RNA–Protein interactions for RNA: ENST00000589235.5

CIRBP-222, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CIRBP, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-222ENST00000589235 ZBTB21Q9ULJ3 1066 aa25.78■■□□□ 1.72
CIRBP-222ENST00000589235 PDE6AP16499 860 aa25.77■■□□□ 1.72
CIRBP-222ENST00000589235 IRX3P78415 501 aaPredicted RBP25.77■■□□□ 1.72
CIRBP-222ENST00000589235 RIOK1Q9BRS2 568 aaKnown RBP25.77■■□□□ 1.72
CIRBP-222ENST00000589235 LRRCC1Q9C099 1032 aa25.77■■□□□ 1.72
CIRBP-222ENST00000589235 POLR3DP05423 398 aaPredicted RBP25.76■■□□□ 1.71
CIRBP-222ENST00000589235 ATP5JP18859 108 aa25.76■■□□□ 1.71
CIRBP-222ENST00000589235 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.76■■□□□ 1.714e-7■■■□□ 16.1
CIRBP-222ENST00000589235 ASCC2Q9H1I8 757 aaPredicted RBP25.76■■□□□ 1.71
CIRBP-222ENST00000589235 PAG1Q9NWQ8 432 aa25.76■■□□□ 1.71
CIRBP-222ENST00000589235 PHIPQ8WWQ0 1821 aa25.75■■□□□ 1.71
CIRBP-222ENST00000589235 ZNF532Q9HCE3 1301 aa25.75■■□□□ 1.71
CIRBP-222ENST00000589235 C20orf194Q5TEA3 1177 aa25.75■■□□□ 1.71
CIRBP-222ENST00000589235 TATDN1Q6P1N9 297 aa25.75■■□□□ 1.71
CIRBP-222ENST00000589235 CABP5Q9NP86 173 aa25.75■■□□□ 1.71
CIRBP-222ENST00000589235 HOXA7P31268 230 aaPredicted RBP25.74■■□□□ 1.71
CIRBP-222ENST00000589235 FLT3LGP49771 235 aa25.74■■□□□ 1.71
CIRBP-222ENST00000589235 IRF5Q13568 498 aa25.74■■□□□ 1.71
CIRBP-222ENST00000589235 CERKLQ49MI3 558 aaPredicted RBP25.74■■□□□ 1.71
CIRBP-222ENST00000589235 PXYLP1Q8TE99 480 aa25.74■■□□□ 1.71
CIRBP-222ENST00000589235 BOLA2Q9H3K6 86 aa25.74■■□□□ 1.71
CIRBP-222ENST00000589235 ADCY3O60266 1144 aa25.73■■□□□ 1.71
CIRBP-222ENST00000589235 GH2P01242 217 aa25.73■■□□□ 1.71
CIRBP-222ENST00000589235 USP17L2Q6R6M4 530 aa25.73■■□□□ 1.71
CIRBP-222ENST00000589235 GABRQQ9UN88 632 aa25.73■■□□□ 1.71
CIRBP-222ENST00000589235 RBBP6Q7Z6E9 1792 aaKnown RBP25.73■■□□□ 1.71
CIRBP-222ENST00000589235 JAG1P78504 1218 aa25.72■■□□□ 1.71
CIRBP-222ENST00000589235 ABCB5Q2M3G0 1257 aa25.72■■□□□ 1.71
CIRBP-222ENST00000589235 GTF3C2Q8WUA4 911 aaPredicted RBP25.72■■□□□ 1.71
CIRBP-222ENST00000589235 RNF208Q9H0X6 261 aa25.72■■□□□ 1.71
CIRBP-222ENST00000589235 MCM9Q9NXL9 1143 aa25.72■■□□□ 1.71
CIRBP-222ENST00000589235 ZSWIM8A7E2V4 1837 aa25.72■■□□□ 1.71
CIRBP-222ENST00000589235 CCL5P13501 91 aa25.71■■□□□ 1.71
CIRBP-222ENST00000589235 USP14P54578 494 aa25.71■■□□□ 1.71
CIRBP-222ENST00000589235 MTFR1Q15390 333 aa25.71■■□□□ 1.71
CIRBP-222ENST00000589235 ZSCAN25Q6NSZ9 544 aa25.71■■□□□ 1.71
CIRBP-222ENST00000589235 GCC1Q96CN9 775 aa25.71■■□□□ 1.71
CIRBP-222ENST00000589235 FEZ1Q99689 392 aa25.71■■□□□ 1.71
CIRBP-222ENST00000589235 HAUS7Q99871 368 aa25.71■■□□□ 1.71
CIRBP-222ENST00000589235 TAOK2Q9UL54 1235 aa25.71■■□□□ 1.71
CIRBP-222ENST00000589235 FOCADQ5VW36 1801 aa25.71■■□□□ 1.71
CIRBP-222ENST00000589235 PTPRFP10586 1907 aa25.71■■□□□ 1.71
CIRBP-222ENST00000589235 GJB1P08034 283 aa25.7■■□□□ 1.7
CIRBP-222ENST00000589235 CAPN2P17655 700 aa25.7■■□□□ 1.7
CIRBP-222ENST00000589235 RAB3GAP1Q15042 981 aa25.7■■□□□ 1.7
CIRBP-222ENST00000589235 MORF4L1Q9UBU8 362 aa25.7■■□□□ 1.7
CIRBP-222ENST00000589235 MYO5AQ9Y4I1 1855 aaKnown RBP25.7■■□□□ 1.7
CIRBP-222ENST00000589235 ATAD5Q96QE3 1844 aa25.7■■□□□ 1.7
CIRBP-222ENST00000589235 TCRBV5S4A2TA0A5A2 114 aa25.69■■□□□ 1.7
CIRBP-222ENST00000589235 PLCD1P51178 756 aa25.69■■□□□ 1.7
CIRBP-222ENST00000589235 AMOTL1Q8IY63 956 aa25.69■■□□□ 1.7
CIRBP-222ENST00000589235 DDRGK1Q96HY6 314 aa25.69■■□□□ 1.7
CIRBP-222ENST00000589235 P2RX7Q99572 595 aaKnown RBP25.69■■□□□ 1.7
CIRBP-222ENST00000589235 SIPA1L1O43166 1804 aa25.68■■□□□ 1.7
CIRBP-222ENST00000589235 PDE4DIPQ5VU43 2346 aa25.68■■□□□ 1.7
CIRBP-222ENST00000589235 ADD2P35612 726 aa25.68■■□□□ 1.7
CIRBP-222ENST00000589235 GJA8P48165 433 aa25.68■■□□□ 1.7
CIRBP-222ENST00000589235 CCAR1Q8IX12 1150 aaKnown RBP25.68■■□□□ 1.7
CIRBP-222ENST00000589235 GPRC5AQ8NFJ5 357 aa25.68■■□□□ 1.7
CIRBP-222ENST00000589235 EDC3Q96F86 508 aaKnown RBP25.68■■□□□ 1.7
CIRBP-222ENST00000589235 GPATCH3Q96I76 525 aa25.68■■□□□ 1.7
CIRBP-222ENST00000589235 ATP8A2Q9NTI2 1148 aa25.68■■□□□ 1.7
CIRBP-222ENST00000589235 LOC285556D6RIA3 1793 aa25.68■■□□□ 1.7
CIRBP-222ENST00000589235 HERVK_113P62684 666 aa25.67■■□□□ 1.7
CIRBP-222ENST00000589235 SHROOM1Q2M3G4 852 aaPredicted RBP25.67■■□□□ 1.7
CIRBP-222ENST00000589235 LCORLQ8N3X6 602 aa25.67■■□□□ 1.7
CIRBP-222ENST00000589235 CDK5RAP2Q96SN8 1893 aa25.67■■□□□ 1.7
CIRBP-222ENST00000589235 EMILIN3Q9NT22 766 aa25.67■■□□□ 1.7
CIRBP-222ENST00000589235 UBE3CQ15386 1083 aa25.66■■□□□ 1.7
CIRBP-222ENST00000589235 SDR42E1Q8WUS8 393 aa25.66■■□□□ 1.7
CIRBP-222ENST00000589235 C12orf42Q96LP6 360 aa25.66■■□□□ 1.7
CIRBP-222ENST00000589235 DCTPP1Q9H773 170 aa25.66■■□□□ 1.7
CIRBP-222ENST00000589235 ARMT1Q9H993 441 aa25.66■■□□□ 1.7
CIRBP-222ENST00000589235 DCP1AQ9NPI6 582 aaPredicted RBP25.66■■□□□ 1.7
CIRBP-222ENST00000589235 ECHDC1Q9NTX5 307 aa25.66■■□□□ 1.7
CIRBP-222ENST00000589235 SWAP70Q9UH65 585 aa25.66■■□□□ 1.7
CIRBP-222ENST00000589235 USP17L15C9J2P7 530 aa25.65■■□□□ 1.7
CIRBP-222ENST00000589235 USP17L13C9JLJ4 530 aa25.65■■□□□ 1.7
CIRBP-222ENST00000589235 USP17L11C9JVI0 530 aa25.65■■□□□ 1.7
CIRBP-222ENST00000589235 USP17L18D6R9N7 530 aa25.65■■□□□ 1.7
CIRBP-222ENST00000589235 USP17L22D6RA61 530 aa25.65■■□□□ 1.7
CIRBP-222ENST00000589235 USP17L17D6RBQ6 530 aa25.65■■□□□ 1.7
CIRBP-222ENST00000589235 USP17L19D6RCP7 530 aa25.65■■□□□ 1.7
CIRBP-222ENST00000589235 USP17L20D6RJB6 530 aa25.65■■□□□ 1.7
CIRBP-222ENST00000589235 INHAP05111 366 aa25.65■■□□□ 1.7
CIRBP-222ENST00000589235 ELNP15502 786 aa25.65■■□□□ 1.7
CIRBP-222ENST00000589235 SHMT1P34896 483 aa25.65■■□□□ 1.7
CIRBP-222ENST00000589235 USP17L24Q0WX57 530 aa25.65■■□□□ 1.7
CIRBP-222ENST00000589235 KIAA1683Q9H0B3 1180 aa25.65■■□□□ 1.7
CIRBP-222ENST00000589235 MPHOSPH10O00566 681 aaKnown RBP25.64■■□□□ 1.7
CIRBP-222ENST00000589235 SMARCA5O60264 1052 aaPredicted RBP25.64■■□□□ 1.7
CIRBP-222ENST00000589235 MBD4O95243 580 aa25.64■■□□□ 1.7
CIRBP-222ENST00000589235 GABPAQ06546 454 aa25.64■■□□□ 1.7
CIRBP-222ENST00000589235 ZYXQ15942 572 aaKnown RBP25.64■■□□□ 1.7
CIRBP-222ENST00000589235 MYH1P12882 1939 aa25.64■■□□□ 1.69
CIRBP-222ENST00000589235 KIAA0100Q14667 2235 aaKnown RBP25.64■■□□□ 1.69
CIRBP-222ENST00000589235 TNRC18O15417 2968 aaPredicted RBP25.64■■□□□ 1.69
CIRBP-222ENST00000589235 HTTP42858 3142 aa25.63■■□□□ 1.69
CIRBP-222ENST00000589235 MAPK4P31152 587 aa25.63■■□□□ 1.69
CIRBP-222ENST00000589235 U2AF1L4Q8WU68 220 aaKnown RBP25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms