RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 CPA4Q9UI42 421 aa20.89■□□□□ 0.93
IRF3-208ENST00000594387 AGTPBP1Q9UPW5 1226 aa20.89■□□□□ 0.93
IRF3-208ENST00000594387 SUPT16HQ9Y5B9 1047 aaKnown RBP20.89■□□□□ 0.93
IRF3-208ENST00000594387 LOC285556D6RIA3 1793 aa20.88■□□□□ 0.93
IRF3-208ENST00000594387 C19orf81C9J6K1 198 aa20.88■□□□□ 0.93
IRF3-208ENST00000594387 GNRH1P01148 92 aa20.88■□□□□ 0.93
IRF3-208ENST00000594387 OSBPP22059 807 aa20.88■□□□□ 0.93
IRF3-208ENST00000594387 MOGSQ13724 837 aa20.88■□□□□ 0.93
IRF3-208ENST00000594387 GPAT2Q6NUI2 795 aa20.88■□□□□ 0.93
IRF3-208ENST00000594387 WDR18Q9BV38 432 aa20.88■□□□□ 0.93
IRF3-208ENST00000594387 DNAJC18Q9H819 358 aa20.88■□□□□ 0.93
IRF3-208ENST00000594387 DCP1AQ9NPI6 582 aaPredicted RBP20.88■□□□□ 0.93
IRF3-208ENST00000594387 SLC4A4Q9Y6R1 1079 aa20.88■□□□□ 0.93
IRF3-208ENST00000594387 USP17L10C9JJH3 530 aa20.87■□□□□ 0.93
IRF3-208ENST00000594387 HOXD10P28358 340 aa20.87■□□□□ 0.93
IRF3-208ENST00000594387 HMGCS2P54868 508 aa20.87■□□□□ 0.93
IRF3-208ENST00000594387 LACTBP83111 547 aaPredicted RBP20.87■□□□□ 0.93
IRF3-208ENST00000594387 RRP1BQ14684 758 aaKnown RBP20.87■□□□□ 0.93
IRF3-208ENST00000594387 ABCB5Q2M3G0 1257 aa20.87■□□□□ 0.93
IRF3-208ENST00000594387 TSHZ3Q63HK5 1081 aa20.87■□□□□ 0.93
IRF3-208ENST00000594387 C17orf99Q6UX52 265 aa20.87■□□□□ 0.93
IRF3-208ENST00000594387 TAOK2Q9UL54 1235 aa20.87■□□□□ 0.93
IRF3-208ENST00000594387 ZBTB21Q9ULJ3 1066 aa20.87■□□□□ 0.93
IRF3-208ENST00000594387 PTPN22Q9Y2R2 807 aa20.87■□□□□ 0.93
IRF3-208ENST00000594387 DDX60LQ5H9U9 1706 aaKnown RBP20.87■□□□□ 0.93
IRF3-208ENST00000594387 RNF113AO15541 343 aaKnown RBP20.86■□□□□ 0.93
IRF3-208ENST00000594387 CYP2C8P10632 490 aa20.86■□□□□ 0.93
IRF3-208ENST00000594387 PLCD1P51178 756 aa20.86■□□□□ 0.93
IRF3-208ENST00000594387 TATDN1Q6P1N9 297 aa20.86■□□□□ 0.93
IRF3-208ENST00000594387 FMNL1O95466 1100 aaPredicted RBP20.85■□□□□ 0.93
IRF3-208ENST00000594387 GH2P01242 217 aa20.85■□□□□ 0.93
IRF3-208ENST00000594387 PRMT2P55345 433 aa20.85■□□□□ 0.93
IRF3-208ENST00000594387 BACE1P56817 501 aa20.85■□□□□ 0.93
IRF3-208ENST00000594387 MTMR2Q13614 643 aa20.85■□□□□ 0.93
IRF3-208ENST00000594387 RAB3GAP1Q15042 981 aa20.85■□□□□ 0.93
IRF3-208ENST00000594387 EXOC6Q8TAG9 804 aa20.85■□□□□ 0.93
IRF3-208ENST00000594387 APPBP2Q92624 585 aa20.85■□□□□ 0.93
IRF3-208ENST00000594387 FEZ1Q99689 392 aa20.85■□□□□ 0.93
IRF3-208ENST00000594387 FSD1Q9BTV5 496 aa20.85■□□□□ 0.93
IRF3-208ENST00000594387 SWAP70Q9UH65 585 aa20.85■□□□□ 0.93
IRF3-208ENST00000594387 MPHOSPH10O00566 681 aaKnown RBP20.84■□□□□ 0.93
IRF3-208ENST00000594387 SLFNL1Q499Z3 407 aa20.84■□□□□ 0.93
IRF3-208ENST00000594387 SH3D19Q5HYK7 790 aa20.84■□□□□ 0.93
IRF3-208ENST00000594387 NBPF11Q86T75 865 aa20.84■□□□□ 0.93
IRF3-208ENST00000594387 PUS7LQ9H0K6 701 aaKnown RBP20.84■□□□□ 0.93
IRF3-208ENST00000594387 PRKAB2O43741 272 aa20.83■□□□□ 0.93
IRF3-208ENST00000594387 ECM2O94769 699 aaPredicted RBP20.83■□□□□ 0.93
IRF3-208ENST00000594387 GNAT2P19087 354 aa20.83■□□□□ 0.93
IRF3-208ENST00000594387 PSMC4P43686 418 aa20.83■□□□□ 0.93
IRF3-208ENST00000594387 FCGRTP55899 365 aa20.83■□□□□ 0.93
IRF3-208ENST00000594387 IRX3P78415 501 aaPredicted RBP20.83■□□□□ 0.93
IRF3-208ENST00000594387 TREML2Q5T2D2 321 aa20.83■□□□□ 0.93
IRF3-208ENST00000594387 USP17L2Q6R6M4 530 aa20.83■□□□□ 0.93
IRF3-208ENST00000594387 APPP05067 770 aa20.82■□□□□ 0.92
IRF3-208ENST00000594387 GCLCP48506 637 aaPredicted RBP20.82■□□□□ 0.92
IRF3-208ENST00000594387 USP14P54578 494 aa20.82■□□□□ 0.92
IRF3-208ENST00000594387 PI4K2BQ8TCG2 481 aa20.82■□□□□ 0.92
IRF3-208ENST00000594387 ZSWIM8A7E2V4 1837 aa20.82■□□□□ 0.92
IRF3-208ENST00000594387 USP17L12C9JPN9 530 aa20.81■□□□□ 0.92
IRF3-208ENST00000594387 USP17L21D6R901 530 aa20.81■□□□□ 0.92
IRF3-208ENST00000594387 SHMT1P34896 483 aa20.81■□□□□ 0.92
IRF3-208ENST00000594387 B4GALNT3Q6L9W6 998 aa20.81■□□□□ 0.92
IRF3-208ENST00000594387 OTUD7AQ8TE49 926 aaPredicted RBP20.81■□□□□ 0.92
IRF3-208ENST00000594387 STRBPQ96SI9 672 aaKnown RBP20.81■□□□□ 0.92
IRF3-208ENST00000594387 ARPP21Q9UBL0 812 aaPredicted RBP20.81■□□□□ 0.92
IRF3-208ENST00000594387 ADGRA2Q96PE1 1338 aa20.8■□□□□ 0.92
IRF3-208ENST00000594387 BCRP11274 1271 aa20.8■□□□□ 0.92
IRF3-208ENST00000594387 SOX10P56693 466 aa20.8■□□□□ 0.92
IRF3-208ENST00000594387 JAG1P78504 1218 aa20.8■□□□□ 0.92
IRF3-208ENST00000594387 GABPAQ06546 454 aa20.8■□□□□ 0.92
IRF3-208ENST00000594387 SLC9C1Q4G0N8 1177 aa20.8■□□□□ 0.92
IRF3-208ENST00000594387 EVI5LQ96CN4 794 aa20.8■□□□□ 0.92
IRF3-208ENST00000594387 CCDC17Q96LX7 622 aa20.8■□□□□ 0.92
IRF3-208ENST00000594387 ARHGAP39Q9C0H5 1083 aa20.8■□□□□ 0.92
IRF3-208ENST00000594387 CHGBP05060 677 aa20.79■□□□□ 0.92
IRF3-208ENST00000594387 CYP2D6P10635 497 aa20.79■□□□□ 0.92
IRF3-208ENST00000594387 MLLT1Q03111 559 aaPredicted RBP20.79■□□□□ 0.92
IRF3-208ENST00000594387 C12orf60Q5U649 245 aa20.79■□□□□ 0.92
IRF3-208ENST00000594387 GIMAP6Q6P9H5 292 aa20.79■□□□□ 0.92
IRF3-208ENST00000594387 SMC5Q8IY18 1101 aa20.79■□□□□ 0.92
IRF3-208ENST00000594387 ANKRD13CQ8N6S4 541 aa20.79■□□□□ 0.92
IRF3-208ENST00000594387 RAET1EQ8TD07 263 aa20.79■□□□□ 0.92
IRF3-208ENST00000594387 NACAP1Q9BZK3 213 aa20.79■□□□□ 0.92
IRF3-208ENST00000594387 LNPKQ9C0E8 428 aa20.79■□□□□ 0.92
IRF3-208ENST00000594387 ASCC2Q9H1I8 757 aaPredicted RBP20.79■□□□□ 0.92
IRF3-208ENST00000594387 GPAA1O43292 621 aa20.78■□□□□ 0.92
IRF3-208ENST00000594387 HOXA7P31268 230 aaPredicted RBP20.78■□□□□ 0.92
IRF3-208ENST00000594387 TDO2P48775 406 aa20.78■□□□□ 0.92
IRF3-208ENST00000594387 PDE1AP54750 535 aa20.78■□□□□ 0.92
IRF3-208ENST00000594387 ZYXQ15942 572 aaKnown RBP20.78■□□□□ 0.92
IRF3-208ENST00000594387 TMEM179Q6ZVK1 233 aa20.78■□□□□ 0.92
IRF3-208ENST00000594387 OSBP2Q969R2 916 aa20.78■□□□□ 0.92
IRF3-208ENST00000594387 DYNLL2Q96FJ2 89 aa20.78■□□□□ 0.92
IRF3-208ENST00000594387 ZNF287Q9HBT7 754 aa20.78■□□□□ 0.92
IRF3-208ENST00000594387 STAP2Q9UGK3 403 aa20.78■□□□□ 0.92
IRF3-208ENST00000594387 PTCH2Q9Y6C5 1203 aa20.78■□□□□ 0.92
IRF3-208ENST00000594387 DOCK3Q8IZD9 2030 aa20.77■□□□□ 0.92
IRF3-208ENST00000594387 MINDY4BA8MYZ0 360 aa20.77■□□□□ 0.92
IRF3-208ENST00000594387 TNPO2O14787 897 aaKnown RBP20.77■□□□□ 0.92
IRF3-208ENST00000594387 CDK8P49336 464 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms