RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 PTPN18Q99952 460 aa24.19■■□□□ 1.46
DDX39A-207ENST00000588542 AFG3L2Q9Y4W6 797 aa24.19■■□□□ 1.46
DDX39A-207ENST00000588542 ZHX2Q9Y6X8 837 aa24.19■■□□□ 1.46
DDX39A-207ENST00000588542 HIP1O00291 1037 aa24.18■■□□□ 1.46
DDX39A-207ENST00000588542 IGF2BP3O00425 579 aaKnown RBP eCLIP24.18■■□□□ 1.46
DDX39A-207ENST00000588542 APPP05067 770 aa24.18■■□□□ 1.46
DDX39A-207ENST00000588542 BRI3BPQ8WY22 251 aa24.18■■□□□ 1.46
DDX39A-207ENST00000588542 DIAPH3Q9NSV4 1193 aa24.18■■□□□ 1.46
DDX39A-207ENST00000588542 RNF186Q9NXI6 227 aa24.18■■□□□ 1.46
DDX39A-207ENST00000588542 TDO2P48775 406 aa24.17■■□□□ 1.46
DDX39A-207ENST00000588542 SNAPC2Q13487 334 aa24.17■■□□□ 1.46
DDX39A-207ENST00000588542 CWC27Q6UX04 472 aaKnown RBP24.17■■□□□ 1.46
DDX39A-207ENST00000588542 C16orf86Q6ZW13 317 aa24.17■■□□□ 1.46
DDX39A-207ENST00000588542 AMOTL1Q8IY63 956 aa24.17■■□□□ 1.46
DDX39A-207ENST00000588542 BEGAINQ9BUH8 593 aa24.17■■□□□ 1.46
DDX39A-207ENST00000588542 SWAP70Q9UH65 585 aa24.17■■□□□ 1.46
DDX39A-207ENST00000588542 TAOK2Q9UL54 1235 aa24.17■■□□□ 1.46
DDX39A-207ENST00000588542 ZBTB21Q9ULJ3 1066 aa24.17■■□□□ 1.46
DDX39A-207ENST00000588542 ROBO3Q96MS0 1386 aa24.16■■□□□ 1.46
DDX39A-207ENST00000588542 CCDC171Q6TFL3 1326 aa24.16■■□□□ 1.46
DDX39A-207ENST00000588542 CCL15-CCL14A0A0B4J2E2 113 aa24.16■■□□□ 1.46
DDX39A-207ENST00000588542 ASNSP08243 561 aa24.16■■□□□ 1.46
DDX39A-207ENST00000588542 CCL15Q16663 113 aa24.16■■□□□ 1.46
DDX39A-207ENST00000588542 CERKLQ49MI3 558 aaPredicted RBP24.16■■□□□ 1.46
DDX39A-207ENST00000588542 IFNL1Q8IU54 200 aa24.16■■□□□ 1.46
DDX39A-207ENST00000588542 NACAP1Q9BZK3 213 aa24.16■■□□□ 1.46
DDX39A-207ENST00000588542 GINM1Q9NU53 330 aa24.16■■□□□ 1.46
DDX39A-207ENST00000588542 USP17L5A8MUK1 530 aa24.15■■□□□ 1.46
DDX39A-207ENST00000588542 MINDY4BA8MYZ0 360 aa24.15■■□□□ 1.46
DDX39A-207ENST00000588542 CXCL11O14625 94 aa24.15■■□□□ 1.46
DDX39A-207ENST00000588542 CA12O43570 354 aa24.15■■□□□ 1.46
DDX39A-207ENST00000588542 TRPA1O75762 1119 aa24.15■■□□□ 1.46
DDX39A-207ENST00000588542 GH2P01242 217 aa24.15■■□□□ 1.46
DDX39A-207ENST00000588542 CDK8P49336 464 aa24.15■■□□□ 1.46
DDX39A-207ENST00000588542 MOGSQ13724 837 aa24.15■■□□□ 1.46
DDX39A-207ENST00000588542 SAGE1Q9NXZ1 904 aa24.15■■□□□ 1.46
DDX39A-207ENST00000588542 TSKSQ9UJT2 592 aa24.15■■□□□ 1.46
DDX39A-207ENST00000588542 LOC285556D6RIA3 1793 aa24.15■■□□□ 1.46
DDX39A-207ENST00000588542 GREB1LQ9C091 1923 aaPredicted RBP24.14■■□□□ 1.46
DDX39A-207ENST00000588542 HSPD1P10809 573 aaKnown RBP24.14■■□□□ 1.45
DDX39A-207ENST00000588542 HSPA8P11142 646 aaKnown RBP24.14■■□□□ 1.45
DDX39A-207ENST00000588542 CETPP11597 493 aa24.14■■□□□ 1.45
DDX39A-207ENST00000588542 ALX1Q15699 326 aa24.14■■□□□ 1.45
DDX39A-207ENST00000588542 NAPBQ9H115 298 aa24.14■■□□□ 1.45
DDX39A-207ENST00000588542 IL25Q9H293 177 aa24.14■■□□□ 1.45
DDX39A-207ENST00000588542 CHMLP26374 656 aa24.13■■□□□ 1.45
DDX39A-207ENST00000588542 ABCB5Q2M3G0 1257 aa24.13■■□□□ 1.45
DDX39A-207ENST00000588542 TBC1D2Q9BYX2 928 aa24.13■■□□□ 1.45
DDX39A-207ENST00000588542 LAMA4Q16363 1823 aa24.12■■□□□ 1.45
DDX39A-207ENST00000588542 A0A0G2JLL6 359 aaPredicted RBP24.12■■□□□ 1.45
DDX39A-207ENST00000588542 TRIM75PA6NK02 468 aa24.12■■□□□ 1.45
DDX39A-207ENST00000588542 GUCY1A2P33402 732 aa24.12■■□□□ 1.45
DDX39A-207ENST00000588542 CTCFP49711 727 aaPredicted RBP24.12■■□□□ 1.45
DDX39A-207ENST00000588542 PRRT2Q7Z6L0 340 aaPredicted RBP24.12■■□□□ 1.45
DDX39A-207ENST00000588542 FAM43AQ8N2R8 423 aa24.12■■□□□ 1.45
DDX39A-207ENST00000588542 ZNF280CQ8ND82 737 aa24.12■■□□□ 1.45
DDX39A-207ENST00000588542 WDR18Q9BV38 432 aa24.12■■□□□ 1.45
DDX39A-207ENST00000588542 CASP8AP2Q9UKL3 1982 aa24.11■■□□□ 1.45
DDX39A-207ENST00000588542 BTBD19C9JJ37 291 aa24.11■■□□□ 1.45
DDX39A-207ENST00000588542 FGAP02671 866 aa24.11■■□□□ 1.45
DDX39A-207ENST00000588542 MFAP1P55081 439 aaKnown RBP24.11■■□□□ 1.45
DDX39A-207ENST00000588542 SPP2Q13103 211 aa24.11■■□□□ 1.45
DDX39A-207ENST00000588542 BMP2KLQ5H9B9 411 aa24.11■■□□□ 1.45
DDX39A-207ENST00000588542 ZMYM6O95789 1325 aa24.1■■□□□ 1.45
DDX39A-207ENST00000588542 ALDH1A1P00352 501 aa24.1■■□□□ 1.45
DDX39A-207ENST00000588542 PPARAQ07869 468 aa24.1■■□□□ 1.45
DDX39A-207ENST00000588542 STK11IPQ8N1F8 1099 aa24.1■■□□□ 1.45
DDX39A-207ENST00000588542 CFHR5Q9BXR6 569 aa24.1■■□□□ 1.45
DDX39A-207ENST00000588542 R3HDMLQ9H3Y0 253 aa24.1■■□□□ 1.45
DDX39A-207ENST00000588542 AS3MTQ9HBK9 375 aa24.1■■□□□ 1.45
DDX39A-207ENST00000588542 TBC1D8O95759 1140 aa24.09■■□□□ 1.45
DDX39A-207ENST00000588542 AKR1B1P15121 316 aa24.09■■□□□ 1.45
DDX39A-207ENST00000588542 LBX1P52954 281 aa24.09■■□□□ 1.45
DDX39A-207ENST00000588542 OTUD7BQ6GQQ9 843 aa24.09■■□□□ 1.45
DDX39A-207ENST00000588542 GPAT2Q6NUI2 795 aa24.09■■□□□ 1.45
DDX39A-207ENST00000588542 CABP5Q9NP86 173 aa24.09■■□□□ 1.45
DDX39A-207ENST00000588542 RASA1P20936 1047 aa24.08■■□□□ 1.45
DDX39A-207ENST00000588542 SEPT2Q15019 361 aa24.08■■□□□ 1.45
DDX39A-207ENST00000588542 RAB3GAP1Q15042 981 aa24.08■■□□□ 1.45
DDX39A-207ENST00000588542 SH3D19Q5HYK7 790 aa24.08■■□□□ 1.45
DDX39A-207ENST00000588542 CCDC17Q96LX7 622 aa24.08■■□□□ 1.45
DDX39A-207ENST00000588542 ANAPC4Q9UJX5 808 aa24.08■■□□□ 1.45
DDX39A-207ENST00000588542 RAD50Q92878 1312 aa24.08■■□□□ 1.44
DDX39A-207ENST00000588542 MPHOSPH10O00566 681 aaKnown RBP24.07■■□□□ 1.44
DDX39A-207ENST00000588542 DGKZQ13574 1117 aa24.07■■□□□ 1.44
DDX39A-207ENST00000588542 TMEM179Q6ZVK1 233 aa24.07■■□□□ 1.44
DDX39A-207ENST00000588542 ANKRD23Q86SG2 305 aa24.07■■□□□ 1.44
DDX39A-207ENST00000588542 ZCCHC17Q9NP64 241 aaKnown RBP24.07■■□□□ 1.44
DDX39A-207ENST00000588542 TACC3Q9Y6A5 838 aa24.07■■□□□ 1.44
DDX39A-207ENST00000588542 HMGCS2P54868 508 aa24.06■■□□□ 1.44
DDX39A-207ENST00000588542 BACE1P56817 501 aa24.06■■□□□ 1.44
DDX39A-207ENST00000588542 CTDSPL2Q05D32 466 aa24.06■■□□□ 1.44
DDX39A-207ENST00000588542 MTMR2Q13614 643 aa24.06■■□□□ 1.44
DDX39A-207ENST00000588542 GADL1Q6ZQY3 521 aa24.06■■□□□ 1.44
DDX39A-207ENST00000588542 FASTKD5Q7L8L6 764 aaKnown RBP24.06■■□□□ 1.44
DDX39A-207ENST00000588542 RUFY2Q8WXA3 655 aa24.06■■□□□ 1.44
DDX39A-207ENST00000588542 MKNK2Q9HBH9 465 aa24.06■■□□□ 1.44
DDX39A-207ENST00000588542 PRDM1O75626 825 aa24.05■■□□□ 1.44
DDX39A-207ENST00000588542 CRHR2Q13324 411 aa24.05■■□□□ 1.44
DDX39A-207ENST00000588542 PROCA1Q8NCQ7 364 aaPredicted RBP24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms