RNA–Protein interactions for RNA: ENST00000595343.5

PDE4C-208, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best)

Gene PDE4C, Length 420 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-208ENST00000595343 MAST2Q6P0Q8 1798 aa22.84■■□□□ 1.25
PDE4C-208ENST00000595343 C19orf81C9J6K1 198 aa22.84■■□□□ 1.25
PDE4C-208ENST00000595343 CYP2E1P05181 493 aaPredicted RBP22.84■■□□□ 1.25
PDE4C-208ENST00000595343 CYP2B6P20813 491 aa22.84■■□□□ 1.25
PDE4C-208ENST00000595343 MNX1P50219 401 aaPredicted RBP22.84■■□□□ 1.25
PDE4C-208ENST00000595343 POLA2Q14181 598 aa22.84■■□□□ 1.25
PDE4C-208ENST00000595343 SHROOM1Q2M3G4 852 aaPredicted RBP22.84■■□□□ 1.25
PDE4C-208ENST00000595343 C7orf61Q8IZ16 206 aa22.84■■□□□ 1.25
PDE4C-208ENST00000595343 CRACR2BQ8N4Y2 399 aaPredicted RBP22.84■■□□□ 1.25
PDE4C-208ENST00000595343 GPRC5AQ8NFJ5 357 aa22.84■■□□□ 1.25
PDE4C-208ENST00000595343 NBPF3Q9H094 633 aa22.84■■□□□ 1.25
PDE4C-208ENST00000595343 TXNRD2Q9NNW7 524 aa22.84■■□□□ 1.25
PDE4C-208ENST00000595343 PALD1Q9ULE6 856 aa22.84■■□□□ 1.25
PDE4C-208ENST00000595343 LAMA3Q16787 3333 aa22.84■■□□□ 1.25
PDE4C-208ENST00000595343 USP17L10C9JJH3 530 aa22.83■■□□□ 1.25
PDE4C-208ENST00000595343 GDF11O95390 407 aa22.83■■□□□ 1.25
PDE4C-208ENST00000595343 HERVK_113P62684 666 aa22.83■■□□□ 1.25
PDE4C-208ENST00000595343 LRCH3Q96II8 777 aa22.83■■□□□ 1.25
PDE4C-208ENST00000595343 GDF15Q99988 308 aa22.83■■□□□ 1.25
PDE4C-208ENST00000595343 NUDT12Q9BQG2 462 aa22.83■■□□□ 1.25
PDE4C-208ENST00000595343 TRIM34Q9BYJ4 488 aa22.83■■□□□ 1.25
PDE4C-208ENST00000595343 GINM1Q9NU53 330 aa22.83■■□□□ 1.25
PDE4C-208ENST00000595343 CDK5RAP2Q96SN8 1893 aa22.82■■□□□ 1.24
PDE4C-208ENST00000595343 MAP3K21Q5TCX8 1036 aa22.82■■□□□ 1.24
PDE4C-208ENST00000595343 C11orf49Q9H6J7 331 aa22.82■■□□□ 1.24
PDE4C-208ENST00000595343 RBPJLQ9UBG7 517 aa22.82■■□□□ 1.24
PDE4C-208ENST00000595343 OGDHLQ9ULD0 1010 aa22.82■■□□□ 1.24
PDE4C-208ENST00000595343 ZBTB21Q9ULJ3 1066 aa22.82■■□□□ 1.24
PDE4C-208ENST00000595343 ZMYND8Q9ULU4 1186 aaPredicted RBP22.82■■□□□ 1.24
PDE4C-208ENST00000595343 FOCADQ5VW36 1801 aa22.81■■□□□ 1.24
PDE4C-208ENST00000595343 XRCC5P13010 732 aaKnown RBP22.81■■□□□ 1.24
PDE4C-208ENST00000595343 PRKAR2AP13861 404 aaKnown RBP22.81■■□□□ 1.24
PDE4C-208ENST00000595343 BMP8BP34820 402 aa22.81■■□□□ 1.24
PDE4C-208ENST00000595343 OS9Q13438 667 aaPredicted RBP22.81■■□□□ 1.24
PDE4C-208ENST00000595343 TMEM57Q8N5G2 664 aa22.81■■□□□ 1.24
PDE4C-208ENST00000595343 SSH3Q8TE77 659 aa22.81■■□□□ 1.24
PDE4C-208ENST00000595343 SOCS4Q8WXH5 440 aa22.81■■□□□ 1.24
PDE4C-208ENST00000595343 ZNF512BQ96KM6 892 aaPredicted RBP22.81■■□□□ 1.24
PDE4C-208ENST00000595343 SAP30BPQ9UHR5 308 aaKnown RBP22.81■■□□□ 1.24
PDE4C-208ENST00000595343 IGSF3O75054 1194 aa22.8■■□□□ 1.24
PDE4C-208ENST00000595343 MAPK4P31152 587 aa22.8■■□□□ 1.24
PDE4C-208ENST00000595343 ZAP70P43403 619 aa22.8■■□□□ 1.24
PDE4C-208ENST00000595343 ATP8B2P98198 1209 aa22.8■■□□□ 1.24
PDE4C-208ENST00000595343 Q3C1V9 767 aa22.8■■□□□ 1.24
PDE4C-208ENST00000595343 PIH1D3Q9NQM4 214 aaKnown RBP22.8■■□□□ 1.24
PDE4C-208ENST00000595343 DDX60LQ5H9U9 1706 aaKnown RBP22.79■■□□□ 1.24
PDE4C-208ENST00000595343 CCER2I3L3R5 266 aa22.79■■□□□ 1.24
PDE4C-208ENST00000595343 SURF6O75683 361 aaKnown RBP22.79■■□□□ 1.24
PDE4C-208ENST00000595343 HLA-DOAP06340 250 aa22.79■■□□□ 1.24
PDE4C-208ENST00000595343 ERVK-9P63128 1117 aa22.79■■□□□ 1.24
PDE4C-208ENST00000595343 ERVK-24P63145 666 aa22.79■■□□□ 1.24
PDE4C-208ENST00000595343 DYNLL1P63167 89 aaKnown RBP22.79■■□□□ 1.24
PDE4C-208ENST00000595343 PDE3AQ14432 1141 aa22.79■■□□□ 1.24
PDE4C-208ENST00000595343 EMILIN3Q9NT22 766 aa22.79■■□□□ 1.24
PDE4C-208ENST00000595343 MYO5AQ9Y4I1 1855 aaKnown RBP22.79■■□□□ 1.24
PDE4C-208ENST00000595343 POTEEQ6S8J3 1075 aa22.78■■□□□ 1.24
PDE4C-208ENST00000595343 TRMT44Q8IYL2 757 aaKnown RBP22.78■■□□□ 1.24
PDE4C-208ENST00000595343 GTF3C2Q8WUA4 911 aaPredicted RBP22.78■■□□□ 1.24
PDE4C-208ENST00000595343 USP6NLQ92738 828 aa22.78■■□□□ 1.24
PDE4C-208ENST00000595343 PORCNQ9H237 461 aa22.78■■□□□ 1.24
PDE4C-208ENST00000595343 ZKSCAN1P17029 563 aaPredicted RBP22.77■■□□□ 1.24
PDE4C-208ENST00000595343 SYN1P17600 705 aa22.77■■□□□ 1.24
PDE4C-208ENST00000595343 CYP7A1P22680 504 aa22.77■■□□□ 1.24
PDE4C-208ENST00000595343 CACNB2Q08289 660 aaPredicted RBP22.77■■□□□ 1.24
PDE4C-208ENST00000595343 ZKSCAN2Q63HK3 967 aa22.77■■□□□ 1.24
PDE4C-208ENST00000595343 USP17L2Q6R6M4 530 aa22.77■■□□□ 1.24
PDE4C-208ENST00000595343 GPR142Q7Z601 462 aa22.77■■□□□ 1.24
PDE4C-208ENST00000595343 CCAR1Q8IX12 1150 aaKnown RBP22.77■■□□□ 1.24
PDE4C-208ENST00000595343 PAGR1Q9BTK6 254 aa22.77■■□□□ 1.24
PDE4C-208ENST00000595343 DBNLQ9UJU6 430 aaKnown RBP22.77■■□□□ 1.24
PDE4C-208ENST00000595343 PFASO15067 1338 aa22.77■■□□□ 1.24
PDE4C-208ENST00000595343 GH2P01242 217 aa22.76■■□□□ 1.23
PDE4C-208ENST00000595343 MORN1Q5T089 497 aa22.76■■□□□ 1.23
PDE4C-208ENST00000595343 PLEKHH3Q7Z736 793 aa22.76■■□□□ 1.23
PDE4C-208ENST00000595343 SLC17A8Q8NDX2 589 aa22.76■■□□□ 1.23
PDE4C-208ENST00000595343 TLR7Q9NYK1 1049 aaKnown RBP22.76■■□□□ 1.23
PDE4C-208ENST00000595343 RGS2P41220 211 aa22.75■■□□□ 1.23
PDE4C-208ENST00000595343 MAGEA10P43363 369 aaPredicted RBP22.75■■□□□ 1.23
PDE4C-208ENST00000595343 CCL14Q16627 93 aa22.75■■□□□ 1.23
PDE4C-208ENST00000595343 C1orf115Q9H7X2 142 aa22.75■■□□□ 1.23
PDE4C-208ENST00000595343 NOP58Q9Y2X3 529 aaKnown RBP22.75■■□□□ 1.23
PDE4C-208ENST00000595343 IDH1O75874 414 aaKnown RBP22.74■■□□□ 1.23
PDE4C-208ENST00000595343 TATDN1Q6P1N9 297 aa22.74■■□□□ 1.23
PDE4C-208ENST00000595343 MIGA1Q8NAN2 632 aa22.74■■□□□ 1.23
PDE4C-208ENST00000595343 CCDC8Q9H0W5 538 aaPredicted RBP22.74■■□□□ 1.23
PDE4C-208ENST00000595343 COL6A3P12111 3177 aa22.73■■□□□ 1.23
PDE4C-208ENST00000595343 COL6A1P12109 1028 aa22.73■■□□□ 1.23
PDE4C-208ENST00000595343 CCND3P30281 292 aaPredicted RBP22.73■■□□□ 1.23
PDE4C-208ENST00000595343 USP5P45974 858 aa22.73■■□□□ 1.23
PDE4C-208ENST00000595343 ZYXQ15942 572 aaKnown RBP22.73■■□□□ 1.23
PDE4C-208ENST00000595343 LHX8Q68G74 356 aa22.73■■□□□ 1.23
PDE4C-208ENST00000595343 GPR153Q6NV75 609 aa22.73■■□□□ 1.23
PDE4C-208ENST00000595343 EAF2Q96CJ1 260 aaPredicted RBP22.73■■□□□ 1.23
PDE4C-208ENST00000595343 C12orf42Q96LP6 360 aa22.73■■□□□ 1.23
PDE4C-208ENST00000595343 APBA2Q99767 749 aa22.73■■□□□ 1.23
PDE4C-208ENST00000595343 USP17L15C9J2P7 530 aa22.72■■□□□ 1.23
PDE4C-208ENST00000595343 USP17L13C9JLJ4 530 aa22.72■■□□□ 1.23
PDE4C-208ENST00000595343 USP17L11C9JVI0 530 aa22.72■■□□□ 1.23
PDE4C-208ENST00000595343 USP17L18D6R9N7 530 aa22.72■■□□□ 1.23
PDE4C-208ENST00000595343 USP17L22D6RA61 530 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms