RNA–Protein interactions for RNA: ENST00000589419.1

CCBE1-204, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 4

Gene CCBE1, Length 587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-204ENST00000589419 CCDC69A6NI79 296 aa16.24■□□□□ 0.19
CCBE1-204ENST00000589419 GOLGA8BA8MQT2 603 aa16.24■□□□□ 0.19
CCBE1-204ENST00000589419 APOA5Q6Q788 366 aa16.24■□□□□ 0.19
CCBE1-204ENST00000589419 ZSCAN29Q8IWY8 852 aaPredicted RBP16.24■□□□□ 0.19
CCBE1-204ENST00000589419 ZFPM1Q8IX07 1006 aa16.24■□□□□ 0.19
CCBE1-204ENST00000589419 ENAHQ8N8S7 591 aaPredicted RBP16.24■□□□□ 0.19
CCBE1-204ENST00000589419 NEDD1Q8NHV4 660 aa16.24■□□□□ 0.19
CCBE1-204ENST00000589419 ANKS1AQ92625 1134 aa16.24■□□□□ 0.19
CCBE1-204ENST00000589419 LLPHQ9BRT6 129 aaKnown RBP16.24■□□□□ 0.19
CCBE1-204ENST00000589419 GPHNQ9NQX3 736 aaPredicted RBP16.24■□□□□ 0.19
CCBE1-204ENST00000589419 CHMP5Q9NZZ3 219 aa16.24■□□□□ 0.19
CCBE1-204ENST00000589419 BRPF3Q9ULD4 1205 aa16.24■□□□□ 0.19
CCBE1-204ENST00000589419 DDTLA6NHG4 134 aaPredicted RBP16.23■□□□□ 0.19
CCBE1-204ENST00000589419 TCP10L2B9ZVM9 353 aa16.23■□□□□ 0.19
CCBE1-204ENST00000589419 DHX16O60231 1041 aaKnown RBP16.23■□□□□ 0.19
CCBE1-204ENST00000589419 TSPY3P0CV98 308 aa16.23■□□□□ 0.19
CCBE1-204ENST00000589419 TSPY8P0CW00 308 aa16.23■□□□□ 0.19
CCBE1-204ENST00000589419 LMOD1P29536 600 aaPredicted RBP16.23■□□□□ 0.19
CCBE1-204ENST00000589419 SHMT1P34896 483 aa16.23■□□□□ 0.19
CCBE1-204ENST00000589419 TFAP4Q01664 338 aa16.23■□□□□ 0.19
CCBE1-204ENST00000589419 NBPF9Q3BBW0 867 aa16.23■□□□□ 0.19
CCBE1-204ENST00000589419 FAM47AQ5JRC9 791 aa16.23■□□□□ 0.19
CCBE1-204ENST00000589419 PPP4R3BQ5MIZ7 849 aa16.23■□□□□ 0.19
CCBE1-204ENST00000589419 SYNE3Q6ZMZ3 975 aa16.23■□□□□ 0.19
CCBE1-204ENST00000589419 NFXL1Q6ZNB6 911 aa16.23■□□□□ 0.19
CCBE1-204ENST00000589419 DGKHQ86XP1 1220 aa16.23■□□□□ 0.19
CCBE1-204ENST00000589419 CRACR2BQ8N4Y2 399 aaPredicted RBP16.23■□□□□ 0.19
CCBE1-204ENST00000589419 NECAB1Q8N987 351 aa16.23■□□□□ 0.19
CCBE1-204ENST00000589419 SPRYD3Q8NCJ5 442 aa16.23■□□□□ 0.19
CCBE1-204ENST00000589419 CCDC17Q96LX7 622 aa16.23■□□□□ 0.19
CCBE1-204ENST00000589419 TRIM34Q9BYJ4 488 aa16.23■□□□□ 0.19
CCBE1-204ENST00000589419 VEZTQ9HBM0 779 aa16.23■□□□□ 0.19
CCBE1-204ENST00000589419 HERC5Q9UII4 1024 aaKnown RBP16.23■□□□□ 0.19
CCBE1-204ENST00000589419 SMC3Q9UQE7 1217 aa16.23■□□□□ 0.19
CCBE1-204ENST00000589419 SLC12A7Q9Y666 1083 aa16.23■□□□□ 0.19
CCBE1-204ENST00000589419 ZBTB43O43298 467 aa16.22■□□□□ 0.19
CCBE1-204ENST00000589419 DDAH1O94760 285 aa16.22■□□□□ 0.19
CCBE1-204ENST00000589419 SCRN1Q12765 414 aa16.22■□□□□ 0.19
CCBE1-204ENST00000589419 PPP2R5BQ15173 497 aa16.22■□□□□ 0.19
CCBE1-204ENST00000589419 IFIT1BQ5T764 474 aaKnown RBP16.22■□□□□ 0.19
CCBE1-204ENST00000589419 SAMD7Q7Z3H4 446 aa16.22■□□□□ 0.19
CCBE1-204ENST00000589419 APOBEC3FQ8IUX4 373 aaKnown RBP16.22■□□□□ 0.19
CCBE1-204ENST00000589419 L3MBTL3Q96JM7 780 aaPredicted RBP16.22■□□□□ 0.19
CCBE1-204ENST00000589419 CSRNP1Q96S65 589 aa16.22■□□□□ 0.19
CCBE1-204ENST00000589419 ZKSCAN3Q9BRR0 538 aa16.22■□□□□ 0.19
CCBE1-204ENST00000589419 FOXD4L1Q9NU39 408 aa16.22■□□□□ 0.19
CCBE1-204ENST00000589419 HPS5Q9UPZ3 1129 aa16.22■□□□□ 0.19
CCBE1-204ENST00000589419 SCN4AP35499 1836 aa16.22■□□□□ 0.19
CCBE1-204ENST00000589419 CALM1P0DP23 149 aa16.21■□□□□ 0.19
CCBE1-204ENST00000589419 CALM2P0DP24 149 aa16.21■□□□□ 0.19
CCBE1-204ENST00000589419 CALM3P0DP25 149 aa16.21■□□□□ 0.19
CCBE1-204ENST00000589419 PDIA4P13667 645 aaKnown RBP16.21■□□□□ 0.19
CCBE1-204ENST00000589419 NOVP48745 357 aa16.21■□□□□ 0.19
CCBE1-204ENST00000589419 METAP2P50579 478 aaKnown RBP eCLIP16.21■□□□□ 0.19
CCBE1-204ENST00000589419 STK3Q13188 491 aa16.21■□□□□ 0.19
CCBE1-204ENST00000589419 TBC1D10BQ4KMP7 808 aaPredicted RBP16.21■□□□□ 0.19
CCBE1-204ENST00000589419 DPY19L2Q6NUT2 758 aa16.21■□□□□ 0.19
CCBE1-204ENST00000589419 ZNF654Q8IZM8 581 aa16.21■□□□□ 0.19
CCBE1-204ENST00000589419 DNAJC18Q9H819 358 aa16.21■□□□□ 0.19
CCBE1-204ENST00000589419 NAP1L2Q9ULW6 460 aaPredicted RBP16.21■□□□□ 0.19
CCBE1-204ENST00000589419 WDR90Q96KV7 1748 aa16.21■□□□□ 0.19
CCBE1-204ENST00000589419 PITPNM2Q9BZ72 1349 aa16.2■□□□□ 0.18
CCBE1-204ENST00000589419 GOLGA8AA7E2F4 631 aa16.2■□□□□ 0.18
CCBE1-204ENST00000589419 TBC1D12O60347 775 aa16.2■□□□□ 0.18
CCBE1-204ENST00000589419 DDNO94850 711 aaPredicted RBP16.2■□□□□ 0.18
CCBE1-204ENST00000589419 EGFRP00533 1210 aa16.2■□□□□ 0.18
CCBE1-204ENST00000589419 NUCB2P80303 420 aa16.2■□□□□ 0.18
CCBE1-204ENST00000589419 HMGN5P82970 282 aaKnown RBP16.2■□□□□ 0.18
CCBE1-204ENST00000589419 RBM26Q5T8P6 1007 aaKnown RBP16.2■□□□□ 0.18
CCBE1-204ENST00000589419 RCSD1Q6JBY9 416 aa16.2■□□□□ 0.18
CCBE1-204ENST00000589419 TATDN1Q6P1N9 297 aa16.2■□□□□ 0.18
CCBE1-204ENST00000589419 CATIPQ7Z7H3 387 aa16.2■□□□□ 0.18
CCBE1-204ENST00000589419 SMARCC2Q8TAQ2 1214 aa16.2■□□□□ 0.18
CCBE1-204ENST00000589419 SENP2Q9HC62 589 aa16.2■□□□□ 0.18
CCBE1-204ENST00000589419 ADARB2Q9NS39 739 aaKnown RBP16.2■□□□□ 0.18
CCBE1-204ENST00000589419 PGAP2Q9UHJ9 254 aa16.2■□□□□ 0.18
CCBE1-204ENST00000589419 KIF3AQ9Y496 699 aa16.2■□□□□ 0.18
CCBE1-204ENST00000589419 PPP2R3BQ9Y5P8 575 aa16.2■□□□□ 0.18
CCBE1-204ENST00000589419 IGKV6D-41A0A0C4DH26 115 aa16.19■□□□□ 0.18
CCBE1-204ENST00000589419 CCDC196A0A1B0GTZ2 297 aa16.19■□□□□ 0.18
CCBE1-204ENST00000589419 CDKL5O76039 1030 aa16.19■□□□□ 0.18
CCBE1-204ENST00000589419 CPLX2Q6PUV4 134 aaKnown RBP16.19■□□□□ 0.18
CCBE1-204ENST00000589419 MICU3Q86XE3 530 aa16.19■□□□□ 0.18
CCBE1-204ENST00000589419 TRPM4Q8TD43 1214 aa16.19■□□□□ 0.18
CCBE1-204ENST00000589419 MAP3K14Q99558 947 aa16.19■□□□□ 0.18
CCBE1-204ENST00000589419 IL17RBQ9NRM6 502 aa16.19■□□□□ 0.18
CCBE1-204ENST00000589419 HACL1Q9UJ83 578 aa16.19■□□□□ 0.18
CCBE1-204ENST00000589419 AKR1B1P15121 316 aa16.18■□□□□ 0.18
CCBE1-204ENST00000589419 PDCP20941 246 aa16.18■□□□□ 0.18
CCBE1-204ENST00000589419 GJB2P29033 226 aa16.18■□□□□ 0.18
CCBE1-204ENST00000589419 EPS15P42566 896 aa16.18■□□□□ 0.18
CCBE1-204ENST00000589419 CCT2P78371 535 aaKnown RBP16.18■□□□□ 0.18
CCBE1-204ENST00000589419 MAP3K10Q02779 954 aa16.18■□□□□ 0.18
CCBE1-204ENST00000589419 RASA3Q14644 834 aa16.18■□□□□ 0.18
CCBE1-204ENST00000589419 RTN1Q16799 776 aa16.18■□□□□ 0.18
CCBE1-204ENST00000589419 CERKLQ49MI3 558 aaPredicted RBP16.18■□□□□ 0.18
CCBE1-204ENST00000589419 NSUN7Q8NE18 718 aaKnown RBP16.18■□□□□ 0.18
CCBE1-204ENST00000589419 HOOK2Q96ED9 719 aa16.18■□□□□ 0.18
CCBE1-204ENST00000589419 TMEM39BQ9GZU3 492 aa16.18■□□□□ 0.18
CCBE1-204ENST00000589419 KAT14Q9H8E8 782 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms