RNA–Protein interactions for RNA: ENST00000590208.5

MBD1-222, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-222ENST00000590208 NOSTRINQ8IVI9 506 aa17.89■□□□□ 0.46
MBD1-222ENST00000590208 CCDC82Q8N4S0 544 aa17.89■□□□□ 0.46
MBD1-222ENST00000590208 AFAP1L1Q8TED9 768 aa17.89■□□□□ 0.46
MBD1-222ENST00000590208 MED4Q9NPJ6 270 aa17.89■□□□□ 0.46
MBD1-222ENST00000590208 PCDHB6Q9Y5E3 794 aa17.89■□□□□ 0.46
MBD1-222ENST00000590208 CDKL5O76039 1030 aa17.89■□□□□ 0.45
MBD1-222ENST00000590208 GCP02774 474 aa17.89■□□□□ 0.45
MBD1-222ENST00000590208 PTPREP23469 700 aa17.89■□□□□ 0.45
MBD1-222ENST00000590208 CCT6AP40227 531 aaKnown RBP17.89■□□□□ 0.45
MBD1-222ENST00000590208 PIP4K2BP78356 416 aa17.89■□□□□ 0.45
MBD1-222ENST00000590208 WHAMMP3Q1A5X7 153 aa17.89■□□□□ 0.45
MBD1-222ENST00000590208 KCNH5Q8NCM2 988 aa17.89■□□□□ 0.45
MBD1-222ENST00000590208 SLF1Q9BQI6 1058 aa17.89■□□□□ 0.45
MBD1-222ENST00000590208 HDAC6Q9UBN7 1215 aa17.89■□□□□ 0.45
MBD1-222ENST00000590208 MYO6Q9UM54 1294 aa17.89■□□□□ 0.45
MBD1-222ENST00000590208 OVOS2A0A0G2JMS6 1433 aa17.89■□□□□ 0.45
MBD1-222ENST00000590208 PRPF6O94906 941 aaKnown RBP17.88■□□□□ 0.45
MBD1-222ENST00000590208 NFXL1Q6ZNB6 911 aa17.88■□□□□ 0.45
MBD1-222ENST00000590208 RABEP2Q9H5N1 569 aa17.88■□□□□ 0.45
MBD1-222ENST00000590208 MYH8P13535 1937 aa17.88■□□□□ 0.45
MBD1-222ENST00000590208 ZBTB43O43298 467 aa17.88■□□□□ 0.45
MBD1-222ENST00000590208 TAF7LQ5H9L4 462 aa17.88■□□□□ 0.45
MBD1-222ENST00000590208 CPLX2Q6PUV4 134 aaKnown RBP17.88■□□□□ 0.45
MBD1-222ENST00000590208 APPBP2Q92624 585 aa17.88■□□□□ 0.45
MBD1-222ENST00000590208 CCDC85AQ96PX6 553 aaPredicted RBP17.88■□□□□ 0.45
MBD1-222ENST00000590208 GOLGA8AA7E2F4 631 aa17.88■□□□□ 0.45
MBD1-222ENST00000590208 H7C1W4 665 aa17.88■□□□□ 0.45
MBD1-222ENST00000590208 AMPD2Q01433 879 aa17.88■□□□□ 0.45
MBD1-222ENST00000590208 NR5A1Q13285 461 aa17.88■□□□□ 0.45
MBD1-222ENST00000590208 GSPT2Q8IYD1 628 aaKnown RBP17.88■□□□□ 0.45
MBD1-222ENST00000590208 MICALL1Q8N3F8 863 aa17.88■□□□□ 0.45
MBD1-222ENST00000590208 HINFPQ9BQA5 517 aa17.88■□□□□ 0.45
MBD1-222ENST00000590208 TTF2Q9UNY4 1162 aaKnown RBP17.88■□□□□ 0.45
MBD1-222ENST00000590208 TFR2Q9UP52 801 aa17.88■□□□□ 0.45
MBD1-222ENST00000590208 SIPA1L3O60292 1781 aaPredicted RBP17.87■□□□□ 0.45
MBD1-222ENST00000590208 SNRPA1P09661 255 aaKnown RBP17.87■□□□□ 0.45
MBD1-222ENST00000590208 ERCC5P28715 1186 aaPredicted RBP17.87■□□□□ 0.45
MBD1-222ENST00000590208 TUBB2AQ13885 445 aa17.87■□□□□ 0.45
MBD1-222ENST00000590208 SPATA1Q5VX52 437 aa17.87■□□□□ 0.45
MBD1-222ENST00000590208 DIS3L2Q8IYB7 885 aaKnown RBP17.87■□□□□ 0.45
MBD1-222ENST00000590208 XAGE2Q96GT9 111 aa17.87■□□□□ 0.45
MBD1-222ENST00000590208 TUBB2BQ9BVA1 445 aa17.87■□□□□ 0.45
MBD1-222ENST00000590208 GEMIN8Q9NWZ8 242 aaKnown RBP17.87■□□□□ 0.45
MBD1-222ENST00000590208 SYNRGQ9UMZ2 1314 aa17.87■□□□□ 0.45
MBD1-222ENST00000590208 USP54Q70EL1 1684 aa17.87■□□□□ 0.45
MBD1-222ENST00000590208 SRGAP2O75044 1071 aa17.87■□□□□ 0.45
MBD1-222ENST00000590208 APPP05067 770 aa17.87■□□□□ 0.45
MBD1-222ENST00000590208 DNAJC21Q5F1R6 531 aaKnown RBP17.87■□□□□ 0.45
MBD1-222ENST00000590208 ELOA2Q8IYF1 753 aaPredicted RBP17.87■□□□□ 0.45
MBD1-222ENST00000590208 CMTR1Q8N1G2 835 aaKnown RBP17.87■□□□□ 0.45
MBD1-222ENST00000590208 CSRNP2Q9H175 543 aa17.87■□□□□ 0.45
MBD1-222ENST00000590208 ACBD3Q9H3P7 528 aa17.87■□□□□ 0.45
MBD1-222ENST00000590208 WWC3Q9ULE0 1092 aa17.87■□□□□ 0.45
MBD1-222ENST00000590208 GUCA1BQ9UMX6 200 aa17.87■□□□□ 0.45
MBD1-222ENST00000590208 ZNF335Q9H4Z2 1342 aaPredicted RBP17.86■□□□□ 0.45
MBD1-222ENST00000590208 A0A087X0B3 334 aa17.86■□□□□ 0.45
MBD1-222ENST00000590208 ESCO1Q5FWF5 840 aa17.86■□□□□ 0.45
MBD1-222ENST00000590208 WDR93Q6P2C0 686 aa17.86■□□□□ 0.45
MBD1-222ENST00000590208 TRIML1Q8N9V2 468 aa17.86■□□□□ 0.45
MBD1-222ENST00000590208 BRMS1Q9HCU9 246 aa17.86■□□□□ 0.45
MBD1-222ENST00000590208 HPCAL4Q9UM19 191 aa17.86■□□□□ 0.45
MBD1-222ENST00000590208 TADA2BQ86TJ2 420 aa17.86■□□□□ 0.45
MBD1-222ENST00000590208 PLBD2Q8NHP8 589 aa17.86■□□□□ 0.45
MBD1-222ENST00000590208 EHD4Q9H223 541 aa17.86■□□□□ 0.45
MBD1-222ENST00000590208 CEP126Q9P2H0 1117 aa17.86■□□□□ 0.45
MBD1-222ENST00000590208 CUL4BQ13620 913 aa17.85■□□□□ 0.45
MBD1-222ENST00000590208 TTLL7Q6ZT98 887 aa17.85■□□□□ 0.45
MBD1-222ENST00000590208 CNGA4Q8IV77 575 aa17.85■□□□□ 0.45
MBD1-222ENST00000590208 CCDC148Q8NFR7 591 aa17.85■□□□□ 0.45
MBD1-222ENST00000590208 SPATA20Q8TB22 786 aa17.85■□□□□ 0.45
MBD1-222ENST00000590208 STAMQ92783 540 aa17.85■□□□□ 0.45
MBD1-222ENST00000590208 ZC3H4Q9UPT8 1303 aaKnown RBP17.85■□□□□ 0.45
MBD1-222ENST00000590208 KDM6AO15550 1401 aaPredicted RBP17.85■□□□□ 0.45
MBD1-222ENST00000590208 GGCXP38435 758 aa17.85■□□□□ 0.45
MBD1-222ENST00000590208 TUBB4BP68371 445 aa17.85■□□□□ 0.45
MBD1-222ENST00000590208 DPYDQ12882 1025 aa17.85■□□□□ 0.45
MBD1-222ENST00000590208 EFCAB13Q8IY85 973 aa17.85■□□□□ 0.45
MBD1-222ENST00000590208 IGDCC4Q8TDY8 1250 aa17.85■□□□□ 0.45
MBD1-222ENST00000590208 EPSTI1Q96J88 318 aa17.85■□□□□ 0.45
MBD1-222ENST00000590208 MMS19Q96T76 1030 aa17.85■□□□□ 0.45
MBD1-222ENST00000590208 CHP1Q99653 195 aa17.85■□□□□ 0.45
MBD1-222ENST00000590208 ZFYP08048 801 aaPredicted RBP17.85■□□□□ 0.45
MBD1-222ENST00000590208 AARSP49588 968 aaKnown RBP eCLIP17.85■□□□□ 0.45
MBD1-222ENST00000590208 CDKAL1Q5VV42 579 aa17.85■□□□□ 0.45
MBD1-222ENST00000590208 TTC5Q8N0Z6 440 aa17.85■□□□□ 0.45
MBD1-222ENST00000590208 GPATCH11Q8N954 259 aa17.85■□□□□ 0.45
MBD1-222ENST00000590208 SMARCC1Q92922 1105 aaPredicted RBP17.85■□□□□ 0.45
MBD1-222ENST00000590208 CAPZA3Q96KX2 299 aa17.85■□□□□ 0.45
MBD1-222ENST00000590208 VPS16Q9H269 839 aa17.85■□□□□ 0.45
MBD1-222ENST00000590208 DEF6Q9H4E7 631 aa17.85■□□□□ 0.45
MBD1-222ENST00000590208 ABHD10Q9NUJ1 306 aa17.85■□□□□ 0.45
MBD1-222ENST00000590208 WDR19Q8NEZ3 1342 aa17.84■□□□□ 0.45
MBD1-222ENST00000590208 EXOC5O00471 708 aa17.84■□□□□ 0.45
MBD1-222ENST00000590208 MYBL2P10244 700 aa17.84■□□□□ 0.45
MBD1-222ENST00000590208 LIG3P49916 1009 aa17.84■□□□□ 0.45
MBD1-222ENST00000590208 USP14P54578 494 aa17.84■□□□□ 0.45
MBD1-222ENST00000590208 SSRP1Q08945 709 aaKnown RBP17.84■□□□□ 0.45
MBD1-222ENST00000590208 OXER1Q8TDS5 423 aa17.84■□□□□ 0.45
MBD1-222ENST00000590208 KAT2BQ92831 832 aa17.84■□□□□ 0.45
MBD1-222ENST00000590208 CDHR2Q9BYE9 1310 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms