RNA–Protein interactions for RNA: ENST00000589445.1

R3HDM4-205, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 705 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-205ENST00000589445 OTUD5Q96G74 571 aa26.69■■□□□ 1.86
R3HDM4-205ENST00000589445 HHIPL1Q96JK4 782 aa26.69■■□□□ 1.86
R3HDM4-205ENST00000589445 CAPNS2Q96L46 248 aa26.69■■□□□ 1.86
R3HDM4-205ENST00000589445 PCDH10Q9P2E7 1040 aa26.69■■□□□ 1.86
R3HDM4-205ENST00000589445 CTNND1O60716 968 aaKnown RBP26.68■■□□□ 1.86
R3HDM4-205ENST00000589445 CDK8P49336 464 aa26.68■■□□□ 1.86
R3HDM4-205ENST00000589445 RRP1BQ14684 758 aaKnown RBP26.68■■□□□ 1.86
R3HDM4-205ENST00000589445 SHROOM1Q2M3G4 852 aaPredicted RBP26.68■■□□□ 1.86
R3HDM4-205ENST00000589445 CERKLQ49MI3 558 aaPredicted RBP26.68■■□□□ 1.86
R3HDM4-205ENST00000589445 CNKSR2Q8WXI2 1034 aa26.68■■□□□ 1.86
R3HDM4-205ENST00000589445 OPTNQ96CV9 577 aa26.68■■□□□ 1.86
R3HDM4-205ENST00000589445 MKNK2Q9HBH9 465 aa26.68■■□□□ 1.86
R3HDM4-205ENST00000589445 CTNNA3Q9UI47 895 aa26.68■■□□□ 1.86
R3HDM4-205ENST00000589445 PTPRFP10586 1907 aa26.67■■□□□ 1.86
R3HDM4-205ENST00000589445 GREB1LQ9C091 1923 aaPredicted RBP26.67■■□□□ 1.86
R3HDM4-205ENST00000589445 PRDM1O75626 825 aa26.67■■□□□ 1.86
R3HDM4-205ENST00000589445 SLC10A3P09131 477 aa26.67■■□□□ 1.86
R3HDM4-205ENST00000589445 CAP2P40123 477 aa26.67■■□□□ 1.86
R3HDM4-205ENST00000589445 ECE1P42892 770 aa26.67■■□□□ 1.86
R3HDM4-205ENST00000589445 IMMTQ16891 758 aaKnown RBP26.67■■□□□ 1.86
R3HDM4-205ENST00000589445 TATDN1Q6P1N9 297 aa26.67■■□□□ 1.86
R3HDM4-205ENST00000589445 TOMM22Q9NS69 142 aa26.67■■□□□ 1.86
R3HDM4-205ENST00000589445 ZBTB21Q9ULJ3 1066 aa26.67■■□□□ 1.86
R3HDM4-205ENST00000589445 U3KPZ7 1027 aaPredicted RBP26.67■■□□□ 1.86
R3HDM4-205ENST00000589445 UNCXA6NJT0 531 aa26.66■■□□□ 1.86
R3HDM4-205ENST00000589445 ZNF213O14771 459 aa26.66■■□□□ 1.86
R3HDM4-205ENST00000589445 LBX1P52954 281 aa26.66■■□□□ 1.86
R3HDM4-205ENST00000589445 PDE4BQ07343 736 aa26.66■■□□□ 1.86
R3HDM4-205ENST00000589445 ABCB5Q2M3G0 1257 aa26.66■■□□□ 1.86
R3HDM4-205ENST00000589445 CCDC84Q86UT8 332 aaPredicted RBP26.66■■□□□ 1.86
R3HDM4-205ENST00000589445 TBC1D10CQ8IV04 446 aa26.66■■□□□ 1.86
R3HDM4-205ENST00000589445 ABHD8Q96I13 439 aa26.66■■□□□ 1.86
R3HDM4-205ENST00000589445 WNK4Q96J92 1243 aa26.66■■□□□ 1.86
R3HDM4-205ENST00000589445 LSG1Q9H089 658 aaKnown RBP26.66■■□□□ 1.86
R3HDM4-205ENST00000589445 ZNF287Q9HBT7 754 aa26.66■■□□□ 1.86
R3HDM4-205ENST00000589445 RBM8AQ9Y5S9 174 aaKnown RBP26.66■■□□□ 1.86
R3HDM4-205ENST00000589445 SPDYE5A6NIY4 337 aa26.65■■□□□ 1.86
R3HDM4-205ENST00000589445 GH2P01242 217 aa26.65■■□□□ 1.86
R3HDM4-205ENST00000589445 TAOK2Q9UL54 1235 aa26.65■■□□□ 1.86
R3HDM4-205ENST00000589445 ASNSP08243 561 aa26.64■■□□□ 1.86
R3HDM4-205ENST00000589445 VEGFBP49765 207 aa26.64■■□□□ 1.86
R3HDM4-205ENST00000589445 RRP12Q5JTH9 1297 aaKnown RBP26.64■■□□□ 1.86
R3HDM4-205ENST00000589445 CCDC102AQ96A19 550 aa26.64■■□□□ 1.86
R3HDM4-205ENST00000589445 ANAPC4Q9UJX5 808 aa26.64■■□□□ 1.86
R3HDM4-205ENST00000589445 MYH4Q9Y623 1939 aa26.63■■□□□ 1.85
R3HDM4-205ENST00000589445 AKR1B1P15121 316 aa26.63■■□□□ 1.85
R3HDM4-205ENST00000589445 JAG1P78504 1218 aa26.63■■□□□ 1.85
R3HDM4-205ENST00000589445 RAB3GAP1Q15042 981 aa26.63■■□□□ 1.85
R3HDM4-205ENST00000589445 ERO1BQ86YB8 467 aa26.63■■□□□ 1.85
R3HDM4-205ENST00000589445 NBPF3Q9H094 633 aa26.63■■□□□ 1.85
R3HDM4-205ENST00000589445 CABP5Q9NP86 173 aa26.63■■□□□ 1.85
R3HDM4-205ENST00000589445 WBP1LQ9NX94 342 aa26.63■■□□□ 1.85
R3HDM4-205ENST00000589445 WDR33Q9C0J8 1336 aaKnown RBP26.63■■□□□ 1.85
R3HDM4-205ENST00000589445 FAM155AB1AL88 458 aaPredicted RBP26.62■■□□□ 1.85
R3HDM4-205ENST00000589445 REC8O95072 547 aa26.62■■□□□ 1.85
R3HDM4-205ENST00000589445 PTPRAP18433 802 aa26.62■■□□□ 1.85
R3HDM4-205ENST00000589445 RASA1P20936 1047 aa26.62■■□□□ 1.85
R3HDM4-205ENST00000589445 SPRYD7Q5W111 196 aa26.62■■□□□ 1.85
R3HDM4-205ENST00000589445 AOC2O75106 756 aa26.61■■□□□ 1.85
R3HDM4-205ENST00000589445 GJA5P36382 358 aa26.61■■□□□ 1.85
R3HDM4-205ENST00000589445 MAP4K1Q92918 833 aa26.61■■□□□ 1.85
R3HDM4-205ENST00000589445 INCENPQ9NQS7 918 aa26.61■■□□□ 1.85
R3HDM4-205ENST00000589445 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.61■■□□□ 1.854e-7■■□□□ 13.8
R3HDM4-205ENST00000589445 NEDD4P46934 1319 aa26.61■■□□□ 1.85
R3HDM4-205ENST00000589445 LOC285556D6RIA3 1793 aa26.61■■□□□ 1.85
R3HDM4-205ENST00000589445 ZBTB48P10074 688 aaPredicted RBP26.6■■□□□ 1.85
R3HDM4-205ENST00000589445 NOGQ13253 232 aa26.6■■□□□ 1.85
R3HDM4-205ENST00000589445 PPIL2Q13356 520 aa26.6■■□□□ 1.85
R3HDM4-205ENST00000589445 AKNAD1Q5T1N1 836 aa26.6■■□□□ 1.85
R3HDM4-205ENST00000589445 MFSD6Q6ZSS7 791 aa26.6■■□□□ 1.85
R3HDM4-205ENST00000589445 TMEM179Q6ZVK1 233 aa26.6■■□□□ 1.85
R3HDM4-205ENST00000589445 CLEC10AQ8IUN9 316 aa26.6■■□□□ 1.85
R3HDM4-205ENST00000589445 ZNF444Q8N0Y2 327 aaPredicted RBP26.6■■□□□ 1.85
R3HDM4-205ENST00000589445 STAG1Q8WVM7 1258 aa26.6■■□□□ 1.85
R3HDM4-205ENST00000589445 CCDC17Q96LX7 622 aa26.6■■□□□ 1.85
R3HDM4-205ENST00000589445 RNF41Q9H4P4 317 aaPredicted RBP26.6■■□□□ 1.85
R3HDM4-205ENST00000589445 ZHX2Q9Y6X8 837 aa26.6■■□□□ 1.85
R3HDM4-205ENST00000589445 TRIM75PA6NK02 468 aa26.59■■□□□ 1.85
R3HDM4-205ENST00000589445 USP17L5A8MUK1 530 aa26.59■■□□□ 1.85
R3HDM4-205ENST00000589445 RANBP6O60518 1105 aaKnown RBP26.59■■□□□ 1.85
R3HDM4-205ENST00000589445 PPATQ06203 517 aa26.59■■□□□ 1.85
R3HDM4-205ENST00000589445 SEPT2Q15019 361 aa26.59■■□□□ 1.85
R3HDM4-205ENST00000589445 AS3MTQ9HBK9 375 aa26.59■■□□□ 1.85
R3HDM4-205ENST00000589445 TSPY2A6NKD2 308 aa26.58■■□□□ 1.85
R3HDM4-205ENST00000589445 CYP21A2P08686 494 aa26.58■■□□□ 1.85
R3HDM4-205ENST00000589445 TSPY3P0CV98 308 aa26.58■■□□□ 1.85
R3HDM4-205ENST00000589445 TSPY8P0CW00 308 aa26.58■■□□□ 1.85
R3HDM4-205ENST00000589445 FAM47AQ5JRC9 791 aa26.58■■□□□ 1.85
R3HDM4-205ENST00000589445 FEZ1Q99689 392 aa26.58■■□□□ 1.85
R3HDM4-205ENST00000589445 GINM1Q9NU53 330 aa26.58■■□□□ 1.85
R3HDM4-205ENST00000589445 TACC3Q9Y6A5 838 aa26.58■■□□□ 1.85
R3HDM4-205ENST00000589445 IRF6O14896 467 aa26.57■■□□□ 1.84
R3HDM4-205ENST00000589445 ORC4O43929 436 aa26.57■■□□□ 1.84
R3HDM4-205ENST00000589445 HSPA8P11142 646 aaKnown RBP26.57■■□□□ 1.84
R3HDM4-205ENST00000589445 MLLT1Q03111 559 aaPredicted RBP26.57■■□□□ 1.84
R3HDM4-205ENST00000589445 PCP11498 1178 aaKnown RBP26.56■■□□□ 1.84
R3HDM4-205ENST00000589445 ATP2B2Q01814 1243 aa26.56■■□□□ 1.84
R3HDM4-205ENST00000589445 ICA1Q05084 483 aa26.56■■□□□ 1.84
R3HDM4-205ENST00000589445 PLIN4Q96Q06 1357 aa26.56■■□□□ 1.84
R3HDM4-205ENST00000589445 SLC27A2O14975 620 aa26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms