RNA–Protein interactions for RNA: ENST00000589000.5

PQLC1-209, Transcript of PQ loop repeat containing 1, human

TSL 4

Gene PQLC1, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PQLC1-209	ENST00000589000	MS4A1	P11836	297 aa		13.97	□□□□□ -0.17
PQLC1-209	ENST00000589000	UNC93B1	Q9H1C4	597 aa		13.97	□□□□□ -0.17
PQLC1-209	ENST00000589000	TLR7	Q9NYK1	1049 aa	Known RBP	13.97	□□□□□ -0.17
PQLC1-209	ENST00000589000	USP17L10	C9JJH3	530 aa		13.96	□□□□□ -0.17
PQLC1-209	ENST00000589000	ELN	P15502	786 aa		13.96	□□□□□ -0.17
PQLC1-209	ENST00000589000	IRX3	P78415	501 aa	Predicted RBP	13.96	□□□□□ -0.17
PQLC1-209	ENST00000589000	MAP3K12	Q12852	859 aa		13.96	□□□□□ -0.17
PQLC1-209	ENST00000589000	MTMR2	Q13614	643 aa		13.96	□□□□□ -0.17
PQLC1-209	ENST00000589000	DIEXF	Q68CQ4	756 aa	Known RBP	13.96	□□□□□ -0.17
PQLC1-209	ENST00000589000	PAK6	Q9NQU5	681 aa	Predicted RBP	13.96	□□□□□ -0.17
PQLC1-209	ENST00000589000	ZBTB21	Q9ULJ3	1066 aa		13.96	□□□□□ -0.17
PQLC1-209	ENST00000589000	PLXNB2	O15031	1838 aa		13.95	□□□□□ -0.18
PQLC1-209	ENST00000589000		H0YGN5	161 aa		13.95	□□□□□ -0.18
PQLC1-209	ENST00000589000	FARP2	O94887	1054 aa	Predicted RBP	13.95	□□□□□ -0.18
PQLC1-209	ENST00000589000	DYNLL1	P63167	89 aa	Known RBP	13.95	□□□□□ -0.18
PQLC1-209	ENST00000589000	MAGEB6	Q8N7X4	407 aa		13.95	□□□□□ -0.18
PQLC1-209	ENST00000589000	GTF3C2	Q8WUA4	911 aa	Predicted RBP	13.95	□□□□□ -0.18
PQLC1-209	ENST00000589000	DPF3	Q92784	378 aa		13.95	□□□□□ -0.18
PQLC1-209	ENST00000589000	EHD4	Q9H223	541 aa		13.95	□□□□□ -0.18
PQLC1-209	ENST00000589000	GJD2	Q9UKL4	321 aa		13.95	□□□□□ -0.18
PQLC1-209	ENST00000589000	COLQ	Q9Y215	455 aa	Predicted RBP	13.95	□□□□□ -0.18
PQLC1-209	ENST00000589000	HMGCR	P04035	888 aa		13.94	□□□□□ -0.18
PQLC1-209	ENST00000589000	USP5	P45974	858 aa		13.94	□□□□□ -0.18
PQLC1-209	ENST00000589000	JAG1	P78504	1218 aa		13.94	□□□□□ -0.18
PQLC1-209	ENST00000589000	TTF1	Q15361	905 aa	Predicted RBP	13.94	□□□□□ -0.18
PQLC1-209	ENST00000589000	TATDN1	Q6P1N9	297 aa		13.94	□□□□□ -0.18
PQLC1-209	ENST00000589000	TTC6	Q86TZ1	520 aa		13.94	□□□□□ -0.18
PQLC1-209	ENST00000589000	AACS	Q86V21	672 aa		13.94	□□□□□ -0.18
PQLC1-209	ENST00000589000	RPAP2	Q8IXW5	612 aa	Predicted RBP	13.94	□□□□□ -0.18
PQLC1-209	ENST00000589000	PANK1	Q8TE04	598 aa		13.94	□□□□□ -0.18
PQLC1-209	ENST00000589000	CRISPLD2	Q9H0B8	497 aa		13.94	□□□□□ -0.18
PQLC1-209	ENST00000589000	SAP30BP	Q9UHR5	308 aa	Known RBP	13.94	□□□□□ -0.18
PQLC1-209	ENST00000589000	SERPINB13	Q9UIV8	391 aa		13.94	□□□□□ -0.18
PQLC1-209	ENST00000589000	EXOC6B	Q9Y2D4	811 aa		13.94	□□□□□ -0.18
PQLC1-209	ENST00000589000	GDF11	O95390	407 aa		13.93	□□□□□ -0.18
PQLC1-209	ENST00000589000	FXR1	P51114	621 aa	Known RBP eCLIP	13.93	□□□□□ -0.18
PQLC1-209	ENST00000589000	HERVK_113	P62684	666 aa		13.93	□□□□□ -0.18
PQLC1-209	ENST00000589000	USP17L2	Q6R6M4	530 aa		13.93	□□□□□ -0.18
PQLC1-209	ENST00000589000	MIGA1	Q8NAN2	632 aa		13.93	□□□□□ -0.18
PQLC1-209	ENST00000589000	GPRC5A	Q8NFJ5	357 aa		13.93	□□□□□ -0.18
PQLC1-209	ENST00000589000	RHPN1	Q8TCX5	695 aa		13.93	□□□□□ -0.18
PQLC1-209	ENST00000589000	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	13.93	□□□□□ -0.18
PQLC1-209	ENST00000589000	KIF1BP	Q96EK5	621 aa		13.93	□□□□□ -0.18
PQLC1-209	ENST00000589000	C12orf42	Q96LP6	360 aa		13.93	□□□□□ -0.18
PQLC1-209	ENST00000589000	DEFB118	Q96PH6	123 aa		13.93	□□□□□ -0.18
PQLC1-209	ENST00000589000	P2RX7	Q99572	595 aa	Known RBP	13.93	□□□□□ -0.18
PQLC1-209	ENST00000589000	ANTXR1	Q9H6X2	564 aa		13.93	□□□□□ -0.18
PQLC1-209	ENST00000589000	TAOK2	Q9UL54	1235 aa		13.93	□□□□□ -0.18
PQLC1-209	ENST00000589000	NR2E3	Q9Y5X4	410 aa		13.93	□□□□□ -0.18
PQLC1-209	ENST00000589000	HMMR	O75330	724 aa		13.92	□□□□□ -0.18
PQLC1-209	ENST00000589000	TFRC	P02786	760 aa	Known RBP	13.92	□□□□□ -0.18
PQLC1-209	ENST00000589000	XRCC5	P13010	732 aa	Known RBP	13.92	□□□□□ -0.18
PQLC1-209	ENST00000589000	CLASRP	Q8N2M8	674 aa	Known RBP	13.92	□□□□□ -0.18
PQLC1-209	ENST00000589000	ANKLE1	Q8NAG6	615 aa		13.92	□□□□□ -0.18
PQLC1-209	ENST00000589000	SOCS4	Q8WXH5	440 aa		13.92	□□□□□ -0.18
PQLC1-209	ENST00000589000	RIOK1	Q9BRS2	568 aa	Known RBP	13.92	□□□□□ -0.18
PQLC1-209	ENST00000589000	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	13.92	□□□□□ -0.18	1e-6	■■■■□ 20.5
PQLC1-209	ENST00000589000	CHMP4B	Q9H444	224 aa	Known RBP	13.92	□□□□□ -0.18
PQLC1-209	ENST00000589000	DDX19B	Q9UMR2	479 aa		13.92	□□□□□ -0.18
PQLC1-209	ENST00000589000	DDX60L	Q5H9U9	1706 aa	Known RBP	13.92	□□□□□ -0.18
PQLC1-209	ENST00000589000	RPTOR	Q8N122	1335 aa		13.91	□□□□□ -0.18
PQLC1-209	ENST00000589000	NAV1	Q8NEY1	1877 aa		13.91	□□□□□ -0.18
PQLC1-209	ENST00000589000	GH2	P01242	217 aa		13.91	□□□□□ -0.18
PQLC1-209	ENST00000589000	MAPK4	P31152	587 aa		13.91	□□□□□ -0.18
PQLC1-209	ENST00000589000	USP14	P54578	494 aa		13.91	□□□□□ -0.18
PQLC1-209	ENST00000589000	SHROOM1	Q2M3G4	852 aa	Predicted RBP	13.91	□□□□□ -0.18
PQLC1-209	ENST00000589000	TRMT44	Q8IYL2	757 aa	Known RBP	13.91	□□□□□ -0.18
PQLC1-209	ENST00000589000	NUDT12	Q9BQG2	462 aa		13.91	□□□□□ -0.18
PQLC1-209	ENST00000589000	TXNRD2	Q9NNW7	524 aa		13.91	□□□□□ -0.18
PQLC1-209	ENST00000589000	HMX1	Q9NP08	348 aa	Predicted RBP	13.91	□□□□□ -0.18
PQLC1-209	ENST00000589000	IL1RAPL2	Q9NP60	686 aa		13.91	□□□□□ -0.18
PQLC1-209	ENST00000589000	EMILIN3	Q9NT22	766 aa		13.91	□□□□□ -0.18
PQLC1-209	ENST00000589000	NDUFB9	Q9Y6M9	179 aa		13.91	□□□□□ -0.18
PQLC1-209	ENST00000589000	RAB11FIP3	O75154	756 aa		13.9	□□□□□ -0.18
PQLC1-209	ENST00000589000	ERVK-9	P63128	1117 aa		13.9	□□□□□ -0.18
PQLC1-209	ENST00000589000	ERVK-24	P63145	666 aa		13.9	□□□□□ -0.18
PQLC1-209	ENST00000589000	CERKL	Q49MI3	558 aa	Predicted RBP	13.9	□□□□□ -0.18
PQLC1-209	ENST00000589000	KIAA1683	Q9H0B3	1180 aa		13.9	□□□□□ -0.18
PQLC1-209	ENST00000589000	ZBTB40	Q9NUA8	1239 aa		13.9	□□□□□ -0.18
PQLC1-209	ENST00000589000	RBPJL	Q9UBG7	517 aa		13.9	□□□□□ -0.18
PQLC1-209	ENST00000589000	MAGEB6P1	A0A0J9YX57	407 aa		13.89	□□□□□ -0.19
PQLC1-209	ENST00000589000	USP17L15	C9J2P7	530 aa		13.89	□□□□□ -0.19
PQLC1-209	ENST00000589000	USP17L13	C9JLJ4	530 aa		13.89	□□□□□ -0.19
PQLC1-209	ENST00000589000	USP17L11	C9JVI0	530 aa		13.89	□□□□□ -0.19
PQLC1-209	ENST00000589000	USP17L18	D6R9N7	530 aa		13.89	□□□□□ -0.19
PQLC1-209	ENST00000589000	USP17L22	D6RA61	530 aa		13.89	□□□□□ -0.19
PQLC1-209	ENST00000589000	USP17L17	D6RBQ6	530 aa		13.89	□□□□□ -0.19
PQLC1-209	ENST00000589000	USP17L19	D6RCP7	530 aa		13.89	□□□□□ -0.19
PQLC1-209	ENST00000589000	USP17L20	D6RJB6	530 aa		13.89	□□□□□ -0.19
PQLC1-209	ENST00000589000	USP17L24	Q0WX57	530 aa		13.89	□□□□□ -0.19
PQLC1-209	ENST00000589000	PDE3A	Q14432	1141 aa		13.89	□□□□□ -0.19
PQLC1-209	ENST00000589000	ABCB5	Q2M3G0	1257 aa		13.89	□□□□□ -0.19
PQLC1-209	ENST00000589000	SLC9C2	Q5TAH2	1124 aa		13.89	□□□□□ -0.19
PQLC1-209	ENST00000589000	MAP3K21	Q5TCX8	1036 aa		13.89	□□□□□ -0.19
PQLC1-209	ENST00000589000	CHRDL2	Q6WN34	429 aa		13.89	□□□□□ -0.19
PQLC1-209	ENST00000589000	NECAB2	Q7Z6G3	386 aa		13.89	□□□□□ -0.19
PQLC1-209	ENST00000589000	TRIB2	Q92519	343 aa		13.89	□□□□□ -0.19
PQLC1-209	ENST00000589000	FEZ1	Q99689	392 aa		13.89	□□□□□ -0.19
PQLC1-209	ENST00000589000	CRNKL1	Q9BZJ0	848 aa	Known RBP	13.89	□□□□□ -0.19
PQLC1-209	ENST00000589000	CABP5	Q9NP86	173 aa		13.89	□□□□□ -0.19

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