RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 GOLGA6L4A6NEF3 574 aa17.68■□□□□ 0.42
PNKP-204ENST00000594661 SLU7O95391 586 aaKnown RBP17.68■□□□□ 0.42
PNKP-204ENST00000594661 FDPSP14324 419 aaKnown RBP17.68■□□□□ 0.42
PNKP-204ENST00000594661 TPM4P67936 248 aa17.68■□□□□ 0.42
PNKP-204ENST00000594661 TMEM67Q5HYA8 995 aa17.68■□□□□ 0.42
PNKP-204ENST00000594661 SPTY2D1Q68D10 685 aaPredicted RBP17.68■□□□□ 0.42
PNKP-204ENST00000594661 GIMAP6Q6P9H5 292 aa17.68■□□□□ 0.42
PNKP-204ENST00000594661 NEK11Q8NG66 645 aa17.68■□□□□ 0.42
PNKP-204ENST00000594661 FAM200AQ8TCP9 573 aa17.68■□□□□ 0.42
PNKP-204ENST00000594661 TOMM22Q9NS69 142 aa17.68■□□□□ 0.42
PNKP-204ENST00000594661 ANAPC4Q9UJX5 808 aa17.68■□□□□ 0.42
PNKP-204ENST00000594661 PARP3Q9Y6F1 533 aa17.68■□□□□ 0.42
PNKP-204ENST00000594661 KIAA1551Q9HCM1 1747 aa17.68■□□□□ 0.42
PNKP-204ENST00000594661 PNMA6AP0CW24 399 aaPredicted RBP17.68■□□□□ 0.42
PNKP-204ENST00000594661 EZH2Q15910 746 aaKnown RBP17.68■□□□□ 0.42
PNKP-204ENST00000594661 APOA5Q6Q788 366 aa17.68■□□□□ 0.42
PNKP-204ENST00000594661 KRBA2Q6ZNG9 492 aa17.68■□□□□ 0.42
PNKP-204ENST00000594661 LDHBP07195 334 aaKnown RBP17.67■□□□□ 0.42
PNKP-204ENST00000594661 CCDC192P0DO97 292 aa17.67■□□□□ 0.42
PNKP-204ENST00000594661 RXRAP19793 462 aa17.67■□□□□ 0.42
PNKP-204ENST00000594661 PLA2G4DQ86XP0 818 aa17.67■□□□□ 0.42
PNKP-204ENST00000594661 SP8Q8IXZ3 490 aa17.67■□□□□ 0.42
PNKP-204ENST00000594661 C10orf67Q8IYJ2 551 aa17.67■□□□□ 0.42
PNKP-204ENST00000594661 IFIT3O14879 490 aaKnown RBP17.66■□□□□ 0.42
PNKP-204ENST00000594661 TRIM66O15016 1216 aa17.66■□□□□ 0.42
PNKP-204ENST00000594661 IL1R1P14778 569 aa17.66■□□□□ 0.42
PNKP-204ENST00000594661 EN1Q05925 392 aaPredicted RBP17.66■□□□□ 0.42
PNKP-204ENST00000594661 OLFM4Q6UX06 510 aa17.66■□□□□ 0.42
PNKP-204ENST00000594661 SGMS1Q86VZ5 419 aa17.66■□□□□ 0.42
PNKP-204ENST00000594661 ZKSCAN3Q9BRR0 538 aa17.66■□□□□ 0.42
PNKP-204ENST00000594661 RNF41Q9H4P4 317 aaPredicted RBP17.66■□□□□ 0.42
PNKP-204ENST00000594661 CWC15Q9P013 229 aaKnown RBP17.66■□□□□ 0.42
PNKP-204ENST00000594661 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.66■□□□□ 0.42
PNKP-204ENST00000594661 ATP6V0A2Q9Y487 856 aa17.66■□□□□ 0.42
PNKP-204ENST00000594661 V9GYY5 206 aaPredicted RBP17.66■□□□□ 0.42
PNKP-204ENST00000594661 C6orf229H3BNL8 230 aa17.66■□□□□ 0.42
PNKP-204ENST00000594661 NPR1P16066 1061 aa17.66■□□□□ 0.42
PNKP-204ENST00000594661 LIG1P18858 919 aa17.66■□□□□ 0.42
PNKP-204ENST00000594661 EVX2Q03828 476 aa17.66■□□□□ 0.42
PNKP-204ENST00000594661 TMC4Q7Z404 712 aa17.66■□□□□ 0.42
PNKP-204ENST00000594661 CRNKL1Q9BZJ0 848 aaKnown RBP17.66■□□□□ 0.42
PNKP-204ENST00000594661 UBXN6Q9BZV1 441 aa17.66■□□□□ 0.42
PNKP-204ENST00000594661 MYH15Q9Y2K3 1946 aa17.66■□□□□ 0.42
PNKP-204ENST00000594661 DUOX1Q9NRD9 1551 aa17.66■□□□□ 0.42
PNKP-204ENST00000594661 LIFRP42702 1097 aa17.65■□□□□ 0.42
PNKP-204ENST00000594661 METAP2P50579 478 aaKnown RBP eCLIP17.65■□□□□ 0.42
PNKP-204ENST00000594661 DIXDC1Q155Q3 683 aa17.65■□□□□ 0.42
PNKP-204ENST00000594661 TMED8Q6PL24 325 aaPredicted RBP17.65■□□□□ 0.42
PNKP-204ENST00000594661 NFXL1Q6ZNB6 911 aa17.65■□□□□ 0.42
PNKP-204ENST00000594661 MICU3Q86XE3 530 aa17.65■□□□□ 0.42
PNKP-204ENST00000594661 CAMKK2Q96RR4 588 aa17.65■□□□□ 0.42
PNKP-204ENST00000594661 MYL10Q9BUA6 226 aa17.65■□□□□ 0.42
PNKP-204ENST00000594661 TMX1Q9H3N1 280 aa17.65■□□□□ 0.42
PNKP-204ENST00000594661 DCP1AQ9NPI6 582 aaPredicted RBP17.65■□□□□ 0.42
PNKP-204ENST00000594661 LCMT1Q9UIC8 334 aa17.65■□□□□ 0.42
PNKP-204ENST00000594661 CFAP45Q9UL16 551 aa17.65■□□□□ 0.42
PNKP-204ENST00000594661 USP17L12C9JPN9 530 aa17.65■□□□□ 0.42
PNKP-204ENST00000594661 USP17L21D6R901 530 aa17.65■□□□□ 0.42
PNKP-204ENST00000594661 ZRANB2O95218 330 aaKnown RBP eCLIP17.65■□□□□ 0.42
PNKP-204ENST00000594661 ADD1P35611 737 aaKnown RBP17.65■□□□□ 0.42
PNKP-204ENST00000594661 PDE6BP35913 854 aa17.65■□□□□ 0.42
PNKP-204ENST00000594661 ZNF75DP51815 510 aa17.65■□□□□ 0.42
PNKP-204ENST00000594661 GYS2P54840 703 aa17.65■□□□□ 0.42
PNKP-204ENST00000594661 GUCY1B3Q02153 619 aa17.65■□□□□ 0.42
PNKP-204ENST00000594661 SRLQ86TD4 932 aa17.65■□□□□ 0.42
PNKP-204ENST00000594661 ZNF592Q92610 1267 aa17.65■□□□□ 0.42
PNKP-204ENST00000594661 LAMB1P07942 1786 aa17.64■□□□□ 0.41
PNKP-204ENST00000594661 CPLX1O14810 134 aa17.64■□□□□ 0.41
PNKP-204ENST00000594661 CDC27P30260 824 aa17.64■□□□□ 0.41
PNKP-204ENST00000594661 ZSCAN26Q16670 478 aa17.64■□□□□ 0.41
PNKP-204ENST00000594661 CCDC144CPQ8IYA2 1237 aa17.64■□□□□ 0.41
PNKP-204ENST00000594661 GOLGA6L1Q8N7Z2 621 aa17.64■□□□□ 0.41
PNKP-204ENST00000594661 NRBP1Q9UHY1 535 aa17.64■□□□□ 0.41
PNKP-204ENST00000594661 KCNG1Q9UIX4 513 aa17.64■□□□□ 0.41
PNKP-204ENST00000594661 ZBTB43O43298 467 aa17.63■□□□□ 0.41
PNKP-204ENST00000594661 CLCN6P51797 869 aa17.63■□□□□ 0.41
PNKP-204ENST00000594661 GPS2Q13227 327 aa17.63■□□□□ 0.41
PNKP-204ENST00000594661 PTPN14Q15678 1187 aa17.63■□□□□ 0.41
PNKP-204ENST00000594661 SLC15A2Q16348 729 aa17.63■□□□□ 0.41
PNKP-204ENST00000594661 IQUBQ8NA54 791 aa17.63■□□□□ 0.41
PNKP-204ENST00000594661 CACTINQ8WUQ7 758 aaKnown RBP17.63■□□□□ 0.41
PNKP-204ENST00000594661 NUP62CLQ9H1M0 184 aa17.63■□□□□ 0.41
PNKP-204ENST00000594661 KCND1Q9NSA2 647 aa17.63■□□□□ 0.41
PNKP-204ENST00000594661 CDC25BP30305 580 aa17.63■□□□□ 0.41
PNKP-204ENST00000594661 CEBPZQ03701 1054 aaKnown RBP17.63■□□□□ 0.41
PNKP-204ENST00000594661 PGBD1Q96JS3 809 aa17.63■□□□□ 0.41
PNKP-204ENST00000594661 ATP8A2Q9NTI2 1148 aa17.63■□□□□ 0.41
PNKP-204ENST00000594661 ORC3Q9UBD5 711 aaPredicted RBP17.63■□□□□ 0.41
PNKP-204ENST00000594661 CCDC69A6NI79 296 aa17.62■□□□□ 0.41
PNKP-204ENST00000594661 NEMFO60524 1076 aa17.62■□□□□ 0.41
PNKP-204ENST00000594661 PRDM1O75626 825 aa17.62■□□□□ 0.41
PNKP-204ENST00000594661 CYP2D6P10635 497 aa17.62■□□□□ 0.41
PNKP-204ENST00000594661 WTAPQ15007 396 aa17.62■□□□□ 0.41
PNKP-204ENST00000594661 BICD2Q8TD16 824 aa17.62■□□□□ 0.41
PNKP-204ENST00000594661 MASTLQ96GX5 879 aa17.62■□□□□ 0.41
PNKP-204ENST00000594661 FAM217BQ9NTX9 383 aaPredicted RBP17.62■□□□□ 0.41
PNKP-204ENST00000594661 DACT1Q9NYF0 836 aa17.62■□□□□ 0.41
PNKP-204ENST00000594661 JRKLQ9Y4A0 524 aa17.62■□□□□ 0.41
PNKP-204ENST00000594661 SLC12A7Q9Y666 1083 aa17.62■□□□□ 0.41
PNKP-204ENST00000594661 MYH2Q9UKX2 1941 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms