RNA–Protein interactions for RNA: ENST00000596172.1

ZNF558-204, Transcript of zinc finger protein 558, humanhuman

TSL 4

Gene ZNF558, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-204ENST00000596172 NOM1Q5C9Z4 860 aaKnown RBP21.86■■□□□ 1.09
ZNF558-204ENST00000596172 TTC22Q5TAA0 569 aa21.86■■□□□ 1.09
ZNF558-204ENST00000596172 WDR18Q9BV38 432 aa21.86■■□□□ 1.09
ZNF558-204ENST00000596172 A0A0G2JLL6 359 aaPredicted RBP21.85■■□□□ 1.09
ZNF558-204ENST00000596172 HIP1O00291 1037 aa21.85■■□□□ 1.09
ZNF558-204ENST00000596172 JAG1P78504 1218 aa21.85■■□□□ 1.09
ZNF558-204ENST00000596172 CERKLQ49MI3 558 aaPredicted RBP21.85■■□□□ 1.09
ZNF558-204ENST00000596172 PRRT2Q7Z6L0 340 aaPredicted RBP21.85■■□□□ 1.09
ZNF558-204ENST00000596172 NACAP1Q9BZK3 213 aa21.85■■□□□ 1.09
ZNF558-204ENST00000596172 TSKSQ9UJT2 592 aa21.85■■□□□ 1.09
ZNF558-204ENST00000596172 APPP05067 770 aa21.84■■□□□ 1.09
ZNF558-204ENST00000596172 EVX2Q03828 476 aa21.84■■□□□ 1.09
ZNF558-204ENST00000596172 MOGSQ13724 837 aa21.84■■□□□ 1.09
ZNF558-204ENST00000596172 FASTKD5Q7L8L6 764 aaKnown RBP21.84■■□□□ 1.09
ZNF558-204ENST00000596172 IFNL3Q8IZI9 196 aa21.84■■□□□ 1.09
ZNF558-204ENST00000596172 ZNF280CQ8ND82 737 aa21.84■■□□□ 1.09
ZNF558-204ENST00000596172 CCDC136Q96JN2 1154 aa21.84■■□□□ 1.09
ZNF558-204ENST00000596172 FAM227BQ96M60 508 aa21.84■■□□□ 1.09
ZNF558-204ENST00000596172 AS3MTQ9HBK9 375 aa21.84■■□□□ 1.09
ZNF558-204ENST00000596172 EPB41L4AQ9HCS5 686 aaPredicted RBP21.84■■□□□ 1.09
ZNF558-204ENST00000596172 ZBTB21Q9ULJ3 1066 aa21.84■■□□□ 1.09
ZNF558-204ENST00000596172 A0A0D9SFI3 127 aa21.83■■□□□ 1.09
ZNF558-204ENST00000596172 BTBD19C9JJ37 291 aa21.83■■□□□ 1.09
ZNF558-204ENST00000596172 GDF11O95390 407 aa21.83■■□□□ 1.09
ZNF558-204ENST00000596172 TBC1D8O95759 1140 aa21.83■■□□□ 1.09
ZNF558-204ENST00000596172 GSPT1P15170 499 aaKnown RBP21.83■■□□□ 1.09
ZNF558-204ENST00000596172 NMIQ13287 307 aaPredicted RBP21.83■■□□□ 1.09
ZNF558-204ENST00000596172 C16orf86Q6ZW13 317 aa21.83■■□□□ 1.09
ZNF558-204ENST00000596172 ANKRD23Q86SG2 305 aa21.83■■□□□ 1.09
ZNF558-204ENST00000596172 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.83■■□□□ 1.09
ZNF558-204ENST00000596172 DOCK1Q14185 1865 aa21.83■■□□□ 1.08
ZNF558-204ENST00000596172 NAV1Q8NEY1 1877 aa21.83■■□□□ 1.08
ZNF558-204ENST00000596172 CYP2D7A0A087X1C5 515 aa21.82■■□□□ 1.08
ZNF558-204ENST00000596172 GH2P01242 217 aa21.82■■□□□ 1.08
ZNF558-204ENST00000596172 SPP2Q13103 211 aa21.82■■□□□ 1.08
ZNF558-204ENST00000596172 ABCB5Q2M3G0 1257 aa21.82■■□□□ 1.08
ZNF558-204ENST00000596172 FAM43AQ8N2R8 423 aa21.82■■□□□ 1.08
ZNF558-204ENST00000596172 DYNLL2Q96FJ2 89 aa21.82■■□□□ 1.08
ZNF558-204ENST00000596172 CABP5Q9NP86 173 aa21.82■■□□□ 1.08
ZNF558-204ENST00000596172 TRIM75PA6NK02 468 aa21.81■■□□□ 1.08
ZNF558-204ENST00000596172 FOXP2O15409 715 aa21.81■■□□□ 1.08
ZNF558-204ENST00000596172 TDO2P48775 406 aa21.81■■□□□ 1.08
ZNF558-204ENST00000596172 CDK8P49336 464 aa21.81■■□□□ 1.08
ZNF558-204ENST00000596172 ALX1Q15699 326 aa21.81■■□□□ 1.08
ZNF558-204ENST00000596172 CCDC129Q6ZRS4 1044 aa21.81■■□□□ 1.08
ZNF558-204ENST00000596172 CCDC84Q86UT8 332 aaPredicted RBP21.81■■□□□ 1.08
ZNF558-204ENST00000596172 CCDC17Q96LX7 622 aa21.81■■□□□ 1.08
ZNF558-204ENST00000596172 ROBO3Q96MS0 1386 aa21.8■■□□□ 1.08
ZNF558-204ENST00000596172 MFAP1P55081 439 aaKnown RBP21.8■■□□□ 1.08
ZNF558-204ENST00000596172 SHROOM1Q2M3G4 852 aaPredicted RBP21.8■■□□□ 1.08
ZNF558-204ENST00000596172 SH3D19Q5HYK7 790 aa21.8■■□□□ 1.08
ZNF558-204ENST00000596172 GPAT2Q6NUI2 795 aa21.8■■□□□ 1.08
ZNF558-204ENST00000596172 SLC44A5Q8NCS7 719 aa21.8■■□□□ 1.08
ZNF558-204ENST00000596172 NAPBQ9H115 298 aa21.8■■□□□ 1.08
ZNF558-204ENST00000596172 DIAPH3Q9NSV4 1193 aa21.8■■□□□ 1.08
ZNF558-204ENST00000596172 SLC45A1Q9Y2W3 748 aa21.8■■□□□ 1.08
ZNF558-204ENST00000596172 MINDY4BA8MYZ0 360 aa21.79■■□□□ 1.08
ZNF558-204ENST00000596172 C19orf81C9J6K1 198 aa21.79■■□□□ 1.08
ZNF558-204ENST00000596172 SMIM22K7EJ46 135 aa21.79■■□□□ 1.08
ZNF558-204ENST00000596172 GPR25O00155 361 aa21.79■■□□□ 1.08
ZNF558-204ENST00000596172 BACE1P56817 501 aa21.79■■□□□ 1.08
ZNF558-204ENST00000596172 CRHR2Q13324 411 aa21.79■■□□□ 1.08
ZNF558-204ENST00000596172 PROCA1Q8NCQ7 364 aaPredicted RBP21.79■■□□□ 1.08
ZNF558-204ENST00000596172 R3HDMLQ9H3Y0 253 aa21.79■■□□□ 1.08
ZNF558-204ENST00000596172 ZFYVE28Q9HCC9 887 aa21.79■■□□□ 1.08
ZNF558-204ENST00000596172 CCDC171Q6TFL3 1326 aa21.79■■□□□ 1.08
ZNF558-204ENST00000596172 USP17L10C9JJH3 530 aa21.78■■□□□ 1.08
ZNF558-204ENST00000596172 PDHXO00330 501 aa21.78■■□□□ 1.08
ZNF558-204ENST00000596172 GUCY1A2P33402 732 aa21.78■■□□□ 1.08
ZNF558-204ENST00000596172 TAF1CQ15572 869 aaPredicted RBP21.78■■□□□ 1.08
ZNF558-204ENST00000596172 COL13A1Q5TAT6 717 aaPredicted RBP21.78■■□□□ 1.08
ZNF558-204ENST00000596172 VPS53Q5VIR6 699 aa21.78■■□□□ 1.08
ZNF558-204ENST00000596172 TMEM179Q6ZVK1 233 aa21.78■■□□□ 1.08
ZNF558-204ENST00000596172 ZNF287Q9HBT7 754 aa21.78■■□□□ 1.08
ZNF558-204ENST00000596172 HSPD1P10809 573 aaKnown RBP21.77■■□□□ 1.08
ZNF558-204ENST00000596172 CWC27Q6UX04 472 aaKnown RBP21.77■■□□□ 1.08
ZNF558-204ENST00000596172 ZNF589Q86UQ0 364 aaPredicted RBP21.77■■□□□ 1.08
ZNF558-204ENST00000596172 PHIPQ8WWQ0 1821 aa21.76■■□□□ 1.07
ZNF558-204ENST00000596172 RAB3GAP1Q15042 981 aa21.76■■□□□ 1.07
ZNF558-204ENST00000596172 GADL1Q6ZQY3 521 aa21.76■■□□□ 1.07
ZNF558-204ENST00000596172 PPP4R2Q9NY27 417 aa21.76■■□□□ 1.07
ZNF558-204ENST00000596172 AGTPBP1Q9UPW5 1226 aa21.76■■□□□ 1.07
ZNF558-204ENST00000596172 BAZ2AQ9UIF9 1905 aaKnown RBP21.76■■□□□ 1.07
ZNF558-204ENST00000596172 ZMYM6O95789 1325 aa21.76■■□□□ 1.07
ZNF558-204ENST00000596172 TLR2O60603 784 aa21.75■■□□□ 1.07
ZNF558-204ENST00000596172 SLC3A2P08195 630 aaKnown RBP21.75■■□□□ 1.07
ZNF558-204ENST00000596172 AKR1B1P15121 316 aa21.75■■□□□ 1.07
ZNF558-204ENST00000596172 HMGCS2P54868 508 aa21.75■■□□□ 1.07
ZNF558-204ENST00000596172 PPARAQ07869 468 aa21.75■■□□□ 1.07
ZNF558-204ENST00000596172 MTMR2Q13614 643 aa21.75■■□□□ 1.07
ZNF558-204ENST00000596172 SEPT2Q15019 361 aa21.75■■□□□ 1.07
ZNF558-204ENST00000596172 ZNF296Q8WUU4 475 aaPredicted RBP21.75■■□□□ 1.07
ZNF558-204ENST00000596172 MKNK2Q9HBH9 465 aa21.75■■□□□ 1.07
ZNF558-204ENST00000596172 ANAPC4Q9UJX5 808 aa21.75■■□□□ 1.07
ZNF558-204ENST00000596172 MPHOSPH10O00566 681 aaKnown RBP21.74■■□□□ 1.07
ZNF558-204ENST00000596172 FKTNO75072 461 aa21.74■■□□□ 1.07
ZNF558-204ENST00000596172 FGAP02671 866 aa21.74■■□□□ 1.07
ZNF558-204ENST00000596172 USP17L2Q6R6M4 530 aa21.74■■□□□ 1.07
ZNF558-204ENST00000596172 PARK7Q99497 189 aaKnown RBP21.74■■□□□ 1.07
ZNF558-204ENST00000596172 KIAA1683Q9H0B3 1180 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms