RNA–Protein interactions for RNA: ENST00000588459.1

RPRD1A-206, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 4

Gene RPRD1A, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-206ENST00000588459 TTC6Q86TZ1 520 aa16.59■□□□□ 0.25
RPRD1A-206ENST00000588459 TBC1D2Q9BYX2 928 aa16.59■□□□□ 0.25
RPRD1A-206ENST00000588459 EHD4Q9H223 541 aa16.59■□□□□ 0.25
RPRD1A-206ENST00000588459 MCM9Q9NXL9 1143 aa16.59■□□□□ 0.25
RPRD1A-206ENST00000588459 PTCH2Q9Y6C5 1203 aa16.59■□□□□ 0.25
RPRD1A-206ENST00000588459 GH2P01242 217 aa16.58■□□□□ 0.24
RPRD1A-206ENST00000588459 CYP2D6P10635 497 aa16.58■□□□□ 0.24
RPRD1A-206ENST00000588459 BCRP11274 1271 aa16.58■□□□□ 0.24
RPRD1A-206ENST00000588459 PSMC4P43686 418 aa16.58■□□□□ 0.24
RPRD1A-206ENST00000588459 MTMR2Q13614 643 aa16.58■□□□□ 0.24
RPRD1A-206ENST00000588459 PROCA1Q8NCQ7 364 aaPredicted RBP16.58■□□□□ 0.24
RPRD1A-206ENST00000588459 OTUD7AQ8TE49 926 aaPredicted RBP16.58■□□□□ 0.24
RPRD1A-206ENST00000588459 DCP1AQ9NPI6 582 aaPredicted RBP16.58■□□□□ 0.24
RPRD1A-206ENST00000588459 SLC45A1Q9Y2W3 748 aa16.58■□□□□ 0.24
RPRD1A-206ENST00000588459 MGAMO43451 1857 aa16.58■□□□□ 0.24
RPRD1A-206ENST00000588459 TNRC18O15417 2968 aaPredicted RBP16.58■□□□□ 0.24
RPRD1A-206ENST00000588459 MLLT1Q03111 559 aaPredicted RBP16.57■□□□□ 0.24
RPRD1A-206ENST00000588459 UBE3CQ15386 1083 aa16.57■□□□□ 0.24
RPRD1A-206ENST00000588459 TATDN1Q6P1N9 297 aa16.57■□□□□ 0.24
RPRD1A-206ENST00000588459 SMCR8Q8TEV9 937 aaPredicted RBP16.57■□□□□ 0.24
RPRD1A-206ENST00000588459 TRIM47Q96LD4 638 aa16.57■□□□□ 0.24
RPRD1A-206ENST00000588459 WDR18Q9BV38 432 aa16.57■□□□□ 0.24
RPRD1A-206ENST00000588459 FMNL1O95466 1100 aaPredicted RBP16.56■□□□□ 0.24
RPRD1A-206ENST00000588459 SHMT1P34896 483 aa16.56■□□□□ 0.24
RPRD1A-206ENST00000588459 CERKLQ49MI3 558 aaPredicted RBP16.56■□□□□ 0.24
RPRD1A-206ENST00000588459 SH3D19Q5HYK7 790 aa16.56■□□□□ 0.24
RPRD1A-206ENST00000588459 ZSCAN25Q6NSZ9 544 aa16.56■□□□□ 0.24
RPRD1A-206ENST00000588459 PUS7LQ9H0K6 701 aaKnown RBP16.56■□□□□ 0.24
RPRD1A-206ENST00000588459 MYH8P13535 1937 aa16.56■□□□□ 0.24
RPRD1A-206ENST00000588459 BRCA2P51587 3418 aa16.56■□□□□ 0.24
RPRD1A-206ENST00000588459 BACE1P56817 501 aa16.55■□□□□ 0.24
RPRD1A-206ENST00000588459 RAB3GAP1Q15042 981 aa16.55■□□□□ 0.24
RPRD1A-206ENST00000588459 ABCB5Q2M3G0 1257 aa16.55■□□□□ 0.24
RPRD1A-206ENST00000588459 KBTBD3Q8NAB2 608 aa16.55■□□□□ 0.24
RPRD1A-206ENST00000588459 GINM1Q9NU53 330 aa16.55■□□□□ 0.24
RPRD1A-206ENST00000588459 TMOD4Q9NZQ9 345 aa16.55■□□□□ 0.24
RPRD1A-206ENST00000588459 PNMA3Q9UL41 463 aa16.55■□□□□ 0.24
RPRD1A-206ENST00000588459 TTC41PQ6P2S7 1318 aa16.54■□□□□ 0.24
RPRD1A-206ENST00000588459 CYP2D7A0A087X1C5 515 aa16.54■□□□□ 0.24
RPRD1A-206ENST00000588459 USP17L10C9JJH3 530 aa16.54■□□□□ 0.24
RPRD1A-206ENST00000588459 OSBPP22059 807 aa16.54■□□□□ 0.24
RPRD1A-206ENST00000588459 GABPAQ06546 454 aa16.54■□□□□ 0.24
RPRD1A-206ENST00000588459 ZYXQ15942 572 aaKnown RBP16.54■□□□□ 0.24
RPRD1A-206ENST00000588459 SLC9C1Q4G0N8 1177 aa16.54■□□□□ 0.24
RPRD1A-206ENST00000588459 ANKRD45Q5TZF3 282 aa16.54■□□□□ 0.24
RPRD1A-206ENST00000588459 ANKRD13CQ8N6S4 541 aa16.54■□□□□ 0.24
RPRD1A-206ENST00000588459 SLC44A5Q8NCS7 719 aa16.54■□□□□ 0.24
RPRD1A-206ENST00000588459 PI4K2BQ8TCG2 481 aa16.54■□□□□ 0.24
RPRD1A-206ENST00000588459 ARMC5Q96C12 935 aa16.54■□□□□ 0.24
RPRD1A-206ENST00000588459 DYNLL2Q96FJ2 89 aa16.54■□□□□ 0.24
RPRD1A-206ENST00000588459 ASCC2Q9H1I8 757 aaPredicted RBP16.54■□□□□ 0.24
RPRD1A-206ENST00000588459 ATP8A2Q9NTI2 1148 aa16.54■□□□□ 0.24
RPRD1A-206ENST00000588459 SLC4A4Q9Y6R1 1079 aa16.54■□□□□ 0.24
RPRD1A-206ENST00000588459 MYPNQ86TC9 1320 aa16.53■□□□□ 0.24
RPRD1A-206ENST00000588459 SMIM22K7EJ46 135 aa16.53■□□□□ 0.24
RPRD1A-206ENST00000588459 GNRH1P01148 92 aa16.53■□□□□ 0.24
RPRD1A-206ENST00000588459 FCGRTP55899 365 aa16.53■□□□□ 0.24
RPRD1A-206ENST00000588459 PABPC4Q13310 644 aaKnown RBP eCLIP16.53■□□□□ 0.24
RPRD1A-206ENST00000588459 SH3TC2Q8TF17 1288 aa16.53■□□□□ 0.24
RPRD1A-206ENST00000588459 FEZ1Q99689 392 aa16.53■□□□□ 0.24
RPRD1A-206ENST00000588459 CABP5Q9NP86 173 aa16.53■□□□□ 0.24
RPRD1A-206ENST00000588459 ZBTB47Q9UFB7 747 aaPredicted RBP16.53■□□□□ 0.24
RPRD1A-206ENST00000588459 SRRDQ9UH36 339 aa16.53■□□□□ 0.24
RPRD1A-206ENST00000588459 POTEFA5A3E0 1075 aa16.52■□□□□ 0.24
RPRD1A-206ENST00000588459 C19orf81C9J6K1 198 aa16.52■□□□□ 0.24
RPRD1A-206ENST00000588459 MPHOSPH10O00566 681 aaKnown RBP16.52■□□□□ 0.24
RPRD1A-206ENST00000588459 ERC2O15083 957 aa16.52■□□□□ 0.24
RPRD1A-206ENST00000588459 MYCP01106 439 aaPredicted RBP16.52■□□□□ 0.24
RPRD1A-206ENST00000588459 MX1P20591 662 aa16.52■□□□□ 0.24
RPRD1A-206ENST00000588459 IRX3P78415 501 aaPredicted RBP16.52■□□□□ 0.24
RPRD1A-206ENST00000588459 HDAC1Q13547 482 aaPredicted RBP16.52■□□□□ 0.24
RPRD1A-206ENST00000588459 EXOC6Q8TAG9 804 aa16.52■□□□□ 0.24
RPRD1A-206ENST00000588459 OSBP2Q969R2 916 aa16.52■□□□□ 0.24
RPRD1A-206ENST00000588459 ZNF333Q96JL9 665 aa16.52■□□□□ 0.24
RPRD1A-206ENST00000588459 EMILIN3Q9NT22 766 aa16.52■□□□□ 0.24
RPRD1A-206ENST00000588459 RBBP6Q7Z6E9 1792 aaKnown RBP16.51■□□□□ 0.23
RPRD1A-206ENST00000588459 SALL3Q9BXA9 1300 aa16.51■□□□□ 0.23
RPRD1A-206ENST00000588459 USP17L12C9JPN9 530 aa16.51■□□□□ 0.23
RPRD1A-206ENST00000588459 USP17L21D6R901 530 aa16.51■□□□□ 0.23
RPRD1A-206ENST00000588459 RNF113AO15541 343 aaKnown RBP16.51■□□□□ 0.23
RPRD1A-206ENST00000588459 GLRX3O76003 335 aaKnown RBP16.51■□□□□ 0.23
RPRD1A-206ENST00000588459 HOXD10P28358 340 aa16.51■□□□□ 0.23
RPRD1A-206ENST00000588459 GUCY1A2P33402 732 aa16.51■□□□□ 0.23
RPRD1A-206ENST00000588459 PRMT2P55345 433 aa16.51■□□□□ 0.23
RPRD1A-206ENST00000588459 PRKCZQ05513 592 aa16.51■□□□□ 0.23
RPRD1A-206ENST00000588459 SEPT2Q15019 361 aa16.51■□□□□ 0.23
RPRD1A-206ENST00000588459 FAM110CQ1W6H9 321 aa16.51■□□□□ 0.23
RPRD1A-206ENST00000588459 USP17L2Q6R6M4 530 aa16.51■□□□□ 0.23
RPRD1A-206ENST00000588459 RAET1EQ8TD07 263 aa16.51■□□□□ 0.23
RPRD1A-206ENST00000588459 ACER1Q8TDN7 264 aa16.51■□□□□ 0.23
RPRD1A-206ENST00000588459 APPBP2Q92624 585 aa16.51■□□□□ 0.23
RPRD1A-206ENST00000588459 GCC1Q96CN9 775 aa16.51■□□□□ 0.23
RPRD1A-206ENST00000588459 GABRQQ9UN88 632 aa16.51■□□□□ 0.23
RPRD1A-206ENST00000588459 KIAA0100Q14667 2235 aaKnown RBP16.51■□□□□ 0.23
RPRD1A-206ENST00000588459 M0R2C6 588 aa16.5■□□□□ 0.23
RPRD1A-206ENST00000588459 TNPO2O14787 897 aaKnown RBP16.5■□□□□ 0.23
RPRD1A-206ENST00000588459 PEX10O60683 326 aa16.5■□□□□ 0.23
RPRD1A-206ENST00000588459 C12orf60Q5U649 245 aa16.5■□□□□ 0.23
RPRD1A-206ENST00000588459 NBPF11Q86T75 865 aa16.5■□□□□ 0.23
RPRD1A-206ENST00000588459 AMOTL1Q8IY63 956 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms