RNA–Protein interactions for RNA: ENST00000589528.1

ACTN4-211, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-211ENST00000589528 USP17L10C9JJH3 530 aa18.72■□□□□ 0.59
ACTN4-211ENST00000589528 MAPK4P31152 587 aa18.72■□□□□ 0.59
ACTN4-211ENST00000589528 HERVK_113P62684 666 aa18.72■□□□□ 0.59
ACTN4-211ENST00000589528 RRP1BQ14684 758 aaKnown RBP18.72■□□□□ 0.59
ACTN4-211ENST00000589528 P2RX7Q99572 595 aaKnown RBP18.72■□□□□ 0.59
ACTN4-211ENST00000589528 AATFQ9NY61 560 aaKnown RBP eCLIP18.72■□□□□ 0.59
ACTN4-211ENST00000589528 XRCC5P13010 732 aaKnown RBP18.71■□□□□ 0.59
ACTN4-211ENST00000589528 HOXA7P31268 230 aaPredicted RBP18.71■□□□□ 0.59
ACTN4-211ENST00000589528 MCAMP43121 646 aa18.71■□□□□ 0.59
ACTN4-211ENST00000589528 MTX1Q13505 466 aa18.71■□□□□ 0.59
ACTN4-211ENST00000589528 LRIT3Q3SXY7 679 aa18.71■□□□□ 0.59
ACTN4-211ENST00000589528 Q7L0L9 218 aa18.71■□□□□ 0.59
ACTN4-211ENST00000589528 MAPKAPK5Q8IW41 473 aa18.71■□□□□ 0.59
ACTN4-211ENST00000589528 GTF3C2Q8WUA4 911 aaPredicted RBP18.71■□□□□ 0.59
ACTN4-211ENST00000589528 TGFBRAP1Q8WUH2 860 aa18.71■□□□□ 0.59
ACTN4-211ENST00000589528 PAGR1Q9BTK6 254 aa18.71■□□□□ 0.59
ACTN4-211ENST00000589528 GDF11O95390 407 aa18.7■□□□□ 0.58
ACTN4-211ENST00000589528 RGS2P41220 211 aa18.7■□□□□ 0.58
ACTN4-211ENST00000589528 MNX1P50219 401 aaPredicted RBP18.7■□□□□ 0.58
ACTN4-211ENST00000589528 TTC39AQ5SRH9 613 aa18.7■□□□□ 0.58
ACTN4-211ENST00000589528 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.7■□□□□ 0.58
ACTN4-211ENST00000589528 MYO5AQ9Y4I1 1855 aaKnown RBP18.69■□□□□ 0.58
ACTN4-211ENST00000589528 MYH1P12882 1939 aa18.69■□□□□ 0.58
ACTN4-211ENST00000589528 PEX10O60683 326 aa18.69■□□□□ 0.58
ACTN4-211ENST00000589528 HLA-DOAP06340 250 aa18.69■□□□□ 0.58
ACTN4-211ENST00000589528 ERVK-9P63128 1117 aa18.69■□□□□ 0.58
ACTN4-211ENST00000589528 ERVK-24P63145 666 aa18.69■□□□□ 0.58
ACTN4-211ENST00000589528 MAP3K21Q5TCX8 1036 aa18.69■□□□□ 0.58
ACTN4-211ENST00000589528 ATF7IPQ6VMQ6 1270 aa18.69■□□□□ 0.58
ACTN4-211ENST00000589528 FOXP4Q8IVH2 680 aaPredicted RBP18.69■□□□□ 0.58
ACTN4-211ENST00000589528 ARHGAP45Q92619 1136 aa18.69■□□□□ 0.58
ACTN4-211ENST00000589528 TXNRD2Q9NNW7 524 aa18.69■□□□□ 0.58
ACTN4-211ENST00000589528 SNRKQ9NRH2 765 aa18.69■□□□□ 0.58
ACTN4-211ENST00000589528 GINM1Q9NU53 330 aa18.69■□□□□ 0.58
ACTN4-211ENST00000589528 PFASO15067 1338 aa18.69■□□□□ 0.58
ACTN4-211ENST00000589528 GNAI2P04899 355 aa18.68■□□□□ 0.58
ACTN4-211ENST00000589528 CACNB2Q08289 660 aaPredicted RBP18.68■□□□□ 0.58
ACTN4-211ENST00000589528 CCDC158Q5M9N0 1113 aa18.68■□□□□ 0.58
ACTN4-211ENST00000589528 GPR142Q7Z601 462 aa18.68■□□□□ 0.58
ACTN4-211ENST00000589528 TRMT2AQ8IZ69 625 aaKnown RBP18.68■□□□□ 0.58
ACTN4-211ENST00000589528 APBA2Q99767 749 aa18.68■□□□□ 0.58
ACTN4-211ENST00000589528 PALD1Q9ULE6 856 aa18.68■□□□□ 0.58
ACTN4-211ENST00000589528 FLT1P17948 1338 aa18.68■□□□□ 0.58
ACTN4-211ENST00000589528 FRMPD3Q5JV73 1810 aa18.67■□□□□ 0.58
ACTN4-211ENST00000589528 RARSP54136 660 aaKnown RBP18.67■□□□□ 0.58
ACTN4-211ENST00000589528 OS9Q13438 667 aaPredicted RBP18.67■□□□□ 0.58
ACTN4-211ENST00000589528 WDR78Q5VTH9 848 aa18.67■□□□□ 0.58
ACTN4-211ENST00000589528 PLEKHH3Q7Z736 793 aa18.67■□□□□ 0.58
ACTN4-211ENST00000589528 FEZ1Q99689 392 aa18.67■□□□□ 0.58
ACTN4-211ENST00000589528 SAP30BPQ9UHR5 308 aaKnown RBP18.67■□□□□ 0.58
ACTN4-211ENST00000589528 ZBTB21Q9ULJ3 1066 aa18.67■□□□□ 0.58
ACTN4-211ENST00000589528 STXBP5LQ9Y2K9 1186 aa18.67■□□□□ 0.58
ACTN4-211ENST00000589528 IPO8O15397 1037 aaKnown RBP18.66■□□□□ 0.58
ACTN4-211ENST00000589528 GLRX3O76003 335 aaKnown RBP18.66■□□□□ 0.58
ACTN4-211ENST00000589528 CCND3P30281 292 aaPredicted RBP18.66■□□□□ 0.58
ACTN4-211ENST00000589528 CCNA1P78396 465 aa18.66■□□□□ 0.58
ACTN4-211ENST00000589528 USP17L2Q6R6M4 530 aa18.66■□□□□ 0.58
ACTN4-211ENST00000589528 PORCNQ9H237 461 aa18.66■□□□□ 0.58
ACTN4-211ENST00000589528 DNAJC18Q9H819 358 aa18.66■□□□□ 0.58
ACTN4-211ENST00000589528 RBPJLQ9UBG7 517 aa18.66■□□□□ 0.58
ACTN4-211ENST00000589528 PNMA6EA0A0J9YXQ4 647 aa18.65■□□□□ 0.58
ACTN4-211ENST00000589528 MDM2Q00987 491 aaPredicted RBP18.65■□□□□ 0.58
ACTN4-211ENST00000589528 ZYXQ15942 572 aaKnown RBP18.65■□□□□ 0.58
ACTN4-211ENST00000589528 CCL14Q16627 93 aa18.65■□□□□ 0.58
ACTN4-211ENST00000589528 Q3C1V9 767 aa18.65■□□□□ 0.58
ACTN4-211ENST00000589528 MTMR10Q9NXD2 777 aa18.65■□□□□ 0.58
ACTN4-211ENST00000589528 DNAH12Q6ZR08 3092 aa18.65■□□□□ 0.58
ACTN4-211ENST00000589528 PPP4CP60510 307 aa18.64■□□□□ 0.57
ACTN4-211ENST00000589528 JAG1P78504 1218 aa18.64■□□□□ 0.57
ACTN4-211ENST00000589528 LRRC26Q2I0M4 334 aa18.64■□□□□ 0.57
ACTN4-211ENST00000589528 SHROOM1Q2M3G4 852 aaPredicted RBP18.64■□□□□ 0.57
ACTN4-211ENST00000589528 MORN1Q5T089 497 aa18.64■□□□□ 0.57
ACTN4-211ENST00000589528 MFSD14CQ5VZR4 134 aa18.64■□□□□ 0.57
ACTN4-211ENST00000589528 FRAT1Q92837 279 aaPredicted RBP18.64■□□□□ 0.57
ACTN4-211ENST00000589528 LBHD1Q9BQE6 289 aaPredicted RBP18.64■□□□□ 0.57
ACTN4-211ENST00000589528 CUL9Q8IWT3 2517 aa18.63■□□□□ 0.57
ACTN4-211ENST00000589528 GH2P01242 217 aa18.63■□□□□ 0.57
ACTN4-211ENST00000589528 COL6A1P12109 1028 aa18.63■□□□□ 0.57
ACTN4-211ENST00000589528 CNGA1P29973 690 aa18.63■□□□□ 0.57
ACTN4-211ENST00000589528 MAP2K5Q13163 448 aa18.63■□□□□ 0.57
ACTN4-211ENST00000589528 TNNI3KQ59H18 835 aa18.63■□□□□ 0.57
ACTN4-211ENST00000589528 ADGRA1Q86SQ6 560 aa18.63■□□□□ 0.57
ACTN4-211ENST00000589528 METTL16Q86W50 562 aaKnown RBP18.63■□□□□ 0.57
ACTN4-211ENST00000589528 USP6NLQ92738 828 aa18.63■□□□□ 0.57
ACTN4-211ENST00000589528 EDC3Q96F86 508 aaKnown RBP18.63■□□□□ 0.57
ACTN4-211ENST00000589528 EMILIN3Q9NT22 766 aa18.63■□□□□ 0.57
ACTN4-211ENST00000589528 IVNS1ABPQ9Y6Y0 642 aa18.63■□□□□ 0.57
ACTN4-211ENST00000589528 FPGT-TNNI3KV9GXZ4 949 aa18.63■□□□□ 0.57
ACTN4-211ENST00000589528 USP17L15C9J2P7 530 aa18.62■□□□□ 0.57
ACTN4-211ENST00000589528 USP17L13C9JLJ4 530 aa18.62■□□□□ 0.57
ACTN4-211ENST00000589528 USP17L11C9JVI0 530 aa18.62■□□□□ 0.57
ACTN4-211ENST00000589528 USP17L18D6R9N7 530 aa18.62■□□□□ 0.57
ACTN4-211ENST00000589528 USP17L22D6RA61 530 aa18.62■□□□□ 0.57
ACTN4-211ENST00000589528 USP17L17D6RBQ6 530 aa18.62■□□□□ 0.57
ACTN4-211ENST00000589528 USP17L19D6RCP7 530 aa18.62■□□□□ 0.57
ACTN4-211ENST00000589528 USP17L20D6RJB6 530 aa18.62■□□□□ 0.57
ACTN4-211ENST00000589528 USP5P45974 858 aa18.62■□□□□ 0.57
ACTN4-211ENST00000589528 USP17L24Q0WX57 530 aa18.62■□□□□ 0.57
ACTN4-211ENST00000589528 LHX8Q68G74 356 aa18.62■□□□□ 0.57
ACTN4-211ENST00000589528 DBNDD2Q9BQY9 259 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms