RNA–Protein interactions for RNA: ENST00000592444.5

ERCC1-216, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-216ENST00000592444 PLXNA3P51805 1871 aa6.68□□□□□ -1.34
ERCC1-216ENST00000592444 PRRC2BQ5JSZ5 2229 aaKnown RBP6.68□□□□□ -1.34
ERCC1-216ENST00000592444 PRR23AA6NEV1 266 aa6.68□□□□□ -1.34
ERCC1-216ENST00000592444 OATP04181 439 aa6.68□□□□□ -1.34
ERCC1-216ENST00000592444 DLGAP5Q15398 846 aa6.68□□□□□ -1.34
ERCC1-216ENST00000592444 MTHFSDQ2M296 383 aaKnown RBP6.68□□□□□ -1.34
ERCC1-216ENST00000592444 KIF6Q6ZMV9 814 aa6.68□□□□□ -1.34
ERCC1-216ENST00000592444 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.68□□□□□ -1.34
ERCC1-216ENST00000592444 PARK7Q99497 189 aaKnown RBP6.68□□□□□ -1.34
ERCC1-216ENST00000592444 NKX2-4Q9H2Z4 354 aa6.68□□□□□ -1.34
ERCC1-216ENST00000592444 PDLIM7Q9NR12 457 aa6.68□□□□□ -1.34
ERCC1-216ENST00000592444 PCDHAC2Q9Y5I4 1007 aa6.68□□□□□ -1.34
ERCC1-216ENST00000592444 SNCAIPQ9Y6H5 919 aa6.68□□□□□ -1.34
ERCC1-216ENST00000592444 CACNA1HO95180 2353 aa6.68□□□□□ -1.34
ERCC1-216ENST00000592444 MYO3BQ8WXR4 1341 aa6.68□□□□□ -1.34
ERCC1-216ENST00000592444 GCN1Q92616 2671 aaKnown RBP6.68□□□□□ -1.34
ERCC1-216ENST00000592444 A0A0G2JMZ2 1700 aa6.67□□□□□ -1.34
ERCC1-216ENST00000592444 PROB1E7EW31 1015 aa6.67□□□□□ -1.34
ERCC1-216ENST00000592444 SNRPA1P09661 255 aaKnown RBP6.67□□□□□ -1.34
ERCC1-216ENST00000592444 MMP14P50281 582 aa6.67□□□□□ -1.34
ERCC1-216ENST00000592444 PPIL2Q13356 520 aa6.67□□□□□ -1.34
ERCC1-216ENST00000592444 PARP10Q53GL7 1025 aa6.67□□□□□ -1.34
ERCC1-216ENST00000592444 MAP3K21Q5TCX8 1036 aa6.67□□□□□ -1.34
ERCC1-216ENST00000592444 L3MBTL2Q969R5 705 aa6.67□□□□□ -1.34
ERCC1-216ENST00000592444 EMID1Q96A84 441 aaPredicted RBP6.67□□□□□ -1.34
ERCC1-216ENST00000592444 CARD14Q9BXL6 1004 aa6.67□□□□□ -1.34
ERCC1-216ENST00000592444 SLC28A3Q9HAS3 691 aa6.67□□□□□ -1.34
ERCC1-216ENST00000592444 PODXL2Q9NZ53 605 aa6.67□□□□□ -1.34
ERCC1-216ENST00000592444 ANKIB1Q9P2G1 1089 aa6.67□□□□□ -1.34
ERCC1-216ENST00000592444 MSRAQ9UJ68 235 aa6.67□□□□□ -1.34
ERCC1-216ENST00000592444 GGA1Q9UJY5 639 aa6.67□□□□□ -1.34
ERCC1-216ENST00000592444 MTCH2Q9Y6C9 303 aa6.67□□□□□ -1.34
ERCC1-216ENST00000592444 COL4A1P02462 1669 aa6.67□□□□□ -1.34
ERCC1-216ENST00000592444 GVINP1Q7Z2Y8 2422 aa6.67□□□□□ -1.34
ERCC1-216ENST00000592444 BTBD11A6QL63 1104 aa6.66□□□□□ -1.34
ERCC1-216ENST00000592444 NR1I2O75469 434 aa6.66□□□□□ -1.34
ERCC1-216ENST00000592444 S1PR4O95977 384 aa6.66□□□□□ -1.34
ERCC1-216ENST00000592444 ADH1BP00325 375 aa6.66□□□□□ -1.34
ERCC1-216ENST00000592444 HIC1Q14526 733 aa6.66□□□□□ -1.34
ERCC1-216ENST00000592444 ADSSL1Q8N142 457 aa6.66□□□□□ -1.34
ERCC1-216ENST00000592444 IL17REQ8NFR9 667 aa6.66□□□□□ -1.34
ERCC1-216ENST00000592444 TRIB2Q92519 343 aa6.66□□□□□ -1.34
ERCC1-216ENST00000592444 ALG13Q9NP73 1137 aaKnown RBP6.66□□□□□ -1.34
ERCC1-216ENST00000592444 AOX1Q06278 1338 aa6.66□□□□□ -1.34
ERCC1-216ENST00000592444 NAV2Q8IVL1 2488 aa6.66□□□□□ -1.34
ERCC1-216ENST00000592444 H0Y858 1186 aa6.65□□□□□ -1.34
ERCC1-216ENST00000592444 RFXAPO00287 272 aa6.65□□□□□ -1.34
ERCC1-216ENST00000592444 MYO1BO43795 1136 aa6.65□□□□□ -1.34
ERCC1-216ENST00000592444 CCND3P30281 292 aaPredicted RBP6.65□□□□□ -1.34
ERCC1-216ENST00000592444 FPGSQ05932 587 aa6.65□□□□□ -1.34
ERCC1-216ENST00000592444 MOGSQ13724 837 aa6.65□□□□□ -1.34
ERCC1-216ENST00000592444 TRIM60Q495X7 471 aa6.65□□□□□ -1.34
ERCC1-216ENST00000592444 STRIP1Q5VSL9 837 aa6.65□□□□□ -1.34
ERCC1-216ENST00000592444 KRT40Q6A162 431 aa6.65□□□□□ -1.34
ERCC1-216ENST00000592444 GIGYF2Q6Y7W6 1299 aaKnown RBP6.65□□□□□ -1.34
ERCC1-216ENST00000592444 SLC39A5Q6ZMH5 540 aa6.65□□□□□ -1.34
ERCC1-216ENST00000592444 LIAT1Q6ZQX7 453 aa6.65□□□□□ -1.34
ERCC1-216ENST00000592444 LURAP1LQ8IV03 231 aa6.65□□□□□ -1.34
ERCC1-216ENST00000592444 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.65□□□□□ -1.341e-8■□□□□ 9.5
ERCC1-216ENST00000592444 CARD11Q9BXL7 1154 aa6.65□□□□□ -1.34
ERCC1-216ENST00000592444 IRF2BPLQ9H1B7 796 aa6.65□□□□□ -1.34
ERCC1-216ENST00000592444 TLR9Q9NR96 1032 aa6.65□□□□□ -1.34
ERCC1-216ENST00000592444 BSDC1Q9NW68 430 aaPredicted RBP6.65□□□□□ -1.34
ERCC1-216ENST00000592444 GDF9O60383 454 aa6.64□□□□□ -1.35
ERCC1-216ENST00000592444 CACNB2Q08289 660 aaPredicted RBP6.64□□□□□ -1.35
ERCC1-216ENST00000592444 RAB30Q15771 203 aa6.64□□□□□ -1.35
ERCC1-216ENST00000592444 GPAT2Q6NUI2 795 aa6.64□□□□□ -1.35
ERCC1-216ENST00000592444 METTL3Q86U44 580 aaKnown RBP6.64□□□□□ -1.35
ERCC1-216ENST00000592444 PRMT6Q96LA8 375 aaPredicted RBP6.64□□□□□ -1.35
ERCC1-216ENST00000592444 TEPSINQ96N21 525 aa6.64□□□□□ -1.35
ERCC1-216ENST00000592444 GJD2Q9UKL4 321 aa6.64□□□□□ -1.35
ERCC1-216ENST00000592444 YBX2Q9Y2T7 364 aaKnown RBP6.64□□□□□ -1.35
ERCC1-216ENST00000592444 RRP7AQ9Y3A4 280 aaKnown RBP6.64□□□□□ -1.35
ERCC1-216ENST00000592444 SIPA1L3O60292 1781 aaPredicted RBP6.64□□□□□ -1.35
ERCC1-216ENST00000592444 CYSRT1A8MQ03 144 aa6.63□□□□□ -1.35
ERCC1-216ENST00000592444 GAKO14976 1311 aa6.63□□□□□ -1.35
ERCC1-216ENST00000592444 ST8SIA5O15466 376 aa6.63□□□□□ -1.35
ERCC1-216ENST00000592444 HMOX1P09601 288 aa6.63□□□□□ -1.35
ERCC1-216ENST00000592444 IL9P15248 144 aa6.63□□□□□ -1.35
ERCC1-216ENST00000592444 RAG1P15918 1043 aa6.63□□□□□ -1.35
ERCC1-216ENST00000592444 POU3F3P20264 500 aaPredicted RBP6.63□□□□□ -1.35
ERCC1-216ENST00000592444 CYP2B6P20813 491 aa6.63□□□□□ -1.35
ERCC1-216ENST00000592444 RPS8P62241 208 aaKnown RBP6.63□□□□□ -1.35
ERCC1-216ENST00000592444 PPATQ06203 517 aa6.63□□□□□ -1.35
ERCC1-216ENST00000592444 PUM1Q14671 1186 aaKnown RBP eCLIP6.63□□□□□ -1.35
ERCC1-216ENST00000592444 CFAP100Q494V2 611 aa6.63□□□□□ -1.35
ERCC1-216ENST00000592444 TTLL5Q6EMB2 1281 aa6.63□□□□□ -1.35
ERCC1-216ENST00000592444 SMYD5Q6GMV2 418 aa6.63□□□□□ -1.35
ERCC1-216ENST00000592444 SUGP1Q8IWZ8 645 aaKnown RBP6.63□□□□□ -1.35
ERCC1-216ENST00000592444 PBXIP1Q96AQ6 731 aa6.63□□□□□ -1.35
ERCC1-216ENST00000592444 ZNF428Q96B54 188 aa6.63□□□□□ -1.35
ERCC1-216ENST00000592444 CHAMP1Q96JM3 812 aa6.63□□□□□ -1.35
ERCC1-216ENST00000592444 TESK2Q96S53 571 aa6.63□□□□□ -1.35
ERCC1-216ENST00000592444 WRNIP1Q96S55 665 aa6.63□□□□□ -1.35
ERCC1-216ENST00000592444 FSD1Q9BTV5 496 aa6.63□□□□□ -1.35
ERCC1-216ENST00000592444 AAASQ9NRG9 546 aa6.63□□□□□ -1.35
ERCC1-216ENST00000592444 TRMT112Q9UI30 125 aaKnown RBP6.63□□□□□ -1.35
ERCC1-216ENST00000592444 AK9Q5TCS8 1911 aa6.62□□□□□ -1.35
ERCC1-216ENST00000592444 ECM29Q5VYK3 1845 aa6.62□□□□□ -1.35
ERCC1-216ENST00000592444 SOBPA7XYQ1 873 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms