RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 SLC45A1Q9Y2W3 748 aa11.65□□□□□ -0.54
BRCA1-226ENST00000591534 MKI67P46013 3256 aaKnown RBP11.65□□□□□ -0.54
BRCA1-226ENST00000591534 PDS5AQ29RF7 1337 aaKnown RBP11.64□□□□□ -0.55
BRCA1-226ENST00000591534 MYPNQ86TC9 1320 aa11.64□□□□□ -0.55
BRCA1-226ENST00000591534 CTNND1O60716 968 aaKnown RBP11.64□□□□□ -0.55
BRCA1-226ENST00000591534 PTPREP23469 700 aa11.64□□□□□ -0.55
BRCA1-226ENST00000591534 RGS3P49796 1198 aa11.64□□□□□ -0.55
BRCA1-226ENST00000591534 GSTO1P78417 241 aa11.64□□□□□ -0.55
BRCA1-226ENST00000591534 CAP1Q01518 475 aa11.64□□□□□ -0.55
BRCA1-226ENST00000591534 CCDC102BQ68D86 513 aa11.64□□□□□ -0.55
BRCA1-226ENST00000591534 RBM27Q9P2N5 1060 aaKnown RBP11.64□□□□□ -0.55
BRCA1-226ENST00000591534 ABCF2Q9UG63 623 aa11.64□□□□□ -0.55
BRCA1-226ENST00000591534 ZHX2Q9Y6X8 837 aa11.64□□□□□ -0.55
BRCA1-226ENST00000591534 IPO8O15397 1037 aaKnown RBP11.63□□□□□ -0.55
BRCA1-226ENST00000591534 LDHCP07864 332 aa11.63□□□□□ -0.55
BRCA1-226ENST00000591534 PTPRAP18433 802 aa11.63□□□□□ -0.55
BRCA1-226ENST00000591534 PHKA1P46020 1223 aa11.63□□□□□ -0.55
BRCA1-226ENST00000591534 GORABQ5T7V8 394 aa11.63□□□□□ -0.55
BRCA1-226ENST00000591534 SMCR8Q8TEV9 937 aaPredicted RBP11.63□□□□□ -0.55
BRCA1-226ENST00000591534 ARHGAP45Q92619 1136 aa11.63□□□□□ -0.55
BRCA1-226ENST00000591534 DPF3Q92784 378 aa11.63□□□□□ -0.55
BRCA1-226ENST00000591534 FAM217BQ9NTX9 383 aaPredicted RBP11.63□□□□□ -0.55
BRCA1-226ENST00000591534 PNMA3Q9UL41 463 aa11.63□□□□□ -0.55
BRCA1-226ENST00000591534 OTOFQ9HC10 1997 aa11.63□□□□□ -0.55
BRCA1-226ENST00000591534 GAKO14976 1311 aa11.62□□□□□ -0.55
BRCA1-226ENST00000591534 A0A0G2JLL6 359 aaPredicted RBP11.62□□□□□ -0.55
BRCA1-226ENST00000591534 SRGAP3O43295 1099 aa11.62□□□□□ -0.55
BRCA1-226ENST00000591534 GJB1P08034 283 aa11.62□□□□□ -0.55
BRCA1-226ENST00000591534 GJA8P48165 433 aa11.62□□□□□ -0.55
BRCA1-226ENST00000591534 PABPC4Q13310 644 aaKnown RBP eCLIP11.62□□□□□ -0.55
BRCA1-226ENST00000591534 GADL1Q6ZQY3 521 aa11.62□□□□□ -0.55
BRCA1-226ENST00000591534 PRRT2Q7Z6L0 340 aaPredicted RBP11.62□□□□□ -0.55
BRCA1-226ENST00000591534 NOL10Q9BSC4 688 aaKnown RBP11.62□□□□□ -0.55
BRCA1-226ENST00000591534 TBC1D2Q9BYX2 928 aa11.62□□□□□ -0.55
BRCA1-226ENST00000591534 RNF208Q9H0X6 261 aa11.62□□□□□ -0.55
BRCA1-226ENST00000591534 NR2E3Q9Y5X4 410 aa11.62□□□□□ -0.55
BRCA1-226ENST00000591534 PHF20L1A8MW92 1017 aa11.61□□□□□ -0.55
BRCA1-226ENST00000591534 BCRP11274 1271 aa11.61□□□□□ -0.55
BRCA1-226ENST00000591534 CCL5P13501 91 aa11.61□□□□□ -0.55
BRCA1-226ENST00000591534 BTDP43251 543 aa11.61□□□□□ -0.55
BRCA1-226ENST00000591534 EMP3P54852 163 aa11.61□□□□□ -0.55
BRCA1-226ENST00000591534 TIMM10P62072 90 aa11.61□□□□□ -0.55
BRCA1-226ENST00000591534 MAP3K10Q02779 954 aa11.61□□□□□ -0.55
BRCA1-226ENST00000591534 MOGSQ13724 837 aa11.61□□□□□ -0.55
BRCA1-226ENST00000591534 RASGRF1Q13972 1273 aa11.61□□□□□ -0.55
BRCA1-226ENST00000591534 NUDT18Q6ZVK8 323 aa11.61□□□□□ -0.55
BRCA1-226ENST00000591534 COA7Q96BR5 231 aa11.61□□□□□ -0.55
BRCA1-226ENST00000591534 AFG3L2Q9Y4W6 797 aa11.61□□□□□ -0.55
BRCA1-226ENST00000591534 RBBP6Q7Z6E9 1792 aaKnown RBP11.61□□□□□ -0.55
BRCA1-226ENST00000591534 MROH7-TTC4A0A0A0MT08 1334 aa11.6□□□□□ -0.55
BRCA1-226ENST00000591534 ZBED9Q6R2W3 1325 aa11.6□□□□□ -0.55
BRCA1-226ENST00000591534 ADGRA2Q96PE1 1338 aa11.6□□□□□ -0.55
BRCA1-226ENST00000591534 GPR75-ASB3A0A0A6YYF3 556 aa11.6□□□□□ -0.55
BRCA1-226ENST00000591534 A0A1B0GUL7 405 aa11.6□□□□□ -0.55
BRCA1-226ENST00000591534 PPP1R3GB7ZBB8 358 aa11.6□□□□□ -0.55
BRCA1-226ENST00000591534 H0YGN5 161 aa11.6□□□□□ -0.55
BRCA1-226ENST00000591534 TNPO2O14787 897 aaKnown RBP11.6□□□□□ -0.55
BRCA1-226ENST00000591534 CYP2C8P10632 490 aa11.6□□□□□ -0.55
BRCA1-226ENST00000591534 HNRNPUQ00839 825 aaKnown RBP eCLIP11.6□□□□□ -0.55
BRCA1-226ENST00000591534 PRKCZQ05513 592 aa11.6□□□□□ -0.55
BRCA1-226ENST00000591534 PICALMQ13492 652 aa11.6□□□□□ -0.55
BRCA1-226ENST00000591534 PROX2Q3B8N5 592 aa11.6□□□□□ -0.55
BRCA1-226ENST00000591534 GPAT2Q6NUI2 795 aa11.6□□□□□ -0.55
BRCA1-226ENST00000591534 ZFPM1Q8IX07 1006 aa11.6□□□□□ -0.55
BRCA1-226ENST00000591534 XAGE2Q96GT9 111 aa11.6□□□□□ -0.55
BRCA1-226ENST00000591534 NEUROD6Q96NK8 337 aa11.6□□□□□ -0.55
BRCA1-226ENST00000591534 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.6□□□□□ -0.55
BRCA1-226ENST00000591534 PA2G4Q9UQ80 394 aaKnown RBP11.6□□□□□ -0.55
BRCA1-226ENST00000591534 BRCA2P51587 3418 aa11.6□□□□□ -0.55
BRCA1-226ENST00000591534 KIAA0100Q14667 2235 aaKnown RBP11.6□□□□□ -0.55
BRCA1-226ENST00000591534 POTEB3A0JP26 581 aa11.59□□□□□ -0.55
BRCA1-226ENST00000591534 RCCD1A6NED2 376 aa11.59□□□□□ -0.55
BRCA1-226ENST00000591534 TRIM75PA6NK02 468 aa11.59□□□□□ -0.55
BRCA1-226ENST00000591534 SMAPO00193 183 aa11.59□□□□□ -0.55
BRCA1-226ENST00000591534 ADCY3O60266 1144 aa11.59□□□□□ -0.55
BRCA1-226ENST00000591534 ADORA1P30542 326 aa11.59□□□□□ -0.55
BRCA1-226ENST00000591534 FXR1P51114 621 aaKnown RBP eCLIP11.59□□□□□ -0.55
BRCA1-226ENST00000591534 MECOMQ03112 1051 aa11.59□□□□□ -0.55
BRCA1-226ENST00000591534 G3BP1Q13283 466 aaKnown RBP eCLIP11.59□□□□□ -0.55
BRCA1-226ENST00000591534 MTX1Q13505 466 aa11.59□□□□□ -0.55
BRCA1-226ENST00000591534 IRF5Q13568 498 aa11.59□□□□□ -0.55
BRCA1-226ENST00000591534 MTFR1Q15390 333 aa11.59□□□□□ -0.55
BRCA1-226ENST00000591534 POTEBQ6S5H4 581 aa11.59□□□□□ -0.55
BRCA1-226ENST00000591534 KCNK17Q96T54 332 aa11.59□□□□□ -0.55
BRCA1-226ENST00000591534 MEIS3Q99687 375 aa11.59□□□□□ -0.55
BRCA1-226ENST00000591534 OSBPL5Q9H0X9 879 aaPredicted RBP11.59□□□□□ -0.55
BRCA1-226ENST00000591534 AGTPBP1Q9UPW5 1226 aa11.59□□□□□ -0.55
BRCA1-226ENST00000591534 TNNQ9UQP3 1299 aa11.59□□□□□ -0.55
BRCA1-226ENST00000591534 DDTLA6NHG4 134 aaPredicted RBP11.58□□□□□ -0.56
BRCA1-226ENST00000591534 IGSF3O75054 1194 aa11.58□□□□□ -0.56
BRCA1-226ENST00000591534 BAG3O95817 575 aa11.58□□□□□ -0.56
BRCA1-226ENST00000591534 TFRCP02786 760 aaKnown RBP11.58□□□□□ -0.56
BRCA1-226ENST00000591534 GNAI2P04899 355 aa11.58□□□□□ -0.56
BRCA1-226ENST00000591534 UQCRFS1P1P0C7P4 283 aa11.58□□□□□ -0.56
BRCA1-226ENST00000591534 CTGFP29279 349 aa11.58□□□□□ -0.56
BRCA1-226ENST00000591534 GCLCP48506 637 aaPredicted RBP11.58□□□□□ -0.56
BRCA1-226ENST00000591534 RARSP54136 660 aaKnown RBP11.58□□□□□ -0.56
BRCA1-226ENST00000591534 TFCP2Q12800 502 aa11.58□□□□□ -0.56
BRCA1-226ENST00000591534 SPATA5Q8NB90 893 aa11.58□□□□□ -0.56
BRCA1-226ENST00000591534 PROCA1Q8NCQ7 364 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms