RNA–Protein interactions for RNA: ENST00000591547.5

RETREG3-211, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-211ENST00000591547 TEX11Q8IYF3 940 aa12.14□□□□□ -0.47
RETREG3-211ENST00000591547 GPRC5AQ8NFJ5 357 aa12.14□□□□□ -0.47
RETREG3-211ENST00000591547 NEUROD6Q96NK8 337 aa12.14□□□□□ -0.47
RETREG3-211ENST00000591547 SENP6Q9GZR1 1112 aaPredicted RBP12.14□□□□□ -0.47
RETREG3-211ENST00000591547 DNAJC18Q9H819 358 aa12.14□□□□□ -0.47
RETREG3-211ENST00000591547 FLRT1Q9NZU1 646 aa12.14□□□□□ -0.47
RETREG3-211ENST00000591547 RAI14Q9P0K7 980 aa12.14□□□□□ -0.47
RETREG3-211ENST00000591547 MYO5AQ9Y4I1 1855 aaKnown RBP12.14□□□□□ -0.47
RETREG3-211ENST00000591547 LTBP2Q14767 1821 aa12.14□□□□□ -0.47
RETREG3-211ENST00000591547 PRUNE2Q8WUY3 3088 aa12.13□□□□□ -0.47
RETREG3-211ENST00000591547 BACE1P56817 501 aa12.13□□□□□ -0.47
RETREG3-211ENST00000591547 MORN1Q5T089 497 aa12.13□□□□□ -0.47
RETREG3-211ENST00000591547 GPR142Q7Z601 462 aa12.13□□□□□ -0.47
RETREG3-211ENST00000591547 MAPKAPK5Q8IW41 473 aa12.13□□□□□ -0.47
RETREG3-211ENST00000591547 MEIS3Q99687 375 aa12.13□□□□□ -0.47
RETREG3-211ENST00000591547 WDR18Q9BV38 432 aa12.13□□□□□ -0.47
RETREG3-211ENST00000591547 AS3MTQ9HBK9 375 aa12.13□□□□□ -0.47
RETREG3-211ENST00000591547 COPRSQ9NQ92 184 aa12.13□□□□□ -0.47
RETREG3-211ENST00000591547 TMOD4Q9NZQ9 345 aa12.13□□□□□ -0.47
RETREG3-211ENST00000591547 FBXO3Q9UK99 471 aa12.13□□□□□ -0.47
RETREG3-211ENST00000591547 COL2A1P02458 1487 aaPredicted RBP12.13□□□□□ -0.47
RETREG3-211ENST00000591547 PDS5AQ29RF7 1337 aaKnown RBP12.12□□□□□ -0.47
RETREG3-211ENST00000591547 NPM3O75607 178 aaKnown RBP12.12□□□□□ -0.47
RETREG3-211ENST00000591547 CNMDO75829 334 aa12.12□□□□□ -0.47
RETREG3-211ENST00000591547 XRCC5P13010 732 aaKnown RBP12.12□□□□□ -0.47
RETREG3-211ENST00000591547 HOXA7P31268 230 aaPredicted RBP12.12□□□□□ -0.47
RETREG3-211ENST00000591547 ERVK-9P63128 1117 aa12.12□□□□□ -0.47
RETREG3-211ENST00000591547 ERVK-24P63145 666 aa12.12□□□□□ -0.47
RETREG3-211ENST00000591547 PLEKHH3Q7Z736 793 aa12.12□□□□□ -0.47
RETREG3-211ENST00000591547 SPATA5Q8NB90 893 aa12.12□□□□□ -0.47
RETREG3-211ENST00000591547 CDX2Q99626 313 aaPredicted RBP12.12□□□□□ -0.47
RETREG3-211ENST00000591547 EMILIN3Q9NT22 766 aa12.12□□□□□ -0.47
RETREG3-211ENST00000591547 SMC4Q9NTJ3 1288 aa12.12□□□□□ -0.47
RETREG3-211ENST00000591547 CDH23Q9H251 3354 aa12.12□□□□□ -0.47
RETREG3-211ENST00000591547 LDHCP07864 332 aa12.11□□□□□ -0.47
RETREG3-211ENST00000591547 RGS2P41220 211 aa12.11□□□□□ -0.47
RETREG3-211ENST00000591547 PDE3AQ14432 1141 aa12.11□□□□□ -0.47
RETREG3-211ENST00000591547 ZYXQ15942 572 aaKnown RBP12.11□□□□□ -0.47
RETREG3-211ENST00000591547 C9orf50Q5SZB4 431 aa12.11□□□□□ -0.47
RETREG3-211ENST00000591547 ADGRA1Q86SQ6 560 aa12.11□□□□□ -0.47
RETREG3-211ENST00000591547 SOCS4Q8WXH5 440 aa12.11□□□□□ -0.47
RETREG3-211ENST00000591547 TBC1D2Q9BYX2 928 aa12.11□□□□□ -0.47
RETREG3-211ENST00000591547 SNRKQ9NRH2 765 aa12.11□□□□□ -0.47
RETREG3-211ENST00000591547 AATFQ9NY61 560 aaKnown RBP eCLIP12.11□□□□□ -0.47
RETREG3-211ENST00000591547 SAP30BPQ9UHR5 308 aaKnown RBP12.11□□□□□ -0.47
RETREG3-211ENST00000591547 PALD1Q9ULE6 856 aa12.11□□□□□ -0.47
RETREG3-211ENST00000591547 NOB1Q9ULX3 412 aaKnown RBP12.11□□□□□ -0.47
RETREG3-211ENST00000591547 FOCADQ5VW36 1801 aa12.11□□□□□ -0.47
RETREG3-211ENST00000591547 USP17L10C9JJH3 530 aa12.1□□□□□ -0.47
RETREG3-211ENST00000591547 ZBTB22O15209 634 aa12.1□□□□□ -0.47
RETREG3-211ENST00000591547 CNGA1P29973 690 aa12.1□□□□□ -0.47
RETREG3-211ENST00000591547 MAPK4P31152 587 aa12.1□□□□□ -0.47
RETREG3-211ENST00000591547 MCAMP43121 646 aa12.1□□□□□ -0.47
RETREG3-211ENST00000591547 RTP1P59025 263 aa12.1□□□□□ -0.47
RETREG3-211ENST00000591547 GSTO1P78417 241 aa12.1□□□□□ -0.47
RETREG3-211ENST00000591547 MVPQ14764 893 aaKnown RBP12.1□□□□□ -0.47
RETREG3-211ENST00000591547 SHHQ15465 462 aa12.1□□□□□ -0.47
RETREG3-211ENST00000591547 ALDH1L2Q3SY69 923 aa12.1□□□□□ -0.47
RETREG3-211ENST00000591547 ANO1Q5XXA6 986 aa12.1□□□□□ -0.47
RETREG3-211ENST00000591547 FAM109BQ6ICB4 259 aaPredicted RBP12.1□□□□□ -0.47
RETREG3-211ENST00000591547 CCAR1Q8IX12 1150 aaKnown RBP12.1□□□□□ -0.47
RETREG3-211ENST00000591547 TRPV1Q8NER1 839 aa12.1□□□□□ -0.47
RETREG3-211ENST00000591547 NPLOC4Q8TAT6 608 aa12.1□□□□□ -0.47
RETREG3-211ENST00000591547 TGFBRAP1Q8WUH2 860 aa12.1□□□□□ -0.47
RETREG3-211ENST00000591547 MYLIPQ8WY64 445 aa12.1□□□□□ -0.47
RETREG3-211ENST00000591547 LBHD1Q9BQE6 289 aaPredicted RBP12.1□□□□□ -0.47
RETREG3-211ENST00000591547 PI4KBQ9UBF8 816 aa12.1□□□□□ -0.47
RETREG3-211ENST00000591547 HERC5Q9UII4 1024 aaKnown RBP12.1□□□□□ -0.47
RETREG3-211ENST00000591547 ZBTB21Q9ULJ3 1066 aa12.1□□□□□ -0.47
RETREG3-211ENST00000591547 SRGAP3O43295 1099 aa12.09□□□□□ -0.47
RETREG3-211ENST00000591547 ASNSP08243 561 aa12.09□□□□□ -0.47
RETREG3-211ENST00000591547 CYP2C19P33261 490 aa12.09□□□□□ -0.47
RETREG3-211ENST00000591547 MAP2K5Q13163 448 aa12.09□□□□□ -0.47
RETREG3-211ENST00000591547 GJC2Q5T442 439 aaPredicted RBP12.09□□□□□ -0.47
RETREG3-211ENST00000591547 GORABQ5T7V8 394 aa12.09□□□□□ -0.47
RETREG3-211ENST00000591547 ZNF697Q5TEC3 545 aa12.09□□□□□ -0.47
RETREG3-211ENST00000591547 WDR78Q5VTH9 848 aa12.09□□□□□ -0.47
RETREG3-211ENST00000591547 TRMT44Q8IYL2 757 aaKnown RBP12.09□□□□□ -0.47
RETREG3-211ENST00000591547 EDC3Q96F86 508 aaKnown RBP12.09□□□□□ -0.47
RETREG3-211ENST00000591547 APBA2Q99767 749 aa12.09□□□□□ -0.47
RETREG3-211ENST00000591547 TTYH1Q9H313 450 aaPredicted RBP12.09□□□□□ -0.47
RETREG3-211ENST00000591547 SEMA6BQ9H3T3 888 aa12.09□□□□□ -0.47
RETREG3-211ENST00000591547 CWC22Q9HCG8 908 aaKnown RBP12.09□□□□□ -0.47
RETREG3-211ENST00000591547 LRP2BPQ9P2M1 347 aa12.09□□□□□ -0.47
RETREG3-211ENST00000591547 ATP11BQ9Y2G3 1177 aa12.09□□□□□ -0.47
RETREG3-211ENST00000591547 RLFQ13129 1914 aa12.09□□□□□ -0.47
RETREG3-211ENST00000591547 C19orf81C9J6K1 198 aa12.08□□□□□ -0.48
RETREG3-211ENST00000591547 RARSP54136 660 aaKnown RBP12.08□□□□□ -0.48
RETREG3-211ENST00000591547 DYNLL1P63167 89 aaKnown RBP12.08□□□□□ -0.48
RETREG3-211ENST00000591547 CRACR2BQ8N4Y2 399 aaPredicted RBP12.08□□□□□ -0.48
RETREG3-211ENST00000591547 MAFAQ8NHW3 353 aaPredicted RBP12.08□□□□□ -0.48
RETREG3-211ENST00000591547 BTBD7Q9P203 1132 aa12.08□□□□□ -0.48
RETREG3-211ENST00000591547 DDX20Q9UHI6 824 aaKnown RBP12.08□□□□□ -0.48
RETREG3-211ENST00000591547 AKAP2Q9Y2D5 859 aa12.08□□□□□ -0.48
RETREG3-211ENST00000591547 FLT1P17948 1338 aa12.08□□□□□ -0.48
RETREG3-211ENST00000591547 GH2P01242 217 aa12.07□□□□□ -0.48
RETREG3-211ENST00000591547 MYCNP04198 464 aaPredicted RBP12.07□□□□□ -0.48
RETREG3-211ENST00000591547 ARID4AP29374 1257 aaPredicted RBP12.07□□□□□ -0.48
RETREG3-211ENST00000591547 NAA16Q6N069 864 aaPredicted RBP12.07□□□□□ -0.48
RETREG3-211ENST00000591547 USP17L2Q6R6M4 530 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms