RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 HMG20BQ9P0W2 317 aa8.77□□□□□ -1.01
SMAD4-210ENST00000590061 AK9Q5TCS8 1911 aa8.77□□□□□ -1.01
SMAD4-210ENST00000590061 TNRC6CQ9HCJ0 1690 aaKnown RBP8.77□□□□□ -1.01
SMAD4-210ENST00000590061 FAM205AQ6ZU69 1335 aa8.77□□□□□ -1.01
SMAD4-210ENST00000590061 LRRC37AA6NMS7 1700 aa8.77□□□□□ -1.01
SMAD4-210ENST00000590061 C21orf2O43822 256 aa8.76□□□□□ -1.01
SMAD4-210ENST00000590061 GRIN3BO60391 1043 aa8.76□□□□□ -1.01
SMAD4-210ENST00000590061 LDHBP07195 334 aaKnown RBP8.76□□□□□ -1.01
SMAD4-210ENST00000590061 ZKSCAN1P17029 563 aaPredicted RBP8.76□□□□□ -1.01
SMAD4-210ENST00000590061 ADORA1P30542 326 aa8.76□□□□□ -1.01
SMAD4-210ENST00000590061 MCAMP43121 646 aa8.76□□□□□ -1.01
SMAD4-210ENST00000590061 GYG1P46976 350 aa8.76□□□□□ -1.01
SMAD4-210ENST00000590061 HDLBPQ00341 1268 aaKnown RBP8.76□□□□□ -1.01
SMAD4-210ENST00000590061 RASGRF1Q13972 1273 aa8.76□□□□□ -1.01
SMAD4-210ENST00000590061 TNIP1Q15025 636 aa8.76□□□□□ -1.01
SMAD4-210ENST00000590061 SLC9C2Q5TAH2 1124 aa8.76□□□□□ -1.01
SMAD4-210ENST00000590061 STRIP1Q5VSL9 837 aa8.76□□□□□ -1.01
SMAD4-210ENST00000590061 DZIP1Q86YF9 867 aaKnown RBP8.76□□□□□ -1.01
SMAD4-210ENST00000590061 NIM1KQ8IY84 436 aa8.76□□□□□ -1.01
SMAD4-210ENST00000590061 APPBP2Q92624 585 aa8.76□□□□□ -1.01
SMAD4-210ENST00000590061 CDK15Q96Q40 435 aa8.76□□□□□ -1.01
SMAD4-210ENST00000590061 ESYT1Q9BSJ8 1104 aa8.76□□□□□ -1.01
SMAD4-210ENST00000590061 SNRKQ9NRH2 765 aa8.76□□□□□ -1.01
SMAD4-210ENST00000590061 TLR7Q9NYK1 1049 aaKnown RBP8.76□□□□□ -1.01
SMAD4-210ENST00000590061 POLLQ9UGP5 575 aa8.76□□□□□ -1.01
SMAD4-210ENST00000590061 PPIP5K2O43314 1243 aa8.75□□□□□ -1.01
SMAD4-210ENST00000590061 IDH1O75874 414 aaKnown RBP8.75□□□□□ -1.01
SMAD4-210ENST00000590061 KCNA3P22001 575 aa8.75□□□□□ -1.01
SMAD4-210ENST00000590061 ZAP70P43403 619 aa8.75□□□□□ -1.01
SMAD4-210ENST00000590061 ANAPC15P60006 121 aa8.75□□□□□ -1.01
SMAD4-210ENST00000590061 KRT32Q14532 448 aa8.75□□□□□ -1.01
SMAD4-210ENST00000590061 C8orf34Q49A92 452 aa8.75□□□□□ -1.01
SMAD4-210ENST00000590061 TTLL5Q6EMB2 1281 aa8.75□□□□□ -1.01
SMAD4-210ENST00000590061 SH3BP5LQ7L8J4 393 aa8.75□□□□□ -1.01
SMAD4-210ENST00000590061 AMOTL1Q8IY63 956 aa8.75□□□□□ -1.01
SMAD4-210ENST00000590061 LARGE2Q8N3Y3 721 aa8.75□□□□□ -1.01
SMAD4-210ENST00000590061 OGFOD1Q8N543 542 aa8.75□□□□□ -1.01
SMAD4-210ENST00000590061 RAI14Q9P0K7 980 aa8.75□□□□□ -1.01
SMAD4-210ENST00000590061 ABCF2Q9UG63 623 aa8.75□□□□□ -1.01
SMAD4-210ENST00000590061 HDAC9Q9UKV0 1011 aa8.75□□□□□ -1.01
SMAD4-210ENST00000590061 USP17L3A6NCW0 530 aa8.74□□□□□ -1.01
SMAD4-210ENST00000590061 USP17L4A6NCW7 530 aa8.74□□□□□ -1.01
SMAD4-210ENST00000590061 SGSM2O43147 1006 aa8.74□□□□□ -1.01
SMAD4-210ENST00000590061 CYP2E1P05181 493 aaPredicted RBP8.74□□□□□ -1.01
SMAD4-210ENST00000590061 RPS12P25398 132 aaKnown RBP8.74□□□□□ -1.01
SMAD4-210ENST00000590061 ZMYM1Q5SVZ6 1142 aa8.74□□□□□ -1.01
SMAD4-210ENST00000590061 NAA16Q6N069 864 aaPredicted RBP8.74□□□□□ -1.01
SMAD4-210ENST00000590061 GIMAP6Q6P9H5 292 aa8.74□□□□□ -1.01
SMAD4-210ENST00000590061 CWC27Q6UX04 472 aaKnown RBP8.74□□□□□ -1.01
SMAD4-210ENST00000590061 USP17L1Q7RTZ2 530 aa8.74□□□□□ -1.01
SMAD4-210ENST00000590061 ZNF784Q8NCA9 323 aaPredicted RBP8.74□□□□□ -1.01
SMAD4-210ENST00000590061 LRRN4Q8WUT4 740 aa8.74□□□□□ -1.01
SMAD4-210ENST00000590061 AIDAQ96BJ3 306 aa8.74□□□□□ -1.01
SMAD4-210ENST00000590061 CHMP4CQ96CF2 233 aa8.74□□□□□ -1.01
SMAD4-210ENST00000590061 GOPCQ9HD26 462 aa8.74□□□□□ -1.01
SMAD4-210ENST00000590061 ZNRF3Q9ULT6 936 aa8.74□□□□□ -1.01
SMAD4-210ENST00000590061 BCS1LQ9Y276 419 aa8.74□□□□□ -1.01
SMAD4-210ENST00000590061 ZC3H4Q9UPT8 1303 aaKnown RBP8.74□□□□□ -1.01
SMAD4-210ENST00000590061 CHD4Q14839 1912 aa8.74□□□□□ -1.01
SMAD4-210ENST00000590061 SLX4Q8IY92 1834 aa8.73□□□□□ -1.01
SMAD4-210ENST00000590061 TAF1P21675 1872 aa8.73□□□□□ -1.01
SMAD4-210ENST00000590061 SLC3A2P08195 630 aaKnown RBP8.73□□□□□ -1.01
SMAD4-210ENST00000590061 PCP11498 1178 aaKnown RBP8.73□□□□□ -1.01
SMAD4-210ENST00000590061 PDE6AP16499 860 aa8.73□□□□□ -1.01
SMAD4-210ENST00000590061 ADD2P35612 726 aa8.73□□□□□ -1.01
SMAD4-210ENST00000590061 ANP32AP39687 249 aaKnown RBP8.73□□□□□ -1.01
SMAD4-210ENST00000590061 IARSP41252 1262 aaKnown RBP8.73□□□□□ -1.01
SMAD4-210ENST00000590061 EIF6P56537 245 aaKnown RBP8.73□□□□□ -1.01
SMAD4-210ENST00000590061 NNTQ13423 1086 aa8.73□□□□□ -1.01
SMAD4-210ENST00000590061 MFSD14BQ5SR56 506 aa8.73□□□□□ -1.01
SMAD4-210ENST00000590061 LCE2AQ5TA79 106 aaPredicted RBP8.73□□□□□ -1.01
SMAD4-210ENST00000590061 TSHZ3Q63HK5 1081 aa8.73□□□□□ -1.01
SMAD4-210ENST00000590061 ARMC2Q8NEN0 867 aa8.73□□□□□ -1.01
SMAD4-210ENST00000590061 FAM174AQ8TBP5 190 aa8.73□□□□□ -1.01
SMAD4-210ENST00000590061 TRIM47Q96LD4 638 aa8.73□□□□□ -1.01
SMAD4-210ENST00000590061 DSCC1Q9BVC3 393 aa8.73□□□□□ -1.01
SMAD4-210ENST00000590061 KLF16Q9BXK1 252 aaPredicted RBP8.73□□□□□ -1.01
SMAD4-210ENST00000590061 FHDC1Q9C0D6 1143 aaPredicted RBP8.73□□□□□ -1.01
SMAD4-210ENST00000590061 ZNF287Q9HBT7 754 aa8.73□□□□□ -1.01
SMAD4-210ENST00000590061 ANO2Q9NQ90 1003 aa8.73□□□□□ -1.01
SMAD4-210ENST00000590061 WASF2Q9Y6W5 498 aa8.73□□□□□ -1.01
SMAD4-210ENST00000590061 CCDC171Q6TFL3 1326 aa8.73□□□□□ -1.01
SMAD4-210ENST00000590061 IRS2Q9Y4H2 1338 aa8.73□□□□□ -1.01
SMAD4-210ENST00000590061 AKAP11Q9UKA4 1901 aa8.72□□□□□ -1.01
SMAD4-210ENST00000590061 COL11A2P13942 1736 aaPredicted RBP8.72□□□□□ -1.01
SMAD4-210ENST00000590061 ECE2O60344 883 aa8.72□□□□□ -1.01
SMAD4-210ENST00000590061 ADH1CP00326 375 aa8.72□□□□□ -1.01
SMAD4-210ENST00000590061 LMNB1P20700 586 aa8.72□□□□□ -1.01
SMAD4-210ENST00000590061 PSMA5P28066 241 aa8.72□□□□□ -1.01
SMAD4-210ENST00000590061 CHAF1AQ13111 956 aaPredicted RBP8.72□□□□□ -1.01
SMAD4-210ENST00000590061 ALX1Q15699 326 aa8.72□□□□□ -1.01
SMAD4-210ENST00000590061 HHIPL2Q6UWX4 724 aa8.72□□□□□ -1.01
SMAD4-210ENST00000590061 TRIM46Q7Z4K8 759 aa8.72□□□□□ -1.01
SMAD4-210ENST00000590061 BPHLQ86WA6 291 aaPredicted RBP8.72□□□□□ -1.01
SMAD4-210ENST00000590061 AGBL3Q8NEM8 1001 aa8.72□□□□□ -1.01
SMAD4-210ENST00000590061 SYT17Q9BSW7 474 aa8.72□□□□□ -1.01
SMAD4-210ENST00000590061 C22orf23Q9BZE7 217 aa8.72□□□□□ -1.01
SMAD4-210ENST00000590061 CRNKL1Q9BZJ0 848 aaKnown RBP8.72□□□□□ -1.01
SMAD4-210ENST00000590061 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.72□□□□□ -1.01
SMAD4-210ENST00000590061 MYH13Q9UKX3 1938 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms