RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.25■■□□□ 1.31
CIRBP-220ENST00000588917 CABP5Q9NP86 173 aa23.25■■□□□ 1.31
CIRBP-220ENST00000588917 PICK1Q9NRD5 415 aa23.25■■□□□ 1.31
CIRBP-220ENST00000588917 NAV1Q8NEY1 1877 aa23.25■■□□□ 1.31
CIRBP-220ENST00000588917 FAM196BA6NMK8 535 aa23.24■■□□□ 1.31
CIRBP-220ENST00000588917 ASNSP08243 561 aa23.24■■□□□ 1.31
CIRBP-220ENST00000588917 INPP5BP32019 993 aa23.24■■□□□ 1.31
CIRBP-220ENST00000588917 SHMT1P34896 483 aa23.24■■□□□ 1.31
CIRBP-220ENST00000588917 ZNF157P51786 506 aaPredicted RBP23.24■■□□□ 1.31
CIRBP-220ENST00000588917 SCYL3Q8IZE3 742 aa23.24■■□□□ 1.31
CIRBP-220ENST00000588917 ZNF444Q8N0Y2 327 aaPredicted RBP23.24■■□□□ 1.31
CIRBP-220ENST00000588917 ZKSCAN4Q969J2 545 aaPredicted RBP23.24■■□□□ 1.31
CIRBP-220ENST00000588917 DYNLL2Q96FJ2 89 aa23.24■■□□□ 1.31
CIRBP-220ENST00000588917 ZIC5Q96T25 663 aa23.24■■□□□ 1.31
CIRBP-220ENST00000588917 LSG1Q9H089 658 aaKnown RBP23.24■■□□□ 1.31
CIRBP-220ENST00000588917 RNF41Q9H4P4 317 aaPredicted RBP23.24■■□□□ 1.31
CIRBP-220ENST00000588917 DNAJC18Q9H819 358 aa23.24■■□□□ 1.31
CIRBP-220ENST00000588917 ROBO3Q96MS0 1386 aa23.24■■□□□ 1.31
CIRBP-220ENST00000588917 VGLL4Q14135 290 aa23.23■■□□□ 1.31
CIRBP-220ENST00000588917 TBC1D2Q9BYX2 928 aa23.23■■□□□ 1.31
CIRBP-220ENST00000588917 FAM155AB1AL88 458 aaPredicted RBP23.22■■□□□ 1.31
CIRBP-220ENST00000588917 ABCB5Q2M3G0 1257 aa23.22■■□□□ 1.31
CIRBP-220ENST00000588917 MFSD6Q6ZSS7 791 aa23.22■■□□□ 1.31
CIRBP-220ENST00000588917 ERO1BQ86YB8 467 aa23.22■■□□□ 1.31
CIRBP-220ENST00000588917 DDX60LQ5H9U9 1706 aaKnown RBP23.22■■□□□ 1.31
CIRBP-220ENST00000588917 CCDC85CA6NKD9 419 aa23.21■■□□□ 1.31
CIRBP-220ENST00000588917 SLURP2P0DP57 97 aa23.21■■□□□ 1.31
CIRBP-220ENST00000588917 CTDSPL2Q05D32 466 aa23.21■■□□□ 1.31
CIRBP-220ENST00000588917 PPATQ06203 517 aa23.21■■□□□ 1.31
CIRBP-220ENST00000588917 AKNAD1Q5T1N1 836 aa23.21■■□□□ 1.31
CIRBP-220ENST00000588917 RNF20Q5VTR2 975 aa23.21■■□□□ 1.31
CIRBP-220ENST00000588917 RBM8AQ9Y5S9 174 aaKnown RBP23.21■■□□□ 1.31
CIRBP-220ENST00000588917 FGRP09769 529 aa23.2■■□□□ 1.3
CIRBP-220ENST00000588917 EVX2Q03828 476 aa23.2■■□□□ 1.3
CIRBP-220ENST00000588917 CLMNQ96JQ2 1002 aa23.2■■□□□ 1.3
CIRBP-220ENST00000588917 ELP3Q9H9T3 547 aa23.2■■□□□ 1.3
CIRBP-220ENST00000588917 SNCAIPQ9Y6H5 919 aa23.2■■□□□ 1.3
CIRBP-220ENST00000588917 BAZ2AQ9UIF9 1905 aaKnown RBP23.2■■□□□ 1.3
CIRBP-220ENST00000588917 ZBTB48P10074 688 aaPredicted RBP23.19■■□□□ 1.3
CIRBP-220ENST00000588917 HAND2P61296 217 aa23.19■■□□□ 1.3
CIRBP-220ENST00000588917 STK11IPQ8N1F8 1099 aa23.19■■□□□ 1.3
CIRBP-220ENST00000588917 SLC44A5Q8NCS7 719 aa23.19■■□□□ 1.3
CIRBP-220ENST00000588917 STAG1Q8WVM7 1258 aa23.19■■□□□ 1.3
CIRBP-220ENST00000588917 CNNM2Q9H8M5 875 aa23.19■■□□□ 1.3
CIRBP-220ENST00000588917 AS3MTQ9HBK9 375 aa23.19■■□□□ 1.3
CIRBP-220ENST00000588917 SPDYE5A6NIY4 337 aa23.18■■□□□ 1.3
CIRBP-220ENST00000588917 USP17L5A8MUK1 530 aa23.18■■□□□ 1.3
CIRBP-220ENST00000588917 SMIM22K7EJ46 135 aa23.18■■□□□ 1.3
CIRBP-220ENST00000588917 MPHOSPH10O00566 681 aaKnown RBP23.18■■□□□ 1.3
CIRBP-220ENST00000588917 ORC4O43929 436 aa23.18■■□□□ 1.3
CIRBP-220ENST00000588917 PTPRAP18433 802 aa23.18■■□□□ 1.3
CIRBP-220ENST00000588917 KIF23Q02241 960 aaPredicted RBP23.18■■□□□ 1.3
CIRBP-220ENST00000588917 TRDNQ13061 729 aa23.18■■□□□ 1.3
CIRBP-220ENST00000588917 NECTIN1Q15223 517 aa23.18■■□□□ 1.3
CIRBP-220ENST00000588917 TMEM179Q6ZVK1 233 aa23.18■■□□□ 1.3
CIRBP-220ENST00000588917 MCOLN1Q9GZU1 580 aa23.18■■□□□ 1.3
CIRBP-220ENST00000588917 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.18■■□□□ 1.3
CIRBP-220ENST00000588917 GDF11O95390 407 aa23.17■■□□□ 1.3
CIRBP-220ENST00000588917 GH2P01242 217 aa23.17■■□□□ 1.3
CIRBP-220ENST00000588917 RASA1P20936 1047 aa23.17■■□□□ 1.3
CIRBP-220ENST00000588917 RRP1BQ14684 758 aaKnown RBP23.17■■□□□ 1.3
CIRBP-220ENST00000588917 PPP4R3BQ5MIZ7 849 aa23.17■■□□□ 1.3
CIRBP-220ENST00000588917 OPTNQ96CV9 577 aa23.17■■□□□ 1.3
CIRBP-220ENST00000588917 KRT23Q9C075 422 aa23.17■■□□□ 1.3
CIRBP-220ENST00000588917 TOMM22Q9NS69 142 aa23.17■■□□□ 1.3
CIRBP-220ENST00000588917 SAGE1Q9NXZ1 904 aa23.17■■□□□ 1.3
CIRBP-220ENST00000588917 ZBTB21Q9ULJ3 1066 aa23.17■■□□□ 1.3
CIRBP-220ENST00000588917 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.17■■□□□ 1.3
CIRBP-220ENST00000588917 CYP21A2P08686 494 aa23.16■■□□□ 1.3
CIRBP-220ENST00000588917 SLC10A3P09131 477 aa23.16■■□□□ 1.3
CIRBP-220ENST00000588917 TSPY3P0CV98 308 aa23.16■■□□□ 1.3
CIRBP-220ENST00000588917 TSPY8P0CW00 308 aa23.16■■□□□ 1.3
CIRBP-220ENST00000588917 PPIL2Q13356 520 aa23.16■■□□□ 1.3
CIRBP-220ENST00000588917 SPRYD7Q5W111 196 aa23.16■■□□□ 1.3
CIRBP-220ENST00000588917 REM2Q8IYK8 340 aaPredicted RBP23.16■■□□□ 1.3
CIRBP-220ENST00000588917 ESR2Q92731 530 aa23.16■■□□□ 1.3
CIRBP-220ENST00000588917 WNK4Q96J92 1243 aa23.16■■□□□ 1.3
CIRBP-220ENST00000588917 ZHX2Q9Y6X8 837 aa23.16■■□□□ 1.3
CIRBP-220ENST00000588917 SIPA1L1O43166 1804 aa23.15■■□□□ 1.3
CIRBP-220ENST00000588917 RANBP6O60518 1105 aaKnown RBP23.15■■□□□ 1.3
CIRBP-220ENST00000588917 PRDM1O75626 825 aa23.15■■□□□ 1.3
CIRBP-220ENST00000588917 ZKSCAN1P17029 563 aaPredicted RBP23.15■■□□□ 1.3
CIRBP-220ENST00000588917 INHBEP58166 350 aa23.15■■□□□ 1.3
CIRBP-220ENST00000588917 TFAP4Q01664 338 aa23.15■■□□□ 1.3
CIRBP-220ENST00000588917 RAB3GAP1Q15042 981 aa23.15■■□□□ 1.3
CIRBP-220ENST00000588917 RASAL3Q86YV0 1011 aa23.15■■□□□ 1.3
CIRBP-220ENST00000588917 WDR18Q9BV38 432 aa23.15■■□□□ 1.3
CIRBP-220ENST00000588917 KANSL2Q9H9L4 492 aa23.15■■□□□ 1.3
CIRBP-220ENST00000588917 TSPY2A6NKD2 308 aa23.14■■□□□ 1.29
CIRBP-220ENST00000588917 CXCL11O14625 94 aa23.14■■□□□ 1.29
CIRBP-220ENST00000588917 AKR1B1P15121 316 aa23.14■■□□□ 1.29
CIRBP-220ENST00000588917 MCCP23508 829 aa23.14■■□□□ 1.29
CIRBP-220ENST00000588917 DGKZQ13574 1117 aa23.14■■□□□ 1.29
CIRBP-220ENST00000588917 CREB3L3Q68CJ9 461 aa23.14■■□□□ 1.29
CIRBP-220ENST00000588917 NEDD1Q8NHV4 660 aa23.14■■□□□ 1.29
CIRBP-220ENST00000588917 OTUD5Q96G74 571 aa23.14■■□□□ 1.29
CIRBP-220ENST00000588917 SLC27A2O14975 620 aa23.13■■□□□ 1.29
CIRBP-220ENST00000588917 RGS19P49795 217 aa23.13■■□□□ 1.29
CIRBP-220ENST00000588917 GTF2A2P52657 109 aa23.13■■□□□ 1.29
CIRBP-220ENST00000588917 KRT32Q14532 448 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms