RNA–Protein interactions for RNA: ENST00000593111.1

PSME3-216, Transcript of proteasome activator subunit 3, humanhuman

TSL 4

Gene PSME3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME3-216ENST00000593111 CYP2E1P05181 493 aaPredicted RBP21.41■■□□□ 1.02
PSME3-216ENST00000593111 HOXA7P31268 230 aaPredicted RBP21.41■■□□□ 1.02
PSME3-216ENST00000593111 ADGRA1Q86SQ6 560 aa21.41■■□□□ 1.02
PSME3-216ENST00000593111 CCAR1Q8IX12 1150 aaKnown RBP21.41■■□□□ 1.02
PSME3-216ENST00000593111 NBPF3Q9H094 633 aa21.41■■□□□ 1.02
PSME3-216ENST00000593111 FLT1P17948 1338 aa21.4■■□□□ 1.02
PSME3-216ENST00000593111 USP17L10C9JJH3 530 aa21.4■■□□□ 1.02
PSME3-216ENST00000593111 SURF6O75683 361 aaKnown RBP21.4■■□□□ 1.02
PSME3-216ENST00000593111 HERVK_113P62684 666 aa21.4■■□□□ 1.02
PSME3-216ENST00000593111 SHROOM1Q2M3G4 852 aaPredicted RBP21.4■■□□□ 1.02
PSME3-216ENST00000593111 TMEM57Q8N5G2 664 aa21.4■■□□□ 1.02
PSME3-216ENST00000593111 TRIB2Q92519 343 aa21.4■■□□□ 1.02
PSME3-216ENST00000593111 NUDT12Q9BQG2 462 aa21.4■■□□□ 1.02
PSME3-216ENST00000593111 ZAP70P43403 619 aa21.39■■□□□ 1.01
PSME3-216ENST00000593111 ATP8B2P98198 1209 aa21.39■■□□□ 1.01
PSME3-216ENST00000593111 POLA2Q14181 598 aa21.39■■□□□ 1.01
PSME3-216ENST00000593111 METTL16Q86W50 562 aaKnown RBP21.39■■□□□ 1.01
PSME3-216ENST00000593111 DNAJC18Q9H819 358 aa21.39■■□□□ 1.01
PSME3-216ENST00000593111 TXNRD2Q9NNW7 524 aa21.39■■□□□ 1.01
PSME3-216ENST00000593111 RBPJLQ9UBG7 517 aa21.39■■□□□ 1.01
PSME3-216ENST00000593111 ZMYND8Q9ULU4 1186 aaPredicted RBP21.39■■□□□ 1.01
PSME3-216ENST00000593111 CCER2I3L3R5 266 aa21.38■■□□□ 1.01
PSME3-216ENST00000593111 SOX1O00570 391 aaPredicted RBP21.38■■□□□ 1.01
PSME3-216ENST00000593111 HLA-DOAP06340 250 aa21.38■■□□□ 1.01
PSME3-216ENST00000593111 DYNLL1P63167 89 aaKnown RBP21.38■■□□□ 1.01
PSME3-216ENST00000593111 PDE3AQ14432 1141 aa21.38■■□□□ 1.01
PSME3-216ENST00000593111 ZKSCAN2Q63HK3 967 aa21.38■■□□□ 1.01
PSME3-216ENST00000593111 LRCH3Q96II8 777 aa21.38■■□□□ 1.01
PSME3-216ENST00000593111 PAGR1Q9BTK6 254 aa21.38■■□□□ 1.01
PSME3-216ENST00000593111 C11orf49Q9H6J7 331 aa21.38■■□□□ 1.01
PSME3-216ENST00000593111 GINM1Q9NU53 330 aa21.38■■□□□ 1.01
PSME3-216ENST00000593111 ZBTB21Q9ULJ3 1066 aa21.38■■□□□ 1.01
PSME3-216ENST00000593111 PRKAR2AP13861 404 aaKnown RBP21.37■■□□□ 1.01
PSME3-216ENST00000593111 CYP7A1P22680 504 aa21.37■■□□□ 1.01
PSME3-216ENST00000593111 MAPK4P31152 587 aa21.37■■□□□ 1.01
PSME3-216ENST00000593111 SSH3Q8TE77 659 aa21.37■■□□□ 1.01
PSME3-216ENST00000593111 SOCS4Q8WXH5 440 aa21.37■■□□□ 1.01
PSME3-216ENST00000593111 CWC22Q9HCG8 908 aaKnown RBP21.37■■□□□ 1.01
PSME3-216ENST00000593111 PIH1D3Q9NQM4 214 aaKnown RBP21.37■■□□□ 1.01
PSME3-216ENST00000593111 XRCC5P13010 732 aaKnown RBP21.36■■□□□ 1.01
PSME3-216ENST00000593111 SYN1P17600 705 aa21.36■■□□□ 1.01
PSME3-216ENST00000593111 Q3C1V9 767 aa21.36■■□□□ 1.01
PSME3-216ENST00000593111 USP17L2Q6R6M4 530 aa21.36■■□□□ 1.01
PSME3-216ENST00000593111 TRMT44Q8IYL2 757 aaKnown RBP21.36■■□□□ 1.01
PSME3-216ENST00000593111 SLC17A8Q8NDX2 589 aa21.36■■□□□ 1.01
PSME3-216ENST00000593111 ZNF512BQ96KM6 892 aaPredicted RBP21.36■■□□□ 1.01
PSME3-216ENST00000593111 C1orf115Q9H7X2 142 aa21.36■■□□□ 1.01
PSME3-216ENST00000593111 EMILIN3Q9NT22 766 aa21.36■■□□□ 1.01
PSME3-216ENST00000593111 OGDHLQ9ULD0 1010 aa21.36■■□□□ 1.01
PSME3-216ENST00000593111 SIPA1L1O43166 1804 aa21.36■■□□□ 1.01
PSME3-216ENST00000593111 ALPK3Q96L96 1907 aa21.35■■□□□ 1.01
PSME3-216ENST00000593111 IDH1O75874 414 aaKnown RBP21.35■■□□□ 1.01
PSME3-216ENST00000593111 ZKSCAN1P17029 563 aaPredicted RBP21.35■■□□□ 1.01
PSME3-216ENST00000593111 USP5P45974 858 aa21.35■■□□□ 1.01
PSME3-216ENST00000593111 MNX1P50219 401 aaPredicted RBP21.35■■□□□ 1.01
PSME3-216ENST00000593111 ERVK-9P63128 1117 aa21.35■■□□□ 1.01
PSME3-216ENST00000593111 ERVK-24P63145 666 aa21.35■■□□□ 1.01
PSME3-216ENST00000593111 MAP3K21Q5TCX8 1036 aa21.35■■□□□ 1.01
PSME3-216ENST00000593111 GDF15Q99988 308 aa21.35■■□□□ 1.01
PSME3-216ENST00000593111 CCDC8Q9H0W5 538 aaPredicted RBP21.35■■□□□ 1.01
PSME3-216ENST00000593111 PLXNB2O15031 1838 aa21.34■■□□□ 1.01
PSME3-216ENST00000593111 GH2P01242 217 aa21.34■■□□□ 1.01
PSME3-216ENST00000593111 BMP8BP34820 402 aa21.34■■□□□ 1.01
PSME3-216ENST00000593111 CACNB2Q08289 660 aaPredicted RBP21.34■■□□□ 1.01
PSME3-216ENST00000593111 ZYXQ15942 572 aaKnown RBP21.34■■□□□ 1.01
PSME3-216ENST00000593111 MIGA1Q8NAN2 632 aa21.34■■□□□ 1.01
PSME3-216ENST00000593111 PORCNQ9H237 461 aa21.34■■□□□ 1.01
PSME3-216ENST00000593111 IGSF3O75054 1194 aa21.33■■□□□ 1.01
PSME3-216ENST00000593111 RGS2P41220 211 aa21.33■■□□□ 1.01
PSME3-216ENST00000593111 GPR142Q7Z601 462 aa21.33■■□□□ 1.01
PSME3-216ENST00000593111 PLEKHH3Q7Z736 793 aa21.33■■□□□ 1.01
PSME3-216ENST00000593111 GTF3C2Q8WUA4 911 aaPredicted RBP21.33■■□□□ 1.01
PSME3-216ENST00000593111 FEZ1Q99689 392 aa21.33■■□□□ 1.01
PSME3-216ENST00000593111 DBNLQ9UJU6 430 aaKnown RBP21.33■■□□□ 1.01
PSME3-216ENST00000593111 MAST2Q6P0Q8 1798 aa21.33■■□□□ 1
PSME3-216ENST00000593111 CDK5RAP2Q96SN8 1893 aa21.32■■□□□ 1
PSME3-216ENST00000593111 MYO5AQ9Y4I1 1855 aaKnown RBP21.32■■□□□ 1
PSME3-216ENST00000593111 CCL14Q16627 93 aa21.32■■□□□ 1
PSME3-216ENST00000593111 MAGEB6Q8N7X4 407 aa21.32■■□□□ 1
PSME3-216ENST00000593111 USP6NLQ92738 828 aa21.32■■□□□ 1
PSME3-216ENST00000593111 TLR7Q9NYK1 1049 aaKnown RBP21.32■■□□□ 1
PSME3-216ENST00000593111 USP17L15C9J2P7 530 aa21.31■■□□□ 1
PSME3-216ENST00000593111 USP17L13C9JLJ4 530 aa21.31■■□□□ 1
PSME3-216ENST00000593111 USP17L11C9JVI0 530 aa21.31■■□□□ 1
PSME3-216ENST00000593111 USP17L18D6R9N7 530 aa21.31■■□□□ 1
PSME3-216ENST00000593111 USP17L22D6RA61 530 aa21.31■■□□□ 1
PSME3-216ENST00000593111 USP17L17D6RBQ6 530 aa21.31■■□□□ 1
PSME3-216ENST00000593111 USP17L19D6RCP7 530 aa21.31■■□□□ 1
PSME3-216ENST00000593111 USP17L20D6RJB6 530 aa21.31■■□□□ 1
PSME3-216ENST00000593111 CCND3P30281 292 aaPredicted RBP21.31■■□□□ 1
PSME3-216ENST00000593111 USP17L24Q0WX57 530 aa21.31■■□□□ 1
PSME3-216ENST00000593111 RAB3GAP1Q15042 981 aa21.31■■□□□ 1
PSME3-216ENST00000593111 MORN1Q5T089 497 aa21.31■■□□□ 1
PSME3-216ENST00000593111 WDR78Q5VTH9 848 aa21.31■■□□□ 1
PSME3-216ENST00000593111 FTSJ3Q8IY81 847 aaKnown RBP21.31■■□□□ 1
PSME3-216ENST00000593111 EAF2Q96CJ1 260 aaPredicted RBP21.31■■□□□ 1
PSME3-216ENST00000593111 NOP58Q9Y2X3 529 aaKnown RBP21.31■■□□□ 1
PSME3-216ENST00000593111 NDUFB9Q9Y6M9 179 aa21.31■■□□□ 1
PSME3-216ENST00000593111 DDX60LQ5H9U9 1706 aaKnown RBP21.31■■□□□ 1
PSME3-216ENST00000593111 FOCADQ5VW36 1801 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms