RNA–Protein interactions for RNA: ENST00000588656.1

CHUK-203, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

TSL 3

Gene CHUK, Length 675 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-203ENST00000588656 KIAA0825Q8IV33 1275 aa7.18□□□□□ -1.26
CHUK-203ENST00000588656 RNF217Q8TC41 542 aa7.18□□□□□ -1.26
CHUK-203ENST00000588656 TSR2Q969E8 191 aaKnown RBP7.18□□□□□ -1.26
CHUK-203ENST00000588656 HMX1Q9NP08 348 aaPredicted RBP7.18□□□□□ -1.26
CHUK-203ENST00000588656 CWC25Q9NXE8 425 aaPredicted RBP7.18□□□□□ -1.26
CHUK-203ENST00000588656 PODXL2Q9NZ53 605 aa7.18□□□□□ -1.26
CHUK-203ENST00000588656 MAP3K2Q9Y2U5 619 aa7.18□□□□□ -1.26
CHUK-203ENST00000588656 XDHP47989 1333 aa7.18□□□□□ -1.26
CHUK-203ENST00000588656 AOX1Q06278 1338 aa7.18□□□□□ -1.26
CHUK-203ENST00000588656 MYBBP1AQ9BQG0 1328 aaKnown RBP7.18□□□□□ -1.26
CHUK-203ENST00000588656 SSC5DA1L4H1 1573 aa7.17□□□□□ -1.26
CHUK-203ENST00000588656 WNT10BO00744 389 aa7.17□□□□□ -1.26
CHUK-203ENST00000588656 MYCP01106 439 aaPredicted RBP7.17□□□□□ -1.26
CHUK-203ENST00000588656 PCCAP05165 728 aaPredicted RBP7.17□□□□□ -1.26
CHUK-203ENST00000588656 IGKV5-2P06315 115 aa7.17□□□□□ -1.26
CHUK-203ENST00000588656 SLURP2P0DP57 97 aa7.17□□□□□ -1.26
CHUK-203ENST00000588656 PTPN12Q05209 780 aaKnown RBP7.17□□□□□ -1.26
CHUK-203ENST00000588656 RALBP1Q15311 655 aa7.17□□□□□ -1.26
CHUK-203ENST00000588656 G2E3Q7L622 706 aa7.17□□□□□ -1.26
CHUK-203ENST00000588656 UBE3BQ7Z3V4 1068 aa7.17□□□□□ -1.26
CHUK-203ENST00000588656 HOMEZQ8IX15 550 aa7.17□□□□□ -1.26
CHUK-203ENST00000588656 TMEM151AQ8N4L1 468 aa7.17□□□□□ -1.26
CHUK-203ENST00000588656 AGBL3Q8NEM8 1001 aa7.17□□□□□ -1.26
CHUK-203ENST00000588656 CLMNQ96JQ2 1002 aa7.17□□□□□ -1.26
CHUK-203ENST00000588656 GMLQ99445 158 aa7.17□□□□□ -1.26
CHUK-203ENST00000588656 METTL22Q9BUU2 404 aaPredicted RBP7.17□□□□□ -1.26
CHUK-203ENST00000588656 BABAM1Q9NWV8 329 aa7.17□□□□□ -1.26
CHUK-203ENST00000588656 ANGEL1Q9UNK9 670 aaKnown RBP7.17□□□□□ -1.26
CHUK-203ENST00000588656 MINPP1Q9UNW1 487 aa7.17□□□□□ -1.26
CHUK-203ENST00000588656 CLRN2A0PK11 232 aa7.16□□□□□ -1.26
CHUK-203ENST00000588656 PI4KAP2A4QPH2 592 aa7.16□□□□□ -1.26
CHUK-203ENST00000588656 GPR25O00155 361 aa7.16□□□□□ -1.26
CHUK-203ENST00000588656 TAF5LO75529 589 aa7.16□□□□□ -1.26
CHUK-203ENST00000588656 ATP2B4P23634 1241 aa7.16□□□□□ -1.26
CHUK-203ENST00000588656 GSK3AP49840 483 aa7.16□□□□□ -1.26
CHUK-203ENST00000588656 CCT4P50991 539 aaKnown RBP7.16□□□□□ -1.26
CHUK-203ENST00000588656 GTF2IP78347 998 aa7.16□□□□□ -1.26
CHUK-203ENST00000588656 RNFT1Q5M7Z0 435 aa7.16□□□□□ -1.26
CHUK-203ENST00000588656 DACT2Q5SW24 774 aa7.16□□□□□ -1.26
CHUK-203ENST00000588656 LYSMD3Q7Z3D4 306 aa7.16□□□□□ -1.26
CHUK-203ENST00000588656 SVOPQ8N4V2 548 aa7.16□□□□□ -1.26
CHUK-203ENST00000588656 PI4KAP1Q8N8J0 262 aa7.16□□□□□ -1.26
CHUK-203ENST00000588656 CCDC191Q8NCU4 936 aa7.16□□□□□ -1.26
CHUK-203ENST00000588656 PCMTD1Q96MG8 357 aaPredicted RBP7.16□□□□□ -1.26
CHUK-203ENST00000588656 MED23Q9ULK4 1368 aa7.16□□□□□ -1.26
CHUK-203ENST00000588656 CEP290O15078 2479 aa7.16□□□□□ -1.26
CHUK-203ENST00000588656 PLIN1O60240 522 aa7.15□□□□□ -1.26
CHUK-203ENST00000588656 GDF11O95390 407 aa7.15□□□□□ -1.26
CHUK-203ENST00000588656 ZNF853P0CG23 659 aa7.15□□□□□ -1.26
CHUK-203ENST00000588656 RNF144AP50876 292 aaPredicted RBP7.15□□□□□ -1.26
CHUK-203ENST00000588656 CAP1Q01518 475 aa7.15□□□□□ -1.26
CHUK-203ENST00000588656 ZNF385CQ66K41 422 aaPredicted RBP7.15□□□□□ -1.26
CHUK-203ENST00000588656 KDF1Q8NAX2 398 aaPredicted RBP7.15□□□□□ -1.26
CHUK-203ENST00000588656 TTLL11Q8NHH1 800 aa7.15□□□□□ -1.26
CHUK-203ENST00000588656 CD99L2Q8TCZ2 262 aa7.15□□□□□ -1.26
CHUK-203ENST00000588656 CDC5LQ99459 802 aaKnown RBP7.15□□□□□ -1.26
CHUK-203ENST00000588656 VEZTQ9HBM0 779 aa7.15□□□□□ -1.26
CHUK-203ENST00000588656 CHMP3Q9Y3E7 222 aa7.15□□□□□ -1.26
CHUK-203ENST00000588656 TRIM17Q9Y577 477 aa7.15□□□□□ -1.26
CHUK-203ENST00000588656 PITPNM2Q9BZ72 1349 aa7.15□□□□□ -1.26
CHUK-203ENST00000588656 ZNF609O15014 1411 aa7.15□□□□□ -1.27
CHUK-203ENST00000588656 ZNF804BA4D1E1 1349 aa7.14□□□□□ -1.27
CHUK-203ENST00000588656 NEURL1BA8MQ27 555 aa7.14□□□□□ -1.27
CHUK-203ENST00000588656 ZBBXA8MT70 800 aa7.14□□□□□ -1.27
CHUK-203ENST00000588656 IGF2BP3O00425 579 aaKnown RBP eCLIP7.14□□□□□ -1.27
CHUK-203ENST00000588656 MGAMO43451 1857 aa7.14□□□□□ -1.27
CHUK-203ENST00000588656 FKTNO75072 461 aa7.14□□□□□ -1.27
CHUK-203ENST00000588656 HOXB7P09629 217 aa7.14□□□□□ -1.27
CHUK-203ENST00000588656 NF2P35240 595 aa7.14□□□□□ -1.27
CHUK-203ENST00000588656 KCNJ4P48050 445 aa7.14□□□□□ -1.27
CHUK-203ENST00000588656 TRIM28Q13263 835 aaKnown RBP7.14□□□□□ -1.27
CHUK-203ENST00000588656 CCDC184Q52MB2 194 aa7.14□□□□□ -1.27
CHUK-203ENST00000588656 TTLL5Q6EMB2 1281 aa7.14□□□□□ -1.27
CHUK-203ENST00000588656 PODNQ7Z5L7 613 aa7.14□□□□□ -1.27
CHUK-203ENST00000588656 OGFOD1Q8N543 542 aa7.14□□□□□ -1.27
CHUK-203ENST00000588656 CERS5Q8N5B7 392 aa7.14□□□□□ -1.27
CHUK-203ENST00000588656 GMCL1Q96IK5 515 aa7.14□□□□□ -1.27
CHUK-203ENST00000588656 IFT57Q9NWB7 429 aa7.14□□□□□ -1.27
CHUK-203ENST00000588656 DDX58O95786 925 aaKnown RBP7.13□□□□□ -1.27
CHUK-203ENST00000588656 IGHMBP2P38935 993 aaKnown RBP7.13□□□□□ -1.27
CHUK-203ENST00000588656 TM4SF4P48230 202 aa7.13□□□□□ -1.27
CHUK-203ENST00000588656 RBM5P52756 815 aaKnown RBP eCLIP7.13□□□□□ -1.27
CHUK-203ENST00000588656 MCCD1P59942 119 aaPredicted RBP7.13□□□□□ -1.27
CHUK-203ENST00000588656 GNAI1P63096 354 aa7.13□□□□□ -1.27
CHUK-203ENST00000588656 FKBP1BP68106 108 aa7.13□□□□□ -1.27
CHUK-203ENST00000588656 CHRNDQ07001 517 aa7.13□□□□□ -1.27
CHUK-203ENST00000588656 FOXD4L5Q5VV16 416 aaPredicted RBP7.13□□□□□ -1.27
CHUK-203ENST00000588656 CCDC30Q5VVM6 783 aa7.13□□□□□ -1.27
CHUK-203ENST00000588656 FBXO46Q6PJ61 603 aaPredicted RBP7.13□□□□□ -1.27
CHUK-203ENST00000588656 ARMC9Q7Z3E5 817 aa7.13□□□□□ -1.27
CHUK-203ENST00000588656 KCTD17Q8N5Z5 321 aa7.13□□□□□ -1.27
CHUK-203ENST00000588656 ZNF594Q96JF6 807 aaPredicted RBP7.13□□□□□ -1.27
CHUK-203ENST00000588656 TRIM34Q9BYJ4 488 aa7.13□□□□□ -1.27
CHUK-203ENST00000588656 BSDC1Q9NW68 430 aaPredicted RBP7.13□□□□□ -1.27
CHUK-203ENST00000588656 F6X3S4 739 aa7.12□□□□□ -1.27
CHUK-203ENST00000588656 EN2P19622 333 aaPredicted RBP7.12□□□□□ -1.27
CHUK-203ENST00000588656 GPC1P35052 558 aa7.12□□□□□ -1.27
CHUK-203ENST00000588656 MARSP56192 900 aaKnown RBP7.12□□□□□ -1.27
CHUK-203ENST00000588656 SRSF11Q05519 484 aaKnown RBP7.12□□□□□ -1.27
CHUK-203ENST00000588656 NEXNQ0ZGT2 675 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms