RNA–Protein interactions for RNA: ENST00000592488.2

AP3D1-212, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 3

Gene AP3D1, Length 707 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-212ENST00000592488 SH3D19Q5HYK7 790 aa20.36■□□□□ 0.85
AP3D1-212ENST00000592488 ZSCAN25Q6NSZ9 544 aa20.36■□□□□ 0.85
AP3D1-212ENST00000592488 TATDN1Q6P1N9 297 aa20.36■□□□□ 0.85
AP3D1-212ENST00000592488 SMCR8Q8TEV9 937 aaPredicted RBP20.36■□□□□ 0.85
AP3D1-212ENST00000592488 ARMT1Q9H993 441 aa20.36■□□□□ 0.85
AP3D1-212ENST00000592488 MCM9Q9NXL9 1143 aa20.36■□□□□ 0.85
AP3D1-212ENST00000592488 PNMA3Q9UL41 463 aa20.36■□□□□ 0.85
AP3D1-212ENST00000592488 PTCH2Q9Y6C5 1203 aa20.36■□□□□ 0.85
AP3D1-212ENST00000592488 PSMC4P43686 418 aa20.35■□□□□ 0.85
AP3D1-212ENST00000592488 PABPC4Q13310 644 aaKnown RBP eCLIP20.35■□□□□ 0.85
AP3D1-212ENST00000592488 MTMR2Q13614 643 aa20.35■□□□□ 0.85
AP3D1-212ENST00000592488 SHROOM1Q2M3G4 852 aaPredicted RBP20.35■□□□□ 0.85
AP3D1-212ENST00000592488 SDR42E1Q8WUS8 393 aa20.35■□□□□ 0.85
AP3D1-212ENST00000592488 ARMC5Q96C12 935 aa20.35■□□□□ 0.85
AP3D1-212ENST00000592488 DCP1AQ9NPI6 582 aaPredicted RBP20.35■□□□□ 0.85
AP3D1-212ENST00000592488 ECM2O94769 699 aaPredicted RBP20.34■□□□□ 0.85
AP3D1-212ENST00000592488 GH2P01242 217 aa20.34■□□□□ 0.85
AP3D1-212ENST00000592488 PLCD1P51178 756 aa20.34■□□□□ 0.85
AP3D1-212ENST00000592488 PRMT2P55345 433 aa20.34■□□□□ 0.85
AP3D1-212ENST00000592488 BACE1P56817 501 aa20.34■□□□□ 0.85
AP3D1-212ENST00000592488 SLFNL1Q499Z3 407 aa20.34■□□□□ 0.85
AP3D1-212ENST00000592488 TSHZ3Q63HK5 1081 aa20.34■□□□□ 0.85
AP3D1-212ENST00000592488 TRIM47Q96LD4 638 aa20.34■□□□□ 0.85
AP3D1-212ENST00000592488 FMNL1O95466 1100 aaPredicted RBP20.33■□□□□ 0.85
AP3D1-212ENST00000592488 CTGFP29279 349 aa20.33■□□□□ 0.85
AP3D1-212ENST00000592488 SLC9C1Q4G0N8 1177 aa20.33■□□□□ 0.85
AP3D1-212ENST00000592488 ATP8A2Q9NTI2 1148 aa20.33■□□□□ 0.85
AP3D1-212ENST00000592488 TMOD4Q9NZQ9 345 aa20.33■□□□□ 0.85
AP3D1-212ENST00000592488 KIAA0100Q14667 2235 aaKnown RBP20.33■□□□□ 0.84
AP3D1-212ENST00000592488 TTC41PQ6P2S7 1318 aa20.32■□□□□ 0.84
AP3D1-212ENST00000592488 BRCA2P51587 3418 aa20.32■□□□□ 0.84
AP3D1-212ENST00000592488 C19orf81C9J6K1 198 aa20.32■□□□□ 0.84
AP3D1-212ENST00000592488 USP17L10C9JJH3 530 aa20.32■□□□□ 0.84
AP3D1-212ENST00000592488 CHGBP05060 677 aa20.32■□□□□ 0.84
AP3D1-212ENST00000592488 HOXD10P28358 340 aa20.32■□□□□ 0.84
AP3D1-212ENST00000592488 SHMT1P34896 483 aa20.32■□□□□ 0.84
AP3D1-212ENST00000592488 CERKLQ49MI3 558 aaPredicted RBP20.32■□□□□ 0.84
AP3D1-212ENST00000592488 KBTBD3Q8NAB2 608 aa20.32■□□□□ 0.84
AP3D1-212ENST00000592488 SRRDQ9UH36 339 aa20.32■□□□□ 0.84
AP3D1-212ENST00000592488 PDE4DIPQ5VU43 2346 aa20.32■□□□□ 0.84
AP3D1-212ENST00000592488 PRKAB2O43741 272 aa20.31■□□□□ 0.84
AP3D1-212ENST00000592488 OSBPP22059 807 aa20.31■□□□□ 0.84
AP3D1-212ENST00000592488 FCGRTP55899 365 aa20.31■□□□□ 0.84
AP3D1-212ENST00000592488 GABPAQ06546 454 aa20.31■□□□□ 0.84
AP3D1-212ENST00000592488 AAMPQ13685 434 aa20.31■□□□□ 0.84
AP3D1-212ENST00000592488 ABCB5Q2M3G0 1257 aa20.31■□□□□ 0.84
AP3D1-212ENST00000592488 NBPF11Q86T75 865 aa20.31■□□□□ 0.84
AP3D1-212ENST00000592488 ERC2O15083 957 aa20.3■□□□□ 0.84
AP3D1-212ENST00000592488 DDRGK1Q96HY6 314 aa20.3■□□□□ 0.84
AP3D1-212ENST00000592488 ZNF333Q96JL9 665 aa20.3■□□□□ 0.84
AP3D1-212ENST00000592488 PUS7LQ9H0K6 701 aaKnown RBP20.3■□□□□ 0.84
AP3D1-212ENST00000592488 ASCC2Q9H1I8 757 aaPredicted RBP20.3■□□□□ 0.84
AP3D1-212ENST00000592488 CABP5Q9NP86 173 aa20.3■□□□□ 0.84
AP3D1-212ENST00000592488 ZBTB47Q9UFB7 747 aaPredicted RBP20.3■□□□□ 0.84
AP3D1-212ENST00000592488 TAOK2Q9UL54 1235 aa20.3■□□□□ 0.84
AP3D1-212ENST00000592488 MYPNQ86TC9 1320 aa20.29■□□□□ 0.84
AP3D1-212ENST00000592488 MGAMO43451 1857 aa20.29■□□□□ 0.84
AP3D1-212ENST00000592488 CYP2D6P10635 497 aa20.29■□□□□ 0.84
AP3D1-212ENST00000592488 GCLCP48506 637 aaPredicted RBP20.29■□□□□ 0.84
AP3D1-212ENST00000592488 IRX3P78415 501 aaPredicted RBP20.29■□□□□ 0.84
AP3D1-212ENST00000592488 EVX2Q03828 476 aa20.29■□□□□ 0.84
AP3D1-212ENST00000592488 HDAC1Q13547 482 aaPredicted RBP20.29■□□□□ 0.84
AP3D1-212ENST00000592488 RAB3GAP1Q15042 981 aa20.29■□□□□ 0.84
AP3D1-212ENST00000592488 FAM110CQ1W6H9 321 aa20.29■□□□□ 0.84
AP3D1-212ENST00000592488 AMOTL1Q8IY63 956 aa20.29■□□□□ 0.84
AP3D1-212ENST00000592488 ANKRD13CQ8N6S4 541 aa20.29■□□□□ 0.84
AP3D1-212ENST00000592488 OTUD7AQ8TE49 926 aaPredicted RBP20.29■□□□□ 0.84
AP3D1-212ENST00000592488 GCC1Q96CN9 775 aa20.29■□□□□ 0.84
AP3D1-212ENST00000592488 FEZ1Q99689 392 aa20.29■□□□□ 0.84
AP3D1-212ENST00000592488 SLC4A4Q9Y6R1 1079 aa20.29■□□□□ 0.84
AP3D1-212ENST00000592488 BAZ2AQ9UIF9 1905 aaKnown RBP20.29■□□□□ 0.84
AP3D1-212ENST00000592488 GLRX3O76003 335 aaKnown RBP20.28■□□□□ 0.84
AP3D1-212ENST00000592488 ZFYP08048 801 aaPredicted RBP20.28■□□□□ 0.84
AP3D1-212ENST00000592488 MX1P20591 662 aa20.28■□□□□ 0.84
AP3D1-212ENST00000592488 HOXA7P31268 230 aaPredicted RBP20.28■□□□□ 0.84
AP3D1-212ENST00000592488 USP17L2Q6R6M4 530 aa20.28■□□□□ 0.84
AP3D1-212ENST00000592488 PI4K2BQ8TCG2 481 aa20.28■□□□□ 0.84
AP3D1-212ENST00000592488 SWAP70Q9UH65 585 aa20.28■□□□□ 0.84
AP3D1-212ENST00000592488 RBBP6Q7Z6E9 1792 aaKnown RBP20.28■□□□□ 0.84
AP3D1-212ENST00000592488 RNF113AO15541 343 aaKnown RBP20.27■□□□□ 0.84
AP3D1-212ENST00000592488 PRKCZQ05513 592 aa20.27■□□□□ 0.84
AP3D1-212ENST00000592488 LRRFIP1Q32MZ4 808 aaKnown RBP20.27■□□□□ 0.84
AP3D1-212ENST00000592488 RAET1EQ8TD07 263 aa20.27■□□□□ 0.84
AP3D1-212ENST00000592488 SH3TC2Q8TF17 1288 aa20.27■□□□□ 0.84
AP3D1-212ENST00000592488 EMILIN3Q9NT22 766 aa20.27■□□□□ 0.84
AP3D1-212ENST00000592488 TNPO2O14787 897 aaKnown RBP20.26■□□□□ 0.83
AP3D1-212ENST00000592488 USP14P54578 494 aa20.26■□□□□ 0.83
AP3D1-212ENST00000592488 ANKRD45Q5TZF3 282 aa20.26■□□□□ 0.83
AP3D1-212ENST00000592488 C12orf60Q5U649 245 aa20.26■□□□□ 0.83
AP3D1-212ENST00000592488 SLC44A5Q8NCS7 719 aa20.26■□□□□ 0.83
AP3D1-212ENST00000592488 APPBP2Q92624 585 aa20.26■□□□□ 0.83
AP3D1-212ENST00000592488 DYNLL2Q96FJ2 89 aa20.26■□□□□ 0.83
AP3D1-212ENST00000592488 C12orf42Q96LP6 360 aa20.26■□□□□ 0.83
AP3D1-212ENST00000592488 TMEM106CQ9BVX2 250 aa20.26■□□□□ 0.83
AP3D1-212ENST00000592488 MYH8P13535 1937 aa20.25■□□□□ 0.83
AP3D1-212ENST00000592488 MKI67P46013 3256 aaKnown RBP20.25■□□□□ 0.83
AP3D1-212ENST00000592488 POTEFA5A3E0 1075 aa20.25■□□□□ 0.83
AP3D1-212ENST00000592488 USP17L12C9JPN9 530 aa20.25■□□□□ 0.83
AP3D1-212ENST00000592488 USP17L21D6R901 530 aa20.25■□□□□ 0.83
AP3D1-212ENST00000592488 MPHOSPH10O00566 681 aaKnown RBP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms