RNA–Protein interactions for RNA: ENST00000592445.1

PRKCSH-216, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-216ENST00000592445 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.17■■□□□ 1.46
PRKCSH-216ENST00000592445 PLXNB2O15031 1838 aa24.17■■□□□ 1.46
PRKCSH-216ENST00000592445 C19orf81C9J6K1 198 aa24.16■■□□□ 1.46
PRKCSH-216ENST00000592445 BAG3O95817 575 aa24.16■■□□□ 1.46
PRKCSH-216ENST00000592445 CRACR2BQ8N4Y2 399 aaPredicted RBP24.16■■□□□ 1.46
PRKCSH-216ENST00000592445 CWC22Q9HCG8 908 aaKnown RBP24.16■■□□□ 1.46
PRKCSH-216ENST00000592445 USP17L10C9JJH3 530 aa24.15■■□□□ 1.46
PRKCSH-216ENST00000592445 GNAI3P08754 354 aa24.15■■□□□ 1.46
PRKCSH-216ENST00000592445 ARID4AP29374 1257 aaPredicted RBP24.15■■□□□ 1.46
PRKCSH-216ENST00000592445 RGS2P41220 211 aa24.15■■□□□ 1.46
PRKCSH-216ENST00000592445 PAGR1Q9BTK6 254 aa24.15■■□□□ 1.46
PRKCSH-216ENST00000592445 AATFQ9NY61 560 aaKnown RBP eCLIP24.15■■□□□ 1.46
PRKCSH-216ENST00000592445 RBPJLQ9UBG7 517 aa24.15■■□□□ 1.46
PRKCSH-216ENST00000592445 COL6A1P12109 1028 aa24.14■■□□□ 1.45
PRKCSH-216ENST00000592445 PLCG2P16885 1265 aa24.14■■□□□ 1.45
PRKCSH-216ENST00000592445 CCND3P30281 292 aaPredicted RBP24.14■■□□□ 1.45
PRKCSH-216ENST00000592445 MCAMP43121 646 aa24.14■■□□□ 1.45
PRKCSH-216ENST00000592445 ERVK-9P63128 1117 aa24.14■■□□□ 1.45
PRKCSH-216ENST00000592445 ERVK-24P63145 666 aa24.14■■□□□ 1.45
PRKCSH-216ENST00000592445 MDM2Q00987 491 aaPredicted RBP24.14■■□□□ 1.45
PRKCSH-216ENST00000592445 LRRC26Q2I0M4 334 aa24.14■■□□□ 1.45
PRKCSH-216ENST00000592445 NAA16Q6N069 864 aaPredicted RBP24.14■■□□□ 1.45
PRKCSH-216ENST00000592445 TGFBRAP1Q8WUH2 860 aa24.14■■□□□ 1.45
PRKCSH-216ENST00000592445 UNC80Q8N2C7 3258 aa24.14■■□□□ 1.45
PRKCSH-216ENST00000592445 GDF11O95390 407 aa24.13■■□□□ 1.45
PRKCSH-216ENST00000592445 UQCRFS1P1P0C7P4 283 aa24.13■■□□□ 1.45
PRKCSH-216ENST00000592445 JAG1P78504 1218 aa24.13■■□□□ 1.45
PRKCSH-216ENST00000592445 MTX1Q13505 466 aa24.13■■□□□ 1.45
PRKCSH-216ENST00000592445 CCL14Q16627 93 aa24.13■■□□□ 1.45
PRKCSH-216ENST00000592445 Q3C1V9 767 aa24.13■■□□□ 1.45
PRKCSH-216ENST00000592445 GPR142Q7Z601 462 aa24.13■■□□□ 1.45
PRKCSH-216ENST00000592445 PLEKHH3Q7Z736 793 aa24.13■■□□□ 1.45
PRKCSH-216ENST00000592445 FOXP4Q8IVH2 680 aaPredicted RBP24.13■■□□□ 1.45
PRKCSH-216ENST00000592445 MAPKAPK5Q8IW41 473 aa24.13■■□□□ 1.45
PRKCSH-216ENST00000592445 GTF3C2Q8WUA4 911 aaPredicted RBP24.13■■□□□ 1.45
PRKCSH-216ENST00000592445 PORCNQ9H237 461 aa24.13■■□□□ 1.45
PRKCSH-216ENST00000592445 CT47B1P0C2W7 299 aaPredicted RBP24.12■■□□□ 1.45
PRKCSH-216ENST00000592445 LHX8Q68G74 356 aa24.12■■□□□ 1.45
PRKCSH-216ENST00000592445 USP6NLQ92738 828 aa24.12■■□□□ 1.45
PRKCSH-216ENST00000592445 APBA2Q99767 749 aa24.12■■□□□ 1.45
PRKCSH-216ENST00000592445 GINM1Q9NU53 330 aa24.12■■□□□ 1.45
PRKCSH-216ENST00000592445 ZNF316A6NFI3 1004 aaPredicted RBP24.11■■□□□ 1.45
PRKCSH-216ENST00000592445 G3BP1Q13283 466 aaKnown RBP eCLIP24.11■■□□□ 1.45
PRKCSH-216ENST00000592445 SHROOM1Q2M3G4 852 aaPredicted RBP24.11■■□□□ 1.45
PRKCSH-216ENST00000592445 MORN1Q5T089 497 aa24.11■■□□□ 1.45
PRKCSH-216ENST00000592445 DNAJC18Q9H819 358 aa24.11■■□□□ 1.45
PRKCSH-216ENST00000592445 ZBTB21Q9ULJ3 1066 aa24.11■■□□□ 1.45
PRKCSH-216ENST00000592445 FLT1P17948 1338 aa24.1■■□□□ 1.45
PRKCSH-216ENST00000592445 LBHD1Q9BQE6 289 aaPredicted RBP24.1■■□□□ 1.45
PRKCSH-216ENST00000592445 SNRKQ9NRH2 765 aa24.1■■□□□ 1.45
PRKCSH-216ENST00000592445 PALD1Q9ULE6 856 aa24.1■■□□□ 1.45
PRKCSH-216ENST00000592445 USP17L2Q6R6M4 530 aa24.09■■□□□ 1.45
PRKCSH-216ENST00000592445 METTL16Q86W50 562 aaKnown RBP24.09■■□□□ 1.45
PRKCSH-216ENST00000592445 EMILIN3Q9NT22 766 aa24.09■■□□□ 1.45
PRKCSH-216ENST00000592445 DNAH12Q6ZR08 3092 aa24.09■■□□□ 1.45
PRKCSH-216ENST00000592445 GLRX3O76003 335 aaKnown RBP24.08■■□□□ 1.45
PRKCSH-216ENST00000592445 HLA-DOAP06340 250 aa24.08■■□□□ 1.45
PRKCSH-216ENST00000592445 PPP4CP60510 307 aa24.08■■□□□ 1.45
PRKCSH-216ENST00000592445 TTC39AQ5SRH9 613 aa24.08■■□□□ 1.45
PRKCSH-216ENST00000592445 ATF7IPQ6VMQ6 1270 aa24.08■■□□□ 1.45
PRKCSH-216ENST00000592445 TRMT2AQ8IZ69 625 aaKnown RBP24.08■■□□□ 1.45
PRKCSH-216ENST00000592445 EDC3Q96F86 508 aaKnown RBP24.08■■□□□ 1.45
PRKCSH-216ENST00000592445 SENP6Q9GZR1 1112 aaPredicted RBP24.08■■□□□ 1.45
PRKCSH-216ENST00000592445 SAP30BPQ9UHR5 308 aaKnown RBP24.08■■□□□ 1.45
PRKCSH-216ENST00000592445 LAMA2P24043 3122 aaKnown RBP24.08■■□□□ 1.44
PRKCSH-216ENST00000592445 SIPA1L1O43166 1804 aa24.07■■□□□ 1.44
PRKCSH-216ENST00000592445 CCNA1P78396 465 aa24.07■■□□□ 1.44
PRKCSH-216ENST00000592445 MAP2K5Q13163 448 aa24.07■■□□□ 1.44
PRKCSH-216ENST00000592445 WDR78Q5VTH9 848 aa24.07■■□□□ 1.44
PRKCSH-216ENST00000592445 MFSD14CQ5VZR4 134 aa24.07■■□□□ 1.44
PRKCSH-216ENST00000592445 ADGRA1Q86SQ6 560 aa24.06■■□□□ 1.44
PRKCSH-216ENST00000592445 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.06■■□□□ 1.44
PRKCSH-216ENST00000592445 ARHGAP45Q92619 1136 aa24.06■■□□□ 1.44
PRKCSH-216ENST00000592445 FEZ1Q99689 392 aa24.06■■□□□ 1.44
PRKCSH-216ENST00000592445 COL25A1Q9BXS0 654 aaPredicted RBP24.06■■□□□ 1.44
PRKCSH-216ENST00000592445 RABGAP1Q9Y3P9 1069 aa24.06■■□□□ 1.44
PRKCSH-216ENST00000592445 NDUFB9Q9Y6M9 179 aa24.06■■□□□ 1.44
PRKCSH-216ENST00000592445 GH2P01242 217 aa24.05■■□□□ 1.44
PRKCSH-216ENST00000592445 GNAI2P04899 355 aa24.05■■□□□ 1.44
PRKCSH-216ENST00000592445 ZYXQ15942 572 aaKnown RBP24.05■■□□□ 1.44
PRKCSH-216ENST00000592445 CCDC158Q5M9N0 1113 aa24.05■■□□□ 1.44
PRKCSH-216ENST00000592445 POTEEQ6S8J3 1075 aa24.05■■□□□ 1.44
PRKCSH-216ENST00000592445 FAM161BQ96MY7 647 aa24.05■■□□□ 1.44
PRKCSH-216ENST00000592445 USP17L15C9J2P7 530 aa24.04■■□□□ 1.44
PRKCSH-216ENST00000592445 USP17L13C9JLJ4 530 aa24.04■■□□□ 1.44
PRKCSH-216ENST00000592445 USP17L11C9JVI0 530 aa24.04■■□□□ 1.44
PRKCSH-216ENST00000592445 USP17L18D6R9N7 530 aa24.04■■□□□ 1.44
PRKCSH-216ENST00000592445 USP17L22D6RA61 530 aa24.04■■□□□ 1.44
PRKCSH-216ENST00000592445 USP17L17D6RBQ6 530 aa24.04■■□□□ 1.44
PRKCSH-216ENST00000592445 USP17L19D6RCP7 530 aa24.04■■□□□ 1.44
PRKCSH-216ENST00000592445 USP17L20D6RJB6 530 aa24.04■■□□□ 1.44
PRKCSH-216ENST00000592445 POTEB2H3BUK9 544 aa24.04■■□□□ 1.44
PRKCSH-216ENST00000592445 CNGA1P29973 690 aa24.04■■□□□ 1.44
PRKCSH-216ENST00000592445 USP17L24Q0WX57 530 aa24.04■■□□□ 1.44
PRKCSH-216ENST00000592445 FAM109BQ6ICB4 259 aaPredicted RBP24.04■■□□□ 1.44
PRKCSH-216ENST00000592445 PRKAG2Q9UGJ0 569 aa24.04■■□□□ 1.44
PRKCSH-216ENST00000592445 PNMA6EA0A0J9YXQ4 647 aa24.03■■□□□ 1.44
PRKCSH-216ENST00000592445 RARSP54136 660 aaKnown RBP24.03■■□□□ 1.44
PRKCSH-216ENST00000592445 ATN1P54259 1190 aaPredicted RBP24.03■■□□□ 1.44
PRKCSH-216ENST00000592445 ATP2B2Q01814 1243 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms