RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 IRF6O14896 467 aa23.38■■□□□ 1.33
LSM4-203ENST00000593829 SHMT1P34896 483 aa23.38■■□□□ 1.33
LSM4-203ENST00000593829 TM4SF4P48230 202 aa23.38■■□□□ 1.33
LSM4-203ENST00000593829 GTF2A2P52657 109 aa23.38■■□□□ 1.33
LSM4-203ENST00000593829 ZNF589Q86UQ0 364 aaPredicted RBP23.38■■□□□ 1.33
LSM4-203ENST00000593829 NAPBQ9H115 298 aa23.38■■□□□ 1.33
LSM4-203ENST00000593829 GINM1Q9NU53 330 aa23.38■■□□□ 1.33
LSM4-203ENST00000593829 DOCK1Q14185 1865 aa23.38■■□□□ 1.33
LSM4-203ENST00000593829 CERKLQ49MI3 558 aaPredicted RBP23.37■■□□□ 1.33
LSM4-203ENST00000593829 DYNLL2Q96FJ2 89 aa23.37■■□□□ 1.33
LSM4-203ENST00000593829 MINDY4BA8MYZ0 360 aa23.37■■□□□ 1.33
LSM4-203ENST00000593829 GDF11O95390 407 aa23.37■■□□□ 1.33
LSM4-203ENST00000593829 ASNSP08243 561 aa23.37■■□□□ 1.33
LSM4-203ENST00000593829 VPS53Q5VIR6 699 aa23.37■■□□□ 1.33
LSM4-203ENST00000593829 MS4A4AQ96JQ5 239 aa23.37■■□□□ 1.33
LSM4-203ENST00000593829 FOXP2O15409 715 aa23.36■■□□□ 1.33
LSM4-203ENST00000593829 HSPA1AP0DMV8 641 aaKnown RBP23.36■■□□□ 1.33
LSM4-203ENST00000593829 HSPA1BP0DMV9 641 aaKnown RBP23.36■■□□□ 1.33
LSM4-203ENST00000593829 SNAPC2Q13487 334 aa23.36■■□□□ 1.33
LSM4-203ENST00000593829 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.36■■□□□ 1.33
LSM4-203ENST00000593829 SMIM22K7EJ46 135 aa23.35■■□□□ 1.33
LSM4-203ENST00000593829 BMP2KLQ5H9B9 411 aa23.35■■□□□ 1.33
LSM4-203ENST00000593829 C16orf86Q6ZW13 317 aa23.35■■□□□ 1.33
LSM4-203ENST00000593829 SLC44A5Q8NCS7 719 aa23.35■■□□□ 1.33
LSM4-203ENST00000593829 KCNH4Q9UQ05 1017 aa23.35■■□□□ 1.33
LSM4-203ENST00000593829 HSPD1P10809 573 aaKnown RBP23.35■■□□□ 1.33
LSM4-203ENST00000593829 CHMLP26374 656 aa23.35■■□□□ 1.33
LSM4-203ENST00000593829 JAG1P78504 1218 aa23.35■■□□□ 1.33
LSM4-203ENST00000593829 TBC1D2Q9BYX2 928 aa23.35■■□□□ 1.33
LSM4-203ENST00000593829 ZBTB21Q9ULJ3 1066 aa23.35■■□□□ 1.33
LSM4-203ENST00000593829 AFG3L2Q9Y4W6 797 aa23.35■■□□□ 1.33
LSM4-203ENST00000593829 TESPA1A2RU30 521 aaPredicted RBP23.34■■□□□ 1.33
LSM4-203ENST00000593829 USP17L5A8MUK1 530 aa23.34■■□□□ 1.33
LSM4-203ENST00000593829 CXCL11O14625 94 aa23.34■■□□□ 1.33
LSM4-203ENST00000593829 CETPP11597 493 aa23.34■■□□□ 1.33
LSM4-203ENST00000593829 CDK8P49336 464 aa23.34■■□□□ 1.33
LSM4-203ENST00000593829 ALX1Q15699 326 aa23.34■■□□□ 1.33
LSM4-203ENST00000593829 ABCB5Q2M3G0 1257 aa23.34■■□□□ 1.33
LSM4-203ENST00000593829 RUFY2Q8WXA3 655 aa23.34■■□□□ 1.33
LSM4-203ENST00000593829 CCL15-CCL14A0A0B4J2E2 113 aa23.33■■□□□ 1.33
LSM4-203ENST00000593829 CA12O43570 354 aa23.33■■□□□ 1.33
LSM4-203ENST00000593829 GH2P01242 217 aa23.33■■□□□ 1.33
LSM4-203ENST00000593829 CCL15Q16663 113 aa23.33■■□□□ 1.33
LSM4-203ENST00000593829 SHROOM1Q2M3G4 852 aaPredicted RBP23.33■■□□□ 1.33
LSM4-203ENST00000593829 CCDC84Q86UT8 332 aaPredicted RBP23.33■■□□□ 1.33
LSM4-203ENST00000593829 CABP5Q9NP86 173 aa23.33■■□□□ 1.33
LSM4-203ENST00000593829 LAMB1P07942 1786 aa23.33■■□□□ 1.33
LSM4-203ENST00000593829 IFNL1Q8IU54 200 aa23.33■■□□□ 1.32
LSM4-203ENST00000593829 AS3MTQ9HBK9 375 aa23.33■■□□□ 1.32
LSM4-203ENST00000593829 ATAD5Q96QE3 1844 aa23.33■■□□□ 1.32
LSM4-203ENST00000593829 ROBO3Q96MS0 1386 aa23.33■■□□□ 1.32
LSM4-203ENST00000593829 BRI3BPQ8WY22 251 aa23.32■■□□□ 1.32
LSM4-203ENST00000593829 RNF186Q9NXI6 227 aa23.32■■□□□ 1.32
LSM4-203ENST00000593829 RAD50Q92878 1312 aa23.32■■□□□ 1.32
LSM4-203ENST00000593829 FGAP02671 866 aa23.31■■□□□ 1.32
LSM4-203ENST00000593829 OTUD7BQ6GQQ9 843 aa23.31■■□□□ 1.32
LSM4-203ENST00000593829 ZNF280CQ8ND82 737 aa23.31■■□□□ 1.32
LSM4-203ENST00000593829 SAGE1Q9NXZ1 904 aa23.31■■□□□ 1.32
LSM4-203ENST00000593829 TRIM75PA6NK02 468 aa23.31■■□□□ 1.32
LSM4-203ENST00000593829 ZMYM6O95789 1325 aa23.31■■□□□ 1.32
LSM4-203ENST00000593829 ALDH1A1P00352 501 aa23.31■■□□□ 1.32
LSM4-203ENST00000593829 SLC3A2P08195 630 aaKnown RBP23.31■■□□□ 1.32
LSM4-203ENST00000593829 PPARAQ07869 468 aa23.31■■□□□ 1.32
LSM4-203ENST00000593829 CCDC17Q96LX7 622 aa23.31■■□□□ 1.32
LSM4-203ENST00000593829 PTPN18Q99952 460 aa23.31■■□□□ 1.32
LSM4-203ENST00000593829 WDR18Q9BV38 432 aa23.31■■□□□ 1.32
LSM4-203ENST00000593829 ZNF287Q9HBT7 754 aa23.31■■□□□ 1.32
LSM4-203ENST00000593829 IGF2BP3O00425 579 aaKnown RBP eCLIP23.3■■□□□ 1.32
LSM4-203ENST00000593829 MPHOSPH10O00566 681 aaKnown RBP23.3■■□□□ 1.32
LSM4-203ENST00000593829 FOXN1O15353 648 aa23.3■■□□□ 1.32
LSM4-203ENST00000593829 TRPA1O75762 1119 aa23.3■■□□□ 1.32
LSM4-203ENST00000593829 SPP2Q13103 211 aa23.3■■□□□ 1.32
LSM4-203ENST00000593829 STK11IPQ8N1F8 1099 aa23.3■■□□□ 1.32
LSM4-203ENST00000593829 MKNK2Q9HBH9 465 aa23.3■■□□□ 1.32
LSM4-203ENST00000593829 RAB3GAP1Q15042 981 aa23.29■■□□□ 1.32
LSM4-203ENST00000593829 IL25Q9H293 177 aa23.29■■□□□ 1.32
LSM4-203ENST00000593829 PHIPQ8WWQ0 1821 aa23.29■■□□□ 1.32
LSM4-203ENST00000593829 A0A0G2JLL6 359 aaPredicted RBP23.29■■□□□ 1.32
LSM4-203ENST00000593829 PRRT2Q7Z6L0 340 aaPredicted RBP23.29■■□□□ 1.32
LSM4-203ENST00000593829 SLC4A3P48751 1232 aa23.28■■□□□ 1.32
LSM4-203ENST00000593829 PDE4BQ07343 736 aa23.28■■□□□ 1.32
LSM4-203ENST00000593829 TMEM179Q6ZVK1 233 aa23.28■■□□□ 1.32
LSM4-203ENST00000593829 FASTKD5Q7L8L6 764 aaKnown RBP23.28■■□□□ 1.32
LSM4-203ENST00000593829 DSCC1Q9BVC3 393 aa23.28■■□□□ 1.32
LSM4-203ENST00000593829 ANAPC4Q9UJX5 808 aa23.28■■□□□ 1.32
LSM4-203ENST00000593829 AKR1B1P15121 316 aa23.27■■□□□ 1.32
LSM4-203ENST00000593829 CTCFP49711 727 aaPredicted RBP23.27■■□□□ 1.32
LSM4-203ENST00000593829 SGSM2O43147 1006 aa23.27■■□□□ 1.32
LSM4-203ENST00000593829 GUCY1A2P33402 732 aa23.27■■□□□ 1.32
LSM4-203ENST00000593829 SEPT2Q15019 361 aa23.27■■□□□ 1.32
LSM4-203ENST00000593829 BTBD19C9JJ37 291 aa23.26■■□□□ 1.31
LSM4-203ENST00000593829 RASA1P20936 1047 aa23.26■■□□□ 1.31
LSM4-203ENST00000593829 CTDSPL2Q05D32 466 aa23.26■■□□□ 1.31
LSM4-203ENST00000593829 MOGSQ13724 837 aa23.26■■□□□ 1.31
LSM4-203ENST00000593829 TSKSQ9UJT2 592 aa23.26■■□□□ 1.31
LSM4-203ENST00000593829 MYH8P13535 1937 aa23.26■■□□□ 1.31
LSM4-203ENST00000593829 USP17L10C9JJH3 530 aa23.25■■□□□ 1.31
LSM4-203ENST00000593829 BACE1P56817 501 aa23.25■■□□□ 1.31
LSM4-203ENST00000593829 ANKRD23Q86SG2 305 aa23.25■■□□□ 1.31
LSM4-203ENST00000593829 ZNF444Q8N0Y2 327 aaPredicted RBP23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms