RNA–Protein interactions for RNA: ENST00000595558.1

ZNF541-205, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-205ENST00000595558 DOT1LQ8TEK3 1739 aa17.57■□□□□ 0.4
ZNF541-205ENST00000595558 PHLPP2Q6ZVD8 1323 aa17.56■□□□□ 0.4
ZNF541-205ENST00000595558 IFIT3O14879 490 aaKnown RBP17.56■□□□□ 0.4
ZNF541-205ENST00000595558 CUTAO60888 179 aa17.56■□□□□ 0.4
ZNF541-205ENST00000595558 PNMA6AP0CW24 399 aaPredicted RBP17.56■□□□□ 0.4
ZNF541-205ENST00000595558 PLA2G4AP47712 749 aa17.56■□□□□ 0.4
ZNF541-205ENST00000595558 TDO2P48775 406 aa17.56■□□□□ 0.4
ZNF541-205ENST00000595558 NR5A1Q13285 461 aa17.56■□□□□ 0.4
ZNF541-205ENST00000595558 CCDC152Q4G0S7 254 aa17.56■□□□□ 0.4
ZNF541-205ENST00000595558 TBC1D9BQ66K14 1250 aa17.56■□□□□ 0.4
ZNF541-205ENST00000595558 PPP2R2CQ9Y2T4 447 aa17.56■□□□□ 0.4
ZNF541-205ENST00000595558 POLR2DO15514 142 aaKnown RBP17.56■□□□□ 0.4
ZNF541-205ENST00000595558 CBFA2T2O43439 604 aa17.56■□□□□ 0.4
ZNF541-205ENST00000595558 GTF2E1P29083 439 aaPredicted RBP17.56■□□□□ 0.4
ZNF541-205ENST00000595558 MAP3K12Q12852 859 aa17.56■□□□□ 0.4
ZNF541-205ENST00000595558 TRIM29Q14134 588 aa17.56■□□□□ 0.4
ZNF541-205ENST00000595558 UBXN4Q92575 508 aa17.56■□□□□ 0.4
ZNF541-205ENST00000595558 SERTAD1Q9UHV2 236 aa17.56■□□□□ 0.4
ZNF541-205ENST00000595558 BAZ2BQ9UIF8 2168 aaKnown RBP17.56■□□□□ 0.4
ZNF541-205ENST00000595558 PATL2C9JE40 543 aaKnown RBP17.55■□□□□ 0.4
ZNF541-205ENST00000595558 TADA3O75528 432 aa17.55■□□□□ 0.4
ZNF541-205ENST00000595558 CPLX2Q6PUV4 134 aaKnown RBP17.55■□□□□ 0.4
ZNF541-205ENST00000595558 NOSTRINQ8IVI9 506 aa17.55■□□□□ 0.4
ZNF541-205ENST00000595558 KRI1Q8N9T8 703 aaKnown RBP17.55■□□□□ 0.4
ZNF541-205ENST00000595558 DESI2Q9BSY9 194 aa17.55■□□□□ 0.4
ZNF541-205ENST00000595558 RAI14Q9P0K7 980 aa17.55■□□□□ 0.4
ZNF541-205ENST00000595558 SLC12A7Q9Y666 1083 aa17.55■□□□□ 0.4
ZNF541-205ENST00000595558 ECM29Q5VYK3 1845 aa17.55■□□□□ 0.4
ZNF541-205ENST00000595558 SPATA31A5Q5VU36 1347 aa17.55■□□□□ 0.4
ZNF541-205ENST00000595558 SPATA31A7Q8IWB4 1347 aa17.55■□□□□ 0.4
ZNF541-205ENST00000595558 UQCRFS1P1P0C7P4 283 aa17.55■□□□□ 0.4
ZNF541-205ENST00000595558 CYP7A1P22680 504 aa17.55■□□□□ 0.4
ZNF541-205ENST00000595558 NUP133Q8WUM0 1156 aa17.55■□□□□ 0.4
ZNF541-205ENST00000595558 SAMSN1Q9NSI8 373 aaKnown RBP17.55■□□□□ 0.4
ZNF541-205ENST00000595558 NFE2L3Q9Y4A8 694 aa17.55■□□□□ 0.4
ZNF541-205ENST00000595558 PCDHB6Q9Y5E3 794 aa17.55■□□□□ 0.4
ZNF541-205ENST00000595558 ATRNO75882 1429 aa17.54■□□□□ 0.4
ZNF541-205ENST00000595558 SSRP1Q08945 709 aaKnown RBP17.54■□□□□ 0.4
ZNF541-205ENST00000595558 BMS1Q14692 1282 aaKnown RBP17.54■□□□□ 0.4
ZNF541-205ENST00000595558 DIS3L2Q8IYB7 885 aaKnown RBP17.54■□□□□ 0.4
ZNF541-205ENST00000595558 TC2NQ8N9U0 490 aa17.54■□□□□ 0.4
ZNF541-205ENST00000595558 OXER1Q8TDS5 423 aa17.54■□□□□ 0.4
ZNF541-205ENST00000595558 ZNF384Q8TF68 577 aa17.54■□□□□ 0.4
ZNF541-205ENST00000595558 TBX2Q13207 712 aaPredicted RBP17.54■□□□□ 0.4
ZNF541-205ENST00000595558 MTF1Q14872 753 aa17.54■□□□□ 0.4
ZNF541-205ENST00000595558 SGMS1Q86VZ5 419 aa17.54■□□□□ 0.4
ZNF541-205ENST00000595558 MNS1Q8NEH6 495 aa17.54■□□□□ 0.4
ZNF541-205ENST00000595558 TMEM87BQ96K49 555 aa17.54■□□□□ 0.4
ZNF541-205ENST00000595558 ZNF512BQ96KM6 892 aaPredicted RBP17.54■□□□□ 0.4
ZNF541-205ENST00000595558 BAG1Q99933 345 aaPredicted RBP17.54■□□□□ 0.4
ZNF541-205ENST00000595558 IRX2Q9BZI1 471 aaPredicted RBP17.54■□□□□ 0.4
ZNF541-205ENST00000595558 FBXO2Q9UK22 296 aaPredicted RBP17.54■□□□□ 0.4
ZNF541-205ENST00000595558 A0A0U1RQJ8 604 aa17.53■□□□□ 0.4
ZNF541-205ENST00000595558 ZRANB2O95218 330 aaKnown RBP eCLIP17.53■□□□□ 0.4
ZNF541-205ENST00000595558 POSTNQ15063 836 aa17.53■□□□□ 0.4
ZNF541-205ENST00000595558 ATRIPQ8WXE1 791 aa17.53■□□□□ 0.4
ZNF541-205ENST00000595558 NGLY1Q96IV0 654 aa17.53■□□□□ 0.4
ZNF541-205ENST00000595558 CASP1P29466 404 aa17.53■□□□□ 0.4
ZNF541-205ENST00000595558 GNG11P61952 73 aa17.53■□□□□ 0.4
ZNF541-205ENST00000595558 TXNRD3Q86VQ6 643 aa17.53■□□□□ 0.4
ZNF541-205ENST00000595558 MYH3P11055 1940 aa17.53■□□□□ 0.4
ZNF541-205ENST00000595558 FAM205CA6NFA0 338 aa17.52■□□□□ 0.4
ZNF541-205ENST00000595558 FMNL1O95466 1100 aaPredicted RBP17.52■□□□□ 0.4
ZNF541-205ENST00000595558 MMP1P03956 469 aa17.52■□□□□ 0.4
ZNF541-205ENST00000595558 CDK11BP21127 795 aaKnown RBP17.52■□□□□ 0.4
ZNF541-205ENST00000595558 GPR101Q96P66 508 aaPredicted RBP17.52■□□□□ 0.4
ZNF541-205ENST00000595558 ARHGAP6O43182 974 aa17.52■□□□□ 0.4
ZNF541-205ENST00000595558 ZNF18P17022 549 aa17.52■□□□□ 0.4
ZNF541-205ENST00000595558 KARSQ15046 597 aaKnown RBP17.52■□□□□ 0.4
ZNF541-205ENST00000595558 MFSD6Q6ZSS7 791 aa17.52■□□□□ 0.4
ZNF541-205ENST00000595558 ZBTB9Q96C00 473 aa17.52■□□□□ 0.4
ZNF541-205ENST00000595558 COL14A1Q05707 1796 aaKnown RBP17.52■□□□□ 0.39
ZNF541-205ENST00000595558 SASH3O75995 380 aa17.51■□□□□ 0.39
ZNF541-205ENST00000595558 SHISA4Q96DD7 197 aa17.51■□□□□ 0.39
ZNF541-205ENST00000595558 NOL10Q9BSC4 688 aaKnown RBP17.51■□□□□ 0.39
ZNF541-205ENST00000595558 NMT2O60551 498 aa17.51■□□□□ 0.39
ZNF541-205ENST00000595558 AKNAD1Q5T1N1 836 aa17.51■□□□□ 0.39
ZNF541-205ENST00000595558 MINPP1Q9UNW1 487 aa17.51■□□□□ 0.39
ZNF541-205ENST00000595558 POLR3GO15318 223 aaPredicted RBP17.51■□□□□ 0.39
ZNF541-205ENST00000595558 TEX33O43247 280 aa17.51■□□□□ 0.39
ZNF541-205ENST00000595558 CCP110O43303 1012 aa17.51■□□□□ 0.39
ZNF541-205ENST00000595558 PTPREP23469 700 aa17.51■□□□□ 0.39
ZNF541-205ENST00000595558 ZBTB22O15209 634 aa17.5■□□□□ 0.39
ZNF541-205ENST00000595558 ZSCAN12O43309 604 aa17.5■□□□□ 0.39
ZNF541-205ENST00000595558 IFNAR1P17181 557 aa17.5■□□□□ 0.39
ZNF541-205ENST00000595558 LIFRP42702 1097 aa17.5■□□□□ 0.39
ZNF541-205ENST00000595558 SARSP49591 514 aaKnown RBP17.5■□□□□ 0.39
ZNF541-205ENST00000595558 SPECC1LQ69YQ0 1117 aa17.5■□□□□ 0.39
ZNF541-205ENST00000595558 TMCO3Q6UWJ1 677 aa17.5■□□□□ 0.39
ZNF541-205ENST00000595558 MRPL44Q9H9J2 332 aaKnown RBP17.5■□□□□ 0.39
ZNF541-205ENST00000595558 ZCCHC17Q9NP64 241 aaKnown RBP17.5■□□□□ 0.39
ZNF541-205ENST00000595558 COL1A1P02452 1464 aaPredicted RBP17.5■□□□□ 0.39
ZNF541-205ENST00000595558 A0A087X0B3 334 aa17.5■□□□□ 0.39
ZNF541-205ENST00000595558 COBLO75128 1261 aa17.5■□□□□ 0.39
ZNF541-205ENST00000595558 TUBB4AP04350 444 aa17.5■□□□□ 0.39
ZNF541-205ENST00000595558 MORC3Q14149 939 aa17.5■□□□□ 0.39
ZNF541-205ENST00000595558 DHX8Q14562 1220 aaKnown RBP17.5■□□□□ 0.39
ZNF541-205ENST00000595558 ANKRD18AQ8IVF6 992 aa17.5■□□□□ 0.39
ZNF541-205ENST00000595558 FAM84BQ96KN1 310 aaPredicted RBP17.5■□□□□ 0.39
ZNF541-205ENST00000595558 CSRNP2Q9H175 543 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms