RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 SWAP70Q9UH65 585 aa25.26■■□□□ 1.63
R3HDM4-204ENST00000589428 MAP2K2P36507 400 aa25.26■■□□□ 1.63
R3HDM4-204ENST00000589428 CAP2P40123 477 aa25.26■■□□□ 1.63
R3HDM4-204ENST00000589428 GABPAQ06546 454 aa25.26■■□□□ 1.63
R3HDM4-204ENST00000589428 OTUD5Q96G74 571 aa25.26■■□□□ 1.63
R3HDM4-204ENST00000589428 RBM19Q9Y4C8 960 aaKnown RBP25.26■■□□□ 1.63
R3HDM4-204ENST00000589428 DYNLL2Q96FJ2 89 aa25.25■■□□□ 1.63
R3HDM4-204ENST00000589428 U3KPZ7 1027 aaPredicted RBP25.25■■□□□ 1.63
R3HDM4-204ENST00000589428 NECTIN1Q15223 517 aa25.24■■□□□ 1.63
R3HDM4-204ENST00000589428 TATDN1Q6P1N9 297 aa25.24■■□□□ 1.63
R3HDM4-204ENST00000589428 CNKSR2Q8WXI2 1034 aa25.24■■□□□ 1.63
R3HDM4-204ENST00000589428 ROBO3Q96MS0 1386 aa25.24■■□□□ 1.63
R3HDM4-204ENST00000589428 ATAD5Q96QE3 1844 aa25.24■■□□□ 1.63
R3HDM4-204ENST00000589428 MCCP23508 829 aa25.23■■□□□ 1.63
R3HDM4-204ENST00000589428 SHMT1P34896 483 aa25.23■■□□□ 1.63
R3HDM4-204ENST00000589428 PPATQ06203 517 aa25.23■■□□□ 1.63
R3HDM4-204ENST00000589428 ZMYM6O95789 1325 aa25.23■■□□□ 1.63
R3HDM4-204ENST00000589428 GDF11O95390 407 aa25.23■■□□□ 1.63
R3HDM4-204ENST00000589428 ASNSP08243 561 aa25.23■■□□□ 1.63
R3HDM4-204ENST00000589428 KIF23Q02241 960 aaPredicted RBP25.23■■□□□ 1.63
R3HDM4-204ENST00000589428 PPIL2Q13356 520 aa25.23■■□□□ 1.63
R3HDM4-204ENST00000589428 RRP1BQ14684 758 aaKnown RBP25.23■■□□□ 1.63
R3HDM4-204ENST00000589428 ALX1Q15699 326 aa25.23■■□□□ 1.63
R3HDM4-204ENST00000589428 CERKLQ49MI3 558 aaPredicted RBP25.23■■□□□ 1.63
R3HDM4-204ENST00000589428 C16orf86Q6ZW13 317 aa25.23■■□□□ 1.63
R3HDM4-204ENST00000589428 SLC44A5Q8NCS7 719 aa25.23■■□□□ 1.63
R3HDM4-204ENST00000589428 GJA5P36382 358 aa25.22■■□□□ 1.63
R3HDM4-204ENST00000589428 KIF2CQ99661 725 aa25.22■■□□□ 1.63
R3HDM4-204ENST00000589428 GINM1Q9NU53 330 aa25.22■■□□□ 1.63
R3HDM4-204ENST00000589428 MYH8P13535 1937 aa25.21■■□□□ 1.63
R3HDM4-204ENST00000589428 SMIM22K7EJ46 135 aa25.21■■□□□ 1.63
R3HDM4-204ENST00000589428 FGAP02671 866 aa25.21■■□□□ 1.63
R3HDM4-204ENST00000589428 SLC3A2P08195 630 aaKnown RBP25.21■■□□□ 1.63
R3HDM4-204ENST00000589428 PTPRAP18433 802 aa25.21■■□□□ 1.63
R3HDM4-204ENST00000589428 CDK8P49336 464 aa25.21■■□□□ 1.63
R3HDM4-204ENST00000589428 PPARAQ07869 468 aa25.21■■□□□ 1.63
R3HDM4-204ENST00000589428 CREB3L3Q68CJ9 461 aa25.21■■□□□ 1.63
R3HDM4-204ENST00000589428 JMYQ8N9B5 988 aa25.21■■□□□ 1.63
R3HDM4-204ENST00000589428 ZIC5Q96T25 663 aa25.21■■□□□ 1.63
R3HDM4-204ENST00000589428 SLC27A2O14975 620 aa25.2■■□□□ 1.63
R3HDM4-204ENST00000589428 SREBF2Q12772 1141 aa25.2■■□□□ 1.63
R3HDM4-204ENST00000589428 REM2Q8IYK8 340 aaPredicted RBP25.2■■□□□ 1.63
R3HDM4-204ENST00000589428 RASEFQ8IZ41 740 aa25.2■■□□□ 1.63
R3HDM4-204ENST00000589428 KCNB2Q92953 911 aa25.2■■□□□ 1.63
R3HDM4-204ENST00000589428 ZNF287Q9HBT7 754 aa25.2■■□□□ 1.63
R3HDM4-204ENST00000589428 ZBTB21Q9ULJ3 1066 aa25.2■■□□□ 1.63
R3HDM4-204ENST00000589428 ZHX2Q9Y6X8 837 aa25.2■■□□□ 1.63
R3HDM4-204ENST00000589428 MANSC4A6NHS7 340 aaPredicted RBP25.2■■□□□ 1.62
R3HDM4-204ENST00000589428 ABCB5Q2M3G0 1257 aa25.2■■□□□ 1.62
R3HDM4-204ENST00000589428 STK11IPQ8N1F8 1099 aa25.2■■□□□ 1.62
R3HDM4-204ENST00000589428 CABP5Q9NP86 173 aa25.2■■□□□ 1.62
R3HDM4-204ENST00000589428 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.2■■□□□ 1.62
R3HDM4-204ENST00000589428 LAMA4Q16363 1823 aa25.19■■□□□ 1.62
R3HDM4-204ENST00000589428 IRF6O14896 467 aa25.19■■□□□ 1.62
R3HDM4-204ENST00000589428 MAP2K1Q02750 393 aaPredicted RBP25.19■■□□□ 1.62
R3HDM4-204ENST00000589428 TBC1D2Q9BYX2 928 aa25.19■■□□□ 1.62
R3HDM4-204ENST00000589428 SNX14Q9Y5W7 946 aa25.19■■□□□ 1.62
R3HDM4-204ENST00000589428 TAF6LQ9Y6J9 622 aa25.19■■□□□ 1.62
R3HDM4-204ENST00000589428 MPHOSPH10O00566 681 aaKnown RBP25.18■■□□□ 1.62
R3HDM4-204ENST00000589428 GH2P01242 217 aa25.18■■□□□ 1.62
R3HDM4-204ENST00000589428 GTF2A2P52657 109 aa25.18■■□□□ 1.62
R3HDM4-204ENST00000589428 ANAPC15P60006 121 aa25.18■■□□□ 1.62
R3HDM4-204ENST00000589428 IL17RAQ96F46 866 aa25.18■■□□□ 1.62
R3HDM4-204ENST00000589428 MKNK2Q9HBH9 465 aa25.18■■□□□ 1.62
R3HDM4-204ENST00000589428 AS3MTQ9HBK9 375 aa25.18■■□□□ 1.62
R3HDM4-204ENST00000589428 CTNNA3Q9UI47 895 aa25.18■■□□□ 1.62
R3HDM4-204ENST00000589428 USP17L5A8MUK1 530 aa25.17■■□□□ 1.62
R3HDM4-204ENST00000589428 CYP21A2P08686 494 aa25.17■■□□□ 1.62
R3HDM4-204ENST00000589428 PDE4BQ07343 736 aa25.17■■□□□ 1.62
R3HDM4-204ENST00000589428 SNAPC2Q13487 334 aa25.17■■□□□ 1.62
R3HDM4-204ENST00000589428 RNF20Q5VTR2 975 aa25.17■■□□□ 1.62
R3HDM4-204ENST00000589428 CCDC84Q86UT8 332 aaPredicted RBP25.17■■□□□ 1.62
R3HDM4-204ENST00000589428 SHROOM1Q2M3G4 852 aaPredicted RBP25.17■■□□□ 1.62
R3HDM4-204ENST00000589428 CCDC17Q96LX7 622 aa25.17■■□□□ 1.62
R3HDM4-204ENST00000589428 INHBEP58166 350 aa25.16■■□□□ 1.62
R3HDM4-204ENST00000589428 JAG1P78504 1218 aa25.16■■□□□ 1.62
R3HDM4-204ENST00000589428 RAB3GAP1Q15042 981 aa25.16■■□□□ 1.62
R3HDM4-204ENST00000589428 BEGAINQ9BUH8 593 aa25.16■■□□□ 1.62
R3HDM4-204ENST00000589428 ANAPC4Q9UJX5 808 aa25.16■■□□□ 1.62
R3HDM4-204ENST00000589428 KCNH4Q9UQ05 1017 aa25.16■■□□□ 1.62
R3HDM4-204ENST00000589428 ZKSCAN1P17029 563 aaPredicted RBP25.15■■□□□ 1.62
R3HDM4-204ENST00000589428 PCNTO95613 3336 aa25.15■■□□□ 1.62
R3HDM4-204ENST00000589428 CCL15-CCL14A0A0B4J2E2 113 aa25.15■■□□□ 1.62
R3HDM4-204ENST00000589428 CETPP11597 493 aa25.15■■□□□ 1.62
R3HDM4-204ENST00000589428 CTDSPL2Q05D32 466 aa25.15■■□□□ 1.62
R3HDM4-204ENST00000589428 CCL15Q16663 113 aa25.15■■□□□ 1.62
R3HDM4-204ENST00000589428 TMEM179Q6ZVK1 233 aa25.15■■□□□ 1.62
R3HDM4-204ENST00000589428 ZNF280CQ8ND82 737 aa25.15■■□□□ 1.62
R3HDM4-204ENST00000589428 MS4A4AQ96JQ5 239 aa25.15■■□□□ 1.62
R3HDM4-204ENST00000589428 AFG3L2Q9Y4W6 797 aa25.15■■□□□ 1.62
R3HDM4-204ENST00000589428 PHIPQ8WWQ0 1821 aa25.14■■□□□ 1.62
R3HDM4-204ENST00000589428 TRIM75PA6NK02 468 aa25.14■■□□□ 1.61
R3HDM4-204ENST00000589428 CXCL11O14625 94 aa25.14■■□□□ 1.61
R3HDM4-204ENST00000589428 AKR1B1P15121 316 aa25.14■■□□□ 1.61
R3HDM4-204ENST00000589428 HAND2P61296 217 aa25.14■■□□□ 1.61
R3HDM4-204ENST00000589428 IMMTQ16891 758 aaKnown RBP25.14■■□□□ 1.61
R3HDM4-204ENST00000589428 PRDM1O75626 825 aa25.13■■□□□ 1.61
R3HDM4-204ENST00000589428 RASA1P20936 1047 aa25.13■■□□□ 1.61
R3HDM4-204ENST00000589428 TM4SF4P48230 202 aa25.13■■□□□ 1.61
R3HDM4-204ENST00000589428 TSGA10IPQ3SY00 556 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms