RNA–Protein interactions for RNA: ENST00000594724.5

USE1-205, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-205ENST00000594724 MX1P20591 662 aa17.79■□□□□ 0.44
USE1-205ENST00000594724 AAMPQ13685 434 aa17.79■□□□□ 0.44
USE1-205ENST00000594724 TREML2Q5T2D2 321 aa17.79■□□□□ 0.44
USE1-205ENST00000594724 PARK7Q99497 189 aaKnown RBP17.79■□□□□ 0.44
USE1-205ENST00000594724 WDR18Q9BV38 432 aa17.79■□□□□ 0.44
USE1-205ENST00000594724 TBC1D2Q9BYX2 928 aa17.79■□□□□ 0.44
USE1-205ENST00000594724 ZBTB21Q9ULJ3 1066 aa17.79■□□□□ 0.44
USE1-205ENST00000594724 PTPN22Q9Y2R2 807 aa17.79■□□□□ 0.44
USE1-205ENST00000594724 ERC2O15083 957 aa17.78■□□□□ 0.44
USE1-205ENST00000594724 SHMT1P34896 483 aa17.78■□□□□ 0.44
USE1-205ENST00000594724 LACTBP83111 547 aaPredicted RBP17.78■□□□□ 0.44
USE1-205ENST00000594724 KIF22Q14807 665 aa17.78■□□□□ 0.44
USE1-205ENST00000594724 CERKLQ49MI3 558 aaPredicted RBP17.78■□□□□ 0.44
USE1-205ENST00000594724 PROCA1Q8NCQ7 364 aaPredicted RBP17.78■□□□□ 0.44
USE1-205ENST00000594724 ATP8A2Q9NTI2 1148 aa17.78■□□□□ 0.44
USE1-205ENST00000594724 GINM1Q9NU53 330 aa17.78■□□□□ 0.44
USE1-205ENST00000594724 AGTPBP1Q9UPW5 1226 aa17.78■□□□□ 0.44
USE1-205ENST00000594724 SLC4A4Q9Y6R1 1079 aa17.78■□□□□ 0.44
USE1-205ENST00000594724 SALL3Q9BXA9 1300 aa17.77■□□□□ 0.44
USE1-205ENST00000594724 SMIM22K7EJ46 135 aa17.77■□□□□ 0.44
USE1-205ENST00000594724 RNF113AO15541 343 aaKnown RBP17.77■□□□□ 0.44
USE1-205ENST00000594724 GLRX3O76003 335 aaKnown RBP17.77■□□□□ 0.44
USE1-205ENST00000594724 IGHDP01880 384 aa17.77■□□□□ 0.44
USE1-205ENST00000594724 GABPAQ06546 454 aa17.77■□□□□ 0.44
USE1-205ENST00000594724 MTMR2Q13614 643 aa17.77■□□□□ 0.44
USE1-205ENST00000594724 ARHGEF6Q15052 776 aa17.77■□□□□ 0.44
USE1-205ENST00000594724 SH3D19Q5HYK7 790 aa17.77■□□□□ 0.44
USE1-205ENST00000594724 OSBP2Q969R2 916 aa17.77■□□□□ 0.44
USE1-205ENST00000594724 DYNLL2Q96FJ2 89 aa17.77■□□□□ 0.44
USE1-205ENST00000594724 RWDD1Q9H446 243 aaPredicted RBP17.77■□□□□ 0.44
USE1-205ENST00000594724 SLC45A1Q9Y2W3 748 aa17.77■□□□□ 0.44
USE1-205ENST00000594724 PTPRFP10586 1907 aa17.76■□□□□ 0.43
USE1-205ENST00000594724 CYP2D7A0A087X1C5 515 aa17.76■□□□□ 0.43
USE1-205ENST00000594724 BCRP11274 1271 aa17.76■□□□□ 0.43
USE1-205ENST00000594724 CTGFP29279 349 aa17.76■□□□□ 0.43
USE1-205ENST00000594724 SOX10P56693 466 aa17.76■□□□□ 0.43
USE1-205ENST00000594724 BACE1P56817 501 aa17.76■□□□□ 0.43
USE1-205ENST00000594724 IRX6P78412 446 aaPredicted RBP17.76■□□□□ 0.43
USE1-205ENST00000594724 ABCB5Q2M3G0 1257 aa17.76■□□□□ 0.43
USE1-205ENST00000594724 B4GALNT3Q6L9W6 998 aa17.76■□□□□ 0.43
USE1-205ENST00000594724 STRBPQ96SI9 672 aaKnown RBP17.76■□□□□ 0.43
USE1-205ENST00000594724 NAV1Q8NEY1 1877 aa17.75■□□□□ 0.43
USE1-205ENST00000594724 DDX60LQ5H9U9 1706 aaKnown RBP17.75■□□□□ 0.43
USE1-205ENST00000594724 MYH7P12883 1935 aa17.75■□□□□ 0.43
USE1-205ENST00000594724 USP17L10C9JJH3 530 aa17.75■□□□□ 0.43
USE1-205ENST00000594724 USP17L12C9JPN9 530 aa17.75■□□□□ 0.43
USE1-205ENST00000594724 USP17L21D6R901 530 aa17.75■□□□□ 0.43
USE1-205ENST00000594724 PSMC4P43686 418 aa17.75■□□□□ 0.43
USE1-205ENST00000594724 RAB3GAP1Q15042 981 aa17.75■□□□□ 0.43
USE1-205ENST00000594724 SLC44A5Q8NCS7 719 aa17.75■□□□□ 0.43
USE1-205ENST00000594724 SMCR8Q8TEV9 937 aaPredicted RBP17.75■□□□□ 0.43
USE1-205ENST00000594724 APPBP2Q92624 585 aa17.75■□□□□ 0.43
USE1-205ENST00000594724 LNPKQ9C0E8 428 aa17.75■□□□□ 0.43
USE1-205ENST00000594724 CABP5Q9NP86 173 aa17.75■□□□□ 0.43
USE1-205ENST00000594724 ZSWIM8A7E2V4 1837 aa17.75■□□□□ 0.43
USE1-205ENST00000594724 C19orf81C9J6K1 198 aa17.74■□□□□ 0.43
USE1-205ENST00000594724 ZFYP08048 801 aaPredicted RBP17.74■□□□□ 0.43
USE1-205ENST00000594724 C12orf60Q5U649 245 aa17.74■□□□□ 0.43
USE1-205ENST00000594724 SMC5Q8IY18 1101 aa17.74■□□□□ 0.43
USE1-205ENST00000594724 SEC62Q99442 399 aaKnown RBP17.74■□□□□ 0.43
USE1-205ENST00000594724 FSD1Q9BTV5 496 aa17.74■□□□□ 0.43
USE1-205ENST00000594724 TMOD4Q9NZQ9 345 aa17.74■□□□□ 0.43
USE1-205ENST00000594724 PTCH2Q9Y6C5 1203 aa17.74■□□□□ 0.43
USE1-205ENST00000594724 M0R2C6 588 aa17.73■□□□□ 0.43
USE1-205ENST00000594724 MPHOSPH10O00566 681 aaKnown RBP17.73■□□□□ 0.43
USE1-205ENST00000594724 FMNL1O95466 1100 aaPredicted RBP17.73■□□□□ 0.43
USE1-205ENST00000594724 GUCY1A2P33402 732 aa17.73■□□□□ 0.43
USE1-205ENST00000594724 PDE1AP54750 535 aa17.73■□□□□ 0.43
USE1-205ENST00000594724 ZYXQ15942 572 aaKnown RBP17.73■□□□□ 0.43
USE1-205ENST00000594724 CTR9Q6PD62 1173 aa17.73■□□□□ 0.43
USE1-205ENST00000594724 DDRGK1Q96HY6 314 aa17.73■□□□□ 0.43
USE1-205ENST00000594724 TRIM47Q96LD4 638 aa17.73■□□□□ 0.43
USE1-205ENST00000594724 ASCC2Q9H1I8 757 aaPredicted RBP17.73■□□□□ 0.43
USE1-205ENST00000594724 EMILIN3Q9NT22 766 aa17.73■□□□□ 0.43
USE1-205ENST00000594724 STAP2Q9UGK3 403 aa17.73■□□□□ 0.43
USE1-205ENST00000594724 PNMA3Q9UL41 463 aa17.73■□□□□ 0.43
USE1-205ENST00000594724 GSG1L2A8MUP6 293 aa17.72■□□□□ 0.43
USE1-205ENST00000594724 OSBPP22059 807 aa17.72■□□□□ 0.43
USE1-205ENST00000594724 RGS19P49795 217 aa17.72■□□□□ 0.43
USE1-205ENST00000594724 PABPC4Q13310 644 aaKnown RBP eCLIP17.72■□□□□ 0.43
USE1-205ENST00000594724 SEPT2Q15019 361 aa17.72■□□□□ 0.43
USE1-205ENST00000594724 AMOTL1Q8IY63 956 aa17.72■□□□□ 0.43
USE1-205ENST00000594724 ANKRD13CQ8N6S4 541 aa17.72■□□□□ 0.43
USE1-205ENST00000594724 ACER1Q8TDN7 264 aa17.72■□□□□ 0.43
USE1-205ENST00000594724 BAZ2AQ9UIF9 1905 aaKnown RBP17.71■□□□□ 0.43
USE1-205ENST00000594724 GPAA1O43292 621 aa17.71■□□□□ 0.43
USE1-205ENST00000594724 CDK8P49336 464 aa17.71■□□□□ 0.43
USE1-205ENST00000594724 LRRFIP1Q32MZ4 808 aaKnown RBP17.71■□□□□ 0.43
USE1-205ENST00000594724 USP17L2Q6R6M4 530 aa17.71■□□□□ 0.43
USE1-205ENST00000594724 FEZ1Q99689 392 aa17.71■□□□□ 0.43
USE1-205ENST00000594724 SWAP70Q9UH65 585 aa17.71■□□□□ 0.43
USE1-205ENST00000594724 LOC285556D6RIA3 1793 aa17.71■□□□□ 0.43
USE1-205ENST00000594724 GNRH1P01148 92 aa17.7■□□□□ 0.42
USE1-205ENST00000594724 HOXA7P31268 230 aaPredicted RBP17.7■□□□□ 0.42
USE1-205ENST00000594724 IRX3P78415 501 aaPredicted RBP17.7■□□□□ 0.42
USE1-205ENST00000594724 CHD1LQ86WJ1 897 aa17.7■□□□□ 0.42
USE1-205ENST00000594724 STK11IPQ8N1F8 1099 aa17.7■□□□□ 0.42
USE1-205ENST00000594724 P2RX7Q99572 595 aaKnown RBP17.7■□□□□ 0.42
USE1-205ENST00000594724 SRRDQ9UH36 339 aa17.7■□□□□ 0.42
USE1-205ENST00000594724 HTTP42858 3142 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms