RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 CERKLQ49MI3 558 aaPredicted RBP12.12□□□□□ -0.47
TPM4-207ENST00000588032 C12orf60Q5U649 245 aa12.12□□□□□ -0.47
TPM4-207ENST00000588032 PRRT2Q7Z6L0 340 aaPredicted RBP12.12□□□□□ -0.47
TPM4-207ENST00000588032 FAM43AQ8N2R8 423 aa12.12□□□□□ -0.47
TPM4-207ENST00000588032 WDR18Q9BV38 432 aa12.12□□□□□ -0.47
TPM4-207ENST00000588032 NACAP1Q9BZK3 213 aa12.12□□□□□ -0.47
TPM4-207ENST00000588032 CABP5Q9NP86 173 aa12.12□□□□□ -0.47
TPM4-207ENST00000588032 ARPP21Q9UBL0 812 aaPredicted RBP12.12□□□□□ -0.47
TPM4-207ENST00000588032 SLC45A1Q9Y2W3 748 aa12.12□□□□□ -0.47
TPM4-207ENST00000588032 CDK5RAP2Q96SN8 1893 aa12.11□□□□□ -0.47
TPM4-207ENST00000588032 GSG1L2A8MUP6 293 aa12.11□□□□□ -0.47
TPM4-207ENST00000588032 TRIM6-TRIM34B2RNG4 842 aa12.11□□□□□ -0.47
TPM4-207ENST00000588032 C19orf81C9J6K1 198 aa12.11□□□□□ -0.47
TPM4-207ENST00000588032 FKTNO75072 461 aa12.11□□□□□ -0.47
TPM4-207ENST00000588032 SPP2Q13103 211 aa12.11□□□□□ -0.47
TPM4-207ENST00000588032 CRHR2Q13324 411 aa12.11□□□□□ -0.47
TPM4-207ENST00000588032 TAF1CQ15572 869 aaPredicted RBP12.11□□□□□ -0.47
TPM4-207ENST00000588032 SLC4A8Q2Y0W8 1093 aa12.11□□□□□ -0.47
TPM4-207ENST00000588032 SBK1Q52WX2 424 aa12.11□□□□□ -0.47
TPM4-207ENST00000588032 CTR9Q6PD62 1173 aa12.11□□□□□ -0.47
TPM4-207ENST00000588032 TNS4Q8IZW8 715 aa12.11□□□□□ -0.47
TPM4-207ENST00000588032 HELLSQ9NRZ9 838 aa12.11□□□□□ -0.47
TPM4-207ENST00000588032 TRIM75PA6NK02 468 aa12.1□□□□□ -0.47
TPM4-207ENST00000588032 M0R2C6 588 aa12.1□□□□□ -0.47
TPM4-207ENST00000588032 PDHXO00330 501 aa12.1□□□□□ -0.47
TPM4-207ENST00000588032 TLR2O60603 784 aa12.1□□□□□ -0.47
TPM4-207ENST00000588032 APPP05067 770 aa12.1□□□□□ -0.47
TPM4-207ENST00000588032 SHMT1P34896 483 aa12.1□□□□□ -0.47
TPM4-207ENST00000588032 MOGSQ13724 837 aa12.1□□□□□ -0.47
TPM4-207ENST00000588032 ABCB5Q2M3G0 1257 aa12.1□□□□□ -0.47
TPM4-207ENST00000588032 SH3D19Q5HYK7 790 aa12.1□□□□□ -0.47
TPM4-207ENST00000588032 PROCA1Q8NCQ7 364 aaPredicted RBP12.1□□□□□ -0.47
TPM4-207ENST00000588032 ZNF296Q8WUU4 475 aaPredicted RBP12.1□□□□□ -0.47
TPM4-207ENST00000588032 RILPL2Q969X0 211 aa12.1□□□□□ -0.47
TPM4-207ENST00000588032 CCDC17Q96LX7 622 aa12.1□□□□□ -0.47
TPM4-207ENST00000588032 ZBTB21Q9ULJ3 1066 aa12.1□□□□□ -0.47
TPM4-207ENST00000588032 MYH1P12882 1939 aa12.09□□□□□ -0.47
TPM4-207ENST00000588032 MYH7P12883 1935 aa12.09□□□□□ -0.47
TPM4-207ENST00000588032 DOCK1Q14185 1865 aa12.09□□□□□ -0.47
TPM4-207ENST00000588032 USP17L10C9JJH3 530 aa12.09□□□□□ -0.47
TPM4-207ENST00000588032 HIP1O00291 1037 aa12.09□□□□□ -0.47
TPM4-207ENST00000588032 GDF11O95390 407 aa12.09□□□□□ -0.47
TPM4-207ENST00000588032 GH2P01242 217 aa12.09□□□□□ -0.47
TPM4-207ENST00000588032 BACE1P56817 501 aa12.09□□□□□ -0.47
TPM4-207ENST00000588032 PABPC4Q13310 644 aaKnown RBP eCLIP12.09□□□□□ -0.472e-7■■■□□ 18.3
TPM4-207ENST00000588032 ARHGEF6Q15052 776 aa12.09□□□□□ -0.47
TPM4-207ENST00000588032 PKN2Q16513 984 aaKnown RBP12.09□□□□□ -0.47
TPM4-207ENST00000588032 MCMDC2Q4G0Z9 681 aa12.09□□□□□ -0.47
TPM4-207ENST00000588032 GPAT2Q6NUI2 795 aa12.09□□□□□ -0.47
TPM4-207ENST00000588032 IFNL3Q8IZI9 196 aa12.09□□□□□ -0.47
TPM4-207ENST00000588032 SEC62Q99442 399 aaKnown RBP12.09□□□□□ -0.47
TPM4-207ENST00000588032 PARK7Q99497 189 aaKnown RBP12.09□□□□□ -0.47
TPM4-207ENST00000588032 R3HDMLQ9H3Y0 253 aa12.09□□□□□ -0.47
TPM4-207ENST00000588032 ZNF287Q9HBT7 754 aa12.09□□□□□ -0.47
TPM4-207ENST00000588032 AGTPBP1Q9UPW5 1226 aa12.09□□□□□ -0.47
TPM4-207ENST00000588032 NEFLP07196 543 aa12.08□□□□□ -0.48
TPM4-207ENST00000588032 CENPBP07199 599 aaPredicted RBP12.08□□□□□ -0.48
TPM4-207ENST00000588032 CYP2D6P10635 497 aa12.08□□□□□ -0.48
TPM4-207ENST00000588032 SDSP20132 328 aa12.08□□□□□ -0.48
TPM4-207ENST00000588032 TDO2P48775 406 aa12.08□□□□□ -0.48
TPM4-207ENST00000588032 CDK8P49336 464 aa12.08□□□□□ -0.48
TPM4-207ENST00000588032 MFAP1P55081 439 aaKnown RBP12.08□□□□□ -0.48
TPM4-207ENST00000588032 JAG1P78504 1218 aa12.08□□□□□ -0.48
TPM4-207ENST00000588032 SP3Q02447 781 aa12.08□□□□□ -0.48
TPM4-207ENST00000588032 GADL1Q6ZQY3 521 aa12.08□□□□□ -0.48
TPM4-207ENST00000588032 TMEM179Q6ZVK1 233 aa12.08□□□□□ -0.48
TPM4-207ENST00000588032 C16orf86Q6ZW13 317 aa12.08□□□□□ -0.48
TPM4-207ENST00000588032 CENPQQ7L2Z9 268 aaPredicted RBP12.08□□□□□ -0.48
TPM4-207ENST00000588032 CTU1Q7Z7A3 348 aaKnown RBP12.08□□□□□ -0.48
TPM4-207ENST00000588032 ERO1AQ96HE7 468 aa12.08□□□□□ -0.48
TPM4-207ENST00000588032 TMOD4Q9NZQ9 345 aa12.08□□□□□ -0.48
TPM4-207ENST00000588032 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.08□□□□□ -0.48
TPM4-207ENST00000588032 PNMA3Q9UL41 463 aa12.08□□□□□ -0.48
TPM4-207ENST00000588032 SIPA1L1O43166 1804 aa12.08□□□□□ -0.48
TPM4-207ENST00000588032 SLC3A2P08195 630 aaKnown RBP12.07□□□□□ -0.48
TPM4-207ENST00000588032 PDE4AP27815 886 aa12.07□□□□□ -0.48
TPM4-207ENST00000588032 USP14P54578 494 aa12.07□□□□□ -0.48
TPM4-207ENST00000588032 HMGCS2P54868 508 aa12.07□□□□□ -0.48
TPM4-207ENST00000588032 DGKZQ13574 1117 aa12.07□□□□□ -0.48
TPM4-207ENST00000588032 MTMR2Q13614 643 aa12.07□□□□□ -0.48
TPM4-207ENST00000588032 RAB3GAP1Q15042 981 aa12.07□□□□□ -0.48
TPM4-207ENST00000588032 CCDC84Q86UT8 332 aaPredicted RBP12.07□□□□□ -0.48
TPM4-207ENST00000588032 DYNLL2Q96FJ2 89 aa12.07□□□□□ -0.48
TPM4-207ENST00000588032 NAPBQ9H115 298 aa12.07□□□□□ -0.48
TPM4-207ENST00000588032 NAV1Q8NEY1 1877 aa12.06□□□□□ -0.48
TPM4-207ENST00000588032 DDX60LQ5H9U9 1706 aaKnown RBP12.06□□□□□ -0.48
TPM4-207ENST00000588032 CYP2D7A0A087X1C5 515 aa12.06□□□□□ -0.48
TPM4-207ENST00000588032 MINDY4BA8MYZ0 360 aa12.06□□□□□ -0.48
TPM4-207ENST00000588032 MPHOSPH10O00566 681 aaKnown RBP12.06□□□□□ -0.48
TPM4-207ENST00000588032 OSBPP22059 807 aa12.06□□□□□ -0.48
TPM4-207ENST00000588032 KIF22Q14807 665 aa12.06□□□□□ -0.48
TPM4-207ENST00000588032 ALX1Q15699 326 aa12.06□□□□□ -0.48
TPM4-207ENST00000588032 TTC22Q5TAA0 569 aa12.06□□□□□ -0.48
TPM4-207ENST00000588032 USP17L2Q6R6M4 530 aa12.06□□□□□ -0.48
TPM4-207ENST00000588032 C17orf99Q6UX52 265 aa12.06□□□□□ -0.48
TPM4-207ENST00000588032 SLC44A5Q8NCS7 719 aa12.06□□□□□ -0.48
TPM4-207ENST00000588032 KIAA1683Q9H0B3 1180 aa12.06□□□□□ -0.48
TPM4-207ENST00000588032 MKNK2Q9HBH9 465 aa12.06□□□□□ -0.48
TPM4-207ENST00000588032 EPB41L4AQ9HCS5 686 aaPredicted RBP12.06□□□□□ -0.48
TPM4-207ENST00000588032 ROBO3Q96MS0 1386 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms