH10O00566 681 aaKnown RBP24.12■■□□□ 1.45
PNKP-211ENST00000598020 PRDM1O75626 825 aa24.12■■□□□ 1.45
PNKP-211ENST00000598020 NT5C2P49902 561 aa24.12■■□□□ 1.45
PNKP-211ENST00000598020 HAND2P61296 217 aa24.12■■□□□ 1.45
PNKP-211ENST00000598020 AKNAD1Q5T1N1 836 aa24.12■■□□□ 1.45
PNKP-211ENST00000598020 IFNL1Q8IU54 200 aa24.12■■□□□ 1.45
PNKP-211ENST00000598020 STAG1Q8WVM7 1258 aa24.12■■□□□ 1.45
PNKP-211ENST00000598020 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.12■■□□□ 1.45
PNKP-211ENST00000598020 RNF41Q9H4P4 317 aaPredicted RBP24.12■■□□□ 1.45
PNKP-211ENST00000598020 ZCCHC17Q9NP64 241 aaKnown RBP24.12■■□□□ 1.45
PNKP-211ENST00000598020 PLIN4Q96Q06 1357 aa24.12■■□□□ 1.45
PNKP-211ENST00000598020 C19orf81C9J6K1 198 aa24.11■■□□□ 1.45
PNKP-211ENST00000598020 IGF2BP3O00425 579 aaKnown RBP eCLIP24.11■■□□□ 1.45
PNKP-211ENST00000598020 CA12O43570 354 aa24.11■■□□□ 1.45
PNKP-211ENST00000598020 ALDH1A1P00352 501 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms