RNA–Protein interactions for RNA: ENST00000597180.1

IRF3-216, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 301 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-216ENST00000597180 CCL15-CCL14A0A0B4J2E2 113 aa21.68■■□□□ 1.06
IRF3-216ENST00000597180 HIP1O00291 1037 aa21.68■■□□□ 1.06
IRF3-216ENST00000597180 CXCL11O14625 94 aa21.68■■□□□ 1.06
IRF3-216ENST00000597180 ASNSP08243 561 aa21.68■■□□□ 1.06
IRF3-216ENST00000597180 HSPA8P11142 646 aaKnown RBP21.68■■□□□ 1.06
IRF3-216ENST00000597180 JAG1P78504 1218 aa21.68■■□□□ 1.06
IRF3-216ENST00000597180 CCL15Q16663 113 aa21.68■■□□□ 1.06
IRF3-216ENST00000597180 BRI3BPQ8WY22 251 aa21.68■■□□□ 1.06
IRF3-216ENST00000597180 PTPN18Q99952 460 aa21.68■■□□□ 1.06
IRF3-216ENST00000597180 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.68■■□□□ 1.06
IRF3-216ENST00000597180 LOC285556D6RIA3 1793 aa21.68■■□□□ 1.06
IRF3-216ENST00000597180 ROBO3Q96MS0 1386 aa21.67■■□□□ 1.06
IRF3-216ENST00000597180 IGF2BP3O00425 579 aaKnown RBP eCLIP21.67■■□□□ 1.06
IRF3-216ENST00000597180 FOXP2O15409 715 aa21.67■■□□□ 1.06
IRF3-216ENST00000597180 CETPP11597 493 aa21.67■■□□□ 1.06
IRF3-216ENST00000597180 IFNL3Q8IZI9 196 aa21.67■■□□□ 1.06
IRF3-216ENST00000597180 NACAP1Q9BZK3 213 aa21.67■■□□□ 1.06
IRF3-216ENST00000597180 ZBTB21Q9ULJ3 1066 aa21.67■■□□□ 1.06
IRF3-216ENST00000597180 SMIM22K7EJ46 135 aa21.66■■□□□ 1.06
IRF3-216ENST00000597180 TRPA1O75762 1119 aa21.66■■□□□ 1.06
IRF3-216ENST00000597180 GDF11O95390 407 aa21.66■■□□□ 1.06
IRF3-216ENST00000597180 ALDH1A1P00352 501 aa21.66■■□□□ 1.06
IRF3-216ENST00000597180 APPP05067 770 aa21.66■■□□□ 1.06
IRF3-216ENST00000597180 TDO2P48775 406 aa21.66■■□□□ 1.06
IRF3-216ENST00000597180 SHROOM1Q2M3G4 852 aaPredicted RBP21.66■■□□□ 1.06
IRF3-216ENST00000597180 CERKLQ49MI3 558 aaPredicted RBP21.66■■□□□ 1.06
IRF3-216ENST00000597180 C16orf86Q6ZW13 317 aa21.66■■□□□ 1.06
IRF3-216ENST00000597180 DYNLL2Q96FJ2 89 aa21.66■■□□□ 1.06
IRF3-216ENST00000597180 CFHR5Q9BXR6 569 aa21.66■■□□□ 1.06
IRF3-216ENST00000597180 GREB1LQ9C091 1923 aaPredicted RBP21.66■■□□□ 1.06
IRF3-216ENST00000597180 CCDC171Q6TFL3 1326 aa21.65■■□□□ 1.06
IRF3-216ENST00000597180 USP17L5A8MUK1 530 aa21.65■■□□□ 1.06
IRF3-216ENST00000597180 MOGSQ13724 837 aa21.65■■□□□ 1.06
IRF3-216ENST00000597180 OTUD7BQ6GQQ9 843 aa21.65■■□□□ 1.06
IRF3-216ENST00000597180 ZNF589Q86UQ0 364 aaPredicted RBP21.65■■□□□ 1.06
IRF3-216ENST00000597180 CCDC84Q86UT8 332 aaPredicted RBP21.65■■□□□ 1.06
IRF3-216ENST00000597180 SLC44A5Q8NCS7 719 aa21.65■■□□□ 1.06
IRF3-216ENST00000597180 DIAPH3Q9NSV4 1193 aa21.65■■□□□ 1.06
IRF3-216ENST00000597180 PPP4R2Q9NY27 417 aa21.65■■□□□ 1.06
IRF3-216ENST00000597180 CASP8AP2Q9UKL3 1982 aa21.65■■□□□ 1.06
IRF3-216ENST00000597180 A0A0G2JLL6 359 aaPredicted RBP21.64■■□□□ 1.05
IRF3-216ENST00000597180 GH2P01242 217 aa21.64■■□□□ 1.05
IRF3-216ENST00000597180 CDK8P49336 464 aa21.64■■□□□ 1.05
IRF3-216ENST00000597180 ABCB5Q2M3G0 1257 aa21.64■■□□□ 1.05
IRF3-216ENST00000597180 VPS53Q5VIR6 699 aa21.64■■□□□ 1.05
IRF3-216ENST00000597180 PRRT2Q7Z6L0 340 aaPredicted RBP21.64■■□□□ 1.05
IRF3-216ENST00000597180 ZNF280CQ8ND82 737 aa21.64■■□□□ 1.05
IRF3-216ENST00000597180 WDR18Q9BV38 432 aa21.64■■□□□ 1.05
IRF3-216ENST00000597180 AS3MTQ9HBK9 375 aa21.64■■□□□ 1.05
IRF3-216ENST00000597180 ZCCHC17Q9NP64 241 aaKnown RBP21.64■■□□□ 1.05
IRF3-216ENST00000597180 TSKSQ9UJT2 592 aa21.64■■□□□ 1.05
IRF3-216ENST00000597180 LAMA4Q16363 1823 aa21.64■■□□□ 1.05
IRF3-216ENST00000597180 LBX1P52954 281 aa21.63■■□□□ 1.05
IRF3-216ENST00000597180 MFAP1P55081 439 aaKnown RBP21.63■■□□□ 1.05
IRF3-216ENST00000597180 ALX1Q15699 326 aa21.63■■□□□ 1.05
IRF3-216ENST00000597180 CWC27Q6UX04 472 aaKnown RBP21.63■■□□□ 1.05
IRF3-216ENST00000597180 SKAP1Q86WV1 359 aa21.63■■□□□ 1.05
IRF3-216ENST00000597180 NAPBQ9H115 298 aa21.63■■□□□ 1.05
IRF3-216ENST00000597180 ZMYM6O95789 1325 aa21.62■■□□□ 1.05
IRF3-216ENST00000597180 TRIM75PA6NK02 468 aa21.62■■□□□ 1.05
IRF3-216ENST00000597180 MINDY4BA8MYZ0 360 aa21.62■■□□□ 1.05
IRF3-216ENST00000597180 SPP2Q13103 211 aa21.62■■□□□ 1.05
IRF3-216ENST00000597180 FAM43AQ8N2R8 423 aa21.62■■□□□ 1.05
IRF3-216ENST00000597180 PRDM10Q9NQV6 1147 aa21.62■■□□□ 1.05
IRF3-216ENST00000597180 BTBD19C9JJ37 291 aa21.61■■□□□ 1.05
IRF3-216ENST00000597180 HSPD1P10809 573 aaKnown RBP21.61■■□□□ 1.05
IRF3-216ENST00000597180 FASTKD5Q7L8L6 764 aaKnown RBP21.61■■□□□ 1.05
IRF3-216ENST00000597180 ANKRD23Q86SG2 305 aa21.61■■□□□ 1.05
IRF3-216ENST00000597180 CCDC17Q96LX7 622 aa21.61■■□□□ 1.05
IRF3-216ENST00000597180 CABP5Q9NP86 173 aa21.61■■□□□ 1.05
IRF3-216ENST00000597180 TBC1D8O95759 1140 aa21.6■■□□□ 1.05
IRF3-216ENST00000597180 GUCY1A2P33402 732 aa21.6■■□□□ 1.05
IRF3-216ENST00000597180 NOM1Q5C9Z4 860 aaKnown RBP21.6■■□□□ 1.05
IRF3-216ENST00000597180 SH3D19Q5HYK7 790 aa21.6■■□□□ 1.05
IRF3-216ENST00000597180 CHMLP26374 656 aa21.59■■□□□ 1.05
IRF3-216ENST00000597180 PPARAQ07869 468 aa21.59■■□□□ 1.05
IRF3-216ENST00000597180 GPAT2Q6NUI2 795 aa21.59■■□□□ 1.05
IRF3-216ENST00000597180 TMEM179Q6ZVK1 233 aa21.59■■□□□ 1.05
IRF3-216ENST00000597180 R3HDMLQ9H3Y0 253 aa21.59■■□□□ 1.05
IRF3-216ENST00000597180 RAD50Q92878 1312 aa21.58■■□□□ 1.05
IRF3-216ENST00000597180 FGAP02671 866 aa21.58■■□□□ 1.05
IRF3-216ENST00000597180 AKR1B1P15121 316 aa21.58■■□□□ 1.05
IRF3-216ENST00000597180 BACE1P56817 501 aa21.58■■□□□ 1.05
IRF3-216ENST00000597180 CRHR2Q13324 411 aa21.58■■□□□ 1.05
IRF3-216ENST00000597180 RAB3GAP1Q15042 981 aa21.58■■□□□ 1.05
IRF3-216ENST00000597180 BMP2KLQ5H9B9 411 aa21.58■■□□□ 1.05
IRF3-216ENST00000597180 PROCA1Q8NCQ7 364 aaPredicted RBP21.58■■□□□ 1.05
IRF3-216ENST00000597180 ANAPC4Q9UJX5 808 aa21.58■■□□□ 1.05
IRF3-216ENST00000597180 MYH4Q9Y623 1939 aa21.57■■□□□ 1.04
IRF3-216ENST00000597180 C19orf81C9J6K1 198 aa21.57■■□□□ 1.04
IRF3-216ENST00000597180 MPHOSPH10O00566 681 aaKnown RBP21.57■■□□□ 1.04
IRF3-216ENST00000597180 SLC3A2P08195 630 aaKnown RBP21.57■■□□□ 1.04
IRF3-216ENST00000597180 RASA1P20936 1047 aa21.57■■□□□ 1.04
IRF3-216ENST00000597180 MTMR2Q13614 643 aa21.57■■□□□ 1.04
IRF3-216ENST00000597180 SEPT2Q15019 361 aa21.57■■□□□ 1.04
IRF3-216ENST00000597180 TAF1CQ15572 869 aaPredicted RBP21.57■■□□□ 1.04
IRF3-216ENST00000597180 GADL1Q6ZQY3 521 aa21.57■■□□□ 1.04
IRF3-216ENST00000597180 IL25Q9H293 177 aa21.57■■□□□ 1.04
IRF3-216ENST00000597180 ZNF287Q9HBT7 754 aa21.57■■□□□ 1.04
IRF3-216ENST00000597180 SLC45A1Q9Y2W3 748 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms