RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 ARMT1Q9H993 441 aa13.98□□□□□ -0.17
RFX1-204ENST00000588885 RBBP6Q7Z6E9 1792 aaKnown RBP13.98□□□□□ -0.17
RFX1-204ENST00000588885 TCRBV5S4A2TA0A5A2 114 aa13.97□□□□□ -0.17
RFX1-204ENST00000588885 MYCP01106 439 aaPredicted RBP13.97□□□□□ -0.17
RFX1-204ENST00000588885 POLR3DP05423 398 aaPredicted RBP13.97□□□□□ -0.17
RFX1-204ENST00000588885 CTGFP29279 349 aa13.97□□□□□ -0.17
RFX1-204ENST00000588885 PSMC4P43686 418 aa13.97□□□□□ -0.17
RFX1-204ENST00000588885 LCORLQ8N3X6 602 aa13.97□□□□□ -0.17
RFX1-204ENST00000588885 CRNKL1Q9BZJ0 848 aaKnown RBP13.97□□□□□ -0.17
RFX1-204ENST00000588885 COL2A1P02458 1487 aaPredicted RBP13.97□□□□□ -0.17
RFX1-204ENST00000588885 PRKAB2O43741 272 aa13.96□□□□□ -0.17
RFX1-204ENST00000588885 FMNL1O95466 1100 aaPredicted RBP13.96□□□□□ -0.17
RFX1-204ENST00000588885 PLCD1P51178 756 aa13.96□□□□□ -0.17
RFX1-204ENST00000588885 METTL16Q86W50 562 aaKnown RBP13.96□□□□□ -0.17
RFX1-204ENST00000588885 CERS3Q8IU89 383 aa13.96□□□□□ -0.17
RFX1-204ENST00000588885 SDR42E1Q8WUS8 393 aa13.96□□□□□ -0.17
RFX1-204ENST00000588885 ECHDC1Q9NTX5 307 aa13.96□□□□□ -0.17
RFX1-204ENST00000588885 MCM9Q9NXL9 1143 aa13.96□□□□□ -0.17
RFX1-204ENST00000588885 PTCH2Q9Y6C5 1203 aa13.96□□□□□ -0.17
RFX1-204ENST00000588885 ZSWIM8A7E2V4 1837 aa13.96□□□□□ -0.17
RFX1-204ENST00000588885 MGAMO43451 1857 aa13.95□□□□□ -0.18
RFX1-204ENST00000588885 ADGRA2Q96PE1 1338 aa13.95□□□□□ -0.18
RFX1-204ENST00000588885 MBD4O95243 580 aa13.95□□□□□ -0.18
RFX1-204ENST00000588885 GH2P01242 217 aa13.95□□□□□ -0.18
RFX1-204ENST00000588885 ASNSP08243 561 aa13.95□□□□□ -0.18
RFX1-204ENST00000588885 CYP2D6P10635 497 aa13.95□□□□□ -0.18
RFX1-204ENST00000588885 ADD2P35612 726 aa13.95□□□□□ -0.18
RFX1-204ENST00000588885 MTMR2Q13614 643 aa13.95□□□□□ -0.18
RFX1-204ENST00000588885 TMED8Q6PL24 325 aaPredicted RBP13.95□□□□□ -0.18
RFX1-204ENST00000588885 TTC6Q86TZ1 520 aa13.95□□□□□ -0.18
RFX1-204ENST00000588885 SMCR8Q8TEV9 937 aaPredicted RBP13.95□□□□□ -0.18
RFX1-204ENST00000588885 CCDC136Q96JN2 1154 aa13.95□□□□□ -0.18
RFX1-204ENST00000588885 TRIM47Q96LD4 638 aa13.95□□□□□ -0.18
RFX1-204ENST00000588885 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.95□□□□□ -0.18
RFX1-204ENST00000588885 AS3MTQ9HBK9 375 aa13.95□□□□□ -0.18
RFX1-204ENST00000588885 SERPINB13Q9UIV8 391 aa13.95□□□□□ -0.18
RFX1-204ENST00000588885 AGTPBP1Q9UPW5 1226 aa13.95□□□□□ -0.18
RFX1-204ENST00000588885 DOCK1Q14185 1865 aa13.95□□□□□ -0.18
RFX1-204ENST00000588885 ATAD5Q96QE3 1844 aa13.94□□□□□ -0.18
RFX1-204ENST00000588885 BCRP11274 1271 aa13.94□□□□□ -0.18
RFX1-204ENST00000588885 AAMPQ13685 434 aa13.94□□□□□ -0.18
RFX1-204ENST00000588885 OTUD7AQ8TE49 926 aaPredicted RBP13.94□□□□□ -0.18
RFX1-204ENST00000588885 TMEM106CQ9BVX2 250 aa13.94□□□□□ -0.18
RFX1-204ENST00000588885 ZBTB21Q9ULJ3 1066 aa13.94□□□□□ -0.18
RFX1-204ENST00000588885 MYO5AQ9Y4I1 1855 aaKnown RBP13.93□□□□□ -0.18
RFX1-204ENST00000588885 OSBPP22059 807 aa13.93□□□□□ -0.18
RFX1-204ENST00000588885 BACE1P56817 501 aa13.93□□□□□ -0.18
RFX1-204ENST00000588885 RAB3GAP1Q15042 981 aa13.93□□□□□ -0.18
RFX1-204ENST00000588885 CERKLQ49MI3 558 aaPredicted RBP13.93□□□□□ -0.18
RFX1-204ENST00000588885 SLC9C1Q4G0N8 1177 aa13.93□□□□□ -0.18
RFX1-204ENST00000588885 PRPF38BQ5VTL8 546 aaKnown RBP13.93□□□□□ -0.18
RFX1-204ENST00000588885 NBPF11Q86T75 865 aa13.93□□□□□ -0.18
RFX1-204ENST00000588885 ANKRD13CQ8N6S4 541 aa13.93□□□□□ -0.18
RFX1-204ENST00000588885 SH3TC2Q8TF17 1288 aa13.93□□□□□ -0.18
RFX1-204ENST00000588885 GPATCH3Q96I76 525 aa13.93□□□□□ -0.18
RFX1-204ENST00000588885 WDR18Q9BV38 432 aa13.93□□□□□ -0.18
RFX1-204ENST00000588885 DCP1AQ9NPI6 582 aaPredicted RBP13.93□□□□□ -0.18
RFX1-204ENST00000588885 TMOD4Q9NZQ9 345 aa13.93□□□□□ -0.18
RFX1-204ENST00000588885 SLC45A1Q9Y2W3 748 aa13.93□□□□□ -0.18
RFX1-204ENST00000588885 PTPRFP10586 1907 aa13.92□□□□□ -0.18
RFX1-204ENST00000588885 MKI67P46013 3256 aaKnown RBP13.92□□□□□ -0.18
RFX1-204ENST00000588885 CYP2D7A0A087X1C5 515 aa13.92□□□□□ -0.18
RFX1-204ENST00000588885 POTEFA5A3E0 1075 aa13.92□□□□□ -0.18
RFX1-204ENST00000588885 SHMT1P34896 483 aa13.92□□□□□ -0.18
RFX1-204ENST00000588885 UBE3CQ15386 1083 aa13.92□□□□□ -0.18
RFX1-204ENST00000588885 ZYXQ15942 572 aaKnown RBP13.92□□□□□ -0.18
RFX1-204ENST00000588885 ABCB5Q2M3G0 1257 aa13.92□□□□□ -0.18
RFX1-204ENST00000588885 TATDN1Q6P1N9 297 aa13.92□□□□□ -0.18
RFX1-204ENST00000588885 PROCA1Q8NCQ7 364 aaPredicted RBP13.92□□□□□ -0.18
RFX1-204ENST00000588885 DYNLL2Q96FJ2 89 aa13.92□□□□□ -0.18
RFX1-204ENST00000588885 TBC1D2Q9BYX2 928 aa13.92□□□□□ -0.18
RFX1-204ENST00000588885 PUS7LQ9H0K6 701 aaKnown RBP13.92□□□□□ -0.18
RFX1-204ENST00000588885 ASCC2Q9H1I8 757 aaPredicted RBP13.92□□□□□ -0.18
RFX1-204ENST00000588885 EHD4Q9H223 541 aa13.92□□□□□ -0.18
RFX1-204ENST00000588885 BRCA2P51587 3418 aa13.92□□□□□ -0.18
RFX1-204ENST00000588885 USP17L10C9JJH3 530 aa13.91□□□□□ -0.18
RFX1-204ENST00000588885 SMIM22K7EJ46 135 aa13.91□□□□□ -0.18
RFX1-204ENST00000588885 MPHOSPH10O00566 681 aaKnown RBP13.91□□□□□ -0.18
RFX1-204ENST00000588885 PEX10O60683 326 aa13.91□□□□□ -0.18
RFX1-204ENST00000588885 HOXD10P28358 340 aa13.91□□□□□ -0.18
RFX1-204ENST00000588885 FCGRTP55899 365 aa13.91□□□□□ -0.18
RFX1-204ENST00000588885 SH3D19Q5HYK7 790 aa13.91□□□□□ -0.18
RFX1-204ENST00000588885 ANKRD45Q5TZF3 282 aa13.91□□□□□ -0.18
RFX1-204ENST00000588885 ZSCAN25Q6NSZ9 544 aa13.91□□□□□ -0.18
RFX1-204ENST00000588885 SLC44A5Q8NCS7 719 aa13.91□□□□□ -0.18
RFX1-204ENST00000588885 RAET1EQ8TD07 263 aa13.91□□□□□ -0.18
RFX1-204ENST00000588885 ARMC5Q96C12 935 aa13.91□□□□□ -0.18
RFX1-204ENST00000588885 SRRDQ9UH36 339 aa13.91□□□□□ -0.18
RFX1-204ENST00000588885 PNMA3Q9UL41 463 aa13.91□□□□□ -0.18
RFX1-204ENST00000588885 SLC4A4Q9Y6R1 1079 aa13.91□□□□□ -0.18
RFX1-204ENST00000588885 MAST2Q6P0Q8 1798 aa13.91□□□□□ -0.18
RFX1-204ENST00000588885 GNRH1P01148 92 aa13.9□□□□□ -0.18
RFX1-204ENST00000588885 IRX3P78415 501 aaPredicted RBP13.9□□□□□ -0.18
RFX1-204ENST00000588885 PRKCZQ05513 592 aa13.9□□□□□ -0.18
RFX1-204ENST00000588885 PABPC4Q13310 644 aaKnown RBP eCLIP13.9□□□□□ -0.18
RFX1-204ENST00000588885 SPDYE1Q8NFV5 336 aaPredicted RBP13.9□□□□□ -0.18
RFX1-204ENST00000588885 ACER1Q8TDN7 264 aa13.9□□□□□ -0.18
RFX1-204ENST00000588885 ZNF333Q96JL9 665 aa13.9□□□□□ -0.18
RFX1-204ENST00000588885 P2RX7Q99572 595 aaKnown RBP13.9□□□□□ -0.18
RFX1-204ENST00000588885 FEZ1Q99689 392 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms