RNA–Protein interactions for RNA: ENST00000587223.1

NPC1-206, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-206ENST00000587223 PTPRAP18433 802 aa7.82□□□□□ -1.16
NPC1-206ENST00000587223 GJA5P36382 358 aa7.82□□□□□ -1.16
NPC1-206ENST00000587223 TM4SF4P48230 202 aa7.82□□□□□ -1.16
NPC1-206ENST00000587223 GTF2A2P52657 109 aa7.82□□□□□ -1.16
NPC1-206ENST00000587223 SREBF2Q12772 1141 aa7.82□□□□□ -1.16
NPC1-206ENST00000587223 PPIL2Q13356 520 aa7.82□□□□□ -1.16
NPC1-206ENST00000587223 RRP1BQ14684 758 aaKnown RBP7.82□□□□□ -1.16
NPC1-206ENST00000587223 SBK1Q52WX2 424 aa7.82□□□□□ -1.16
NPC1-206ENST00000587223 OTUD7BQ6GQQ9 843 aa7.82□□□□□ -1.16
NPC1-206ENST00000587223 TATDN1Q6P1N9 297 aa7.82□□□□□ -1.16
NPC1-206ENST00000587223 STK11IPQ8N1F8 1099 aa7.82□□□□□ -1.16
NPC1-206ENST00000587223 RUFY2Q8WXA3 655 aa7.82□□□□□ -1.16
NPC1-206ENST00000587223 DYNLL2Q96FJ2 89 aa7.82□□□□□ -1.16
NPC1-206ENST00000587223 DNAJC18Q9H819 358 aa7.82□□□□□ -1.16
NPC1-206ENST00000587223 CABP5Q9NP86 173 aa7.82□□□□□ -1.16
NPC1-206ENST00000587223 GINM1Q9NU53 330 aa7.82□□□□□ -1.16
NPC1-206ENST00000587223 WBP1LQ9NX94 342 aa7.82□□□□□ -1.16
NPC1-206ENST00000587223 TAOK2Q9UL54 1235 aa7.82□□□□□ -1.16
NPC1-206ENST00000587223 FOCADQ5VW36 1801 aa7.82□□□□□ -1.16
NPC1-206ENST00000587223 CCDC171Q6TFL3 1326 aa7.81□□□□□ -1.16
NPC1-206ENST00000587223 CCL15-CCL14A0A0B4J2E2 113 aa7.81□□□□□ -1.16
NPC1-206ENST00000587223 USP17L5A8MUK1 530 aa7.81□□□□□ -1.16
NPC1-206ENST00000587223 MPHOSPH10O00566 681 aaKnown RBP7.81□□□□□ -1.16
NPC1-206ENST00000587223 CXCL11O14625 94 aa7.81□□□□□ -1.16
NPC1-206ENST00000587223 GH2P01242 217 aa7.81□□□□□ -1.16
NPC1-206ENST00000587223 FGAP02671 866 aa7.81□□□□□ -1.16
NPC1-206ENST00000587223 HSPD1P10809 573 aaKnown RBP7.81□□□□□ -1.16
NPC1-206ENST00000587223 CETPP11597 493 aa7.81□□□□□ -1.16
NPC1-206ENST00000587223 CHMLP26374 656 aa7.81□□□□□ -1.16
NPC1-206ENST00000587223 SHMT1P34896 483 aa7.81□□□□□ -1.16
NPC1-206ENST00000587223 CDK8P49336 464 aa7.81□□□□□ -1.16
NPC1-206ENST00000587223 EVX2Q03828 476 aa7.81□□□□□ -1.16
NPC1-206ENST00000587223 GABPAQ06546 454 aa7.81□□□□□ -1.16
NPC1-206ENST00000587223 SNAPC2Q13487 334 aa7.81□□□□□ -1.16
NPC1-206ENST00000587223 ALX1Q15699 326 aa7.81□□□□□ -1.16
NPC1-206ENST00000587223 CCL15Q16663 113 aa7.81□□□□□ -1.16
NPC1-206ENST00000587223 ABCB5Q2M3G0 1257 aa7.81□□□□□ -1.16
NPC1-206ENST00000587223 BMP2KLQ5H9B9 411 aa7.81□□□□□ -1.16
NPC1-206ENST00000587223 VPS53Q5VIR6 699 aa7.81□□□□□ -1.16
NPC1-206ENST00000587223 ZNF589Q86UQ0 364 aaPredicted RBP7.81□□□□□ -1.16
NPC1-206ENST00000587223 SLC44A5Q8NCS7 719 aa7.81□□□□□ -1.16
NPC1-206ENST00000587223 MKNK2Q9HBH9 465 aa7.81□□□□□ -1.16
NPC1-206ENST00000587223 AS3MTQ9HBK9 375 aa7.81□□□□□ -1.16
NPC1-206ENST00000587223 ZNF287Q9HBT7 754 aa7.81□□□□□ -1.16
NPC1-206ENST00000587223 EPB41L4AQ9HCS5 686 aaPredicted RBP7.81□□□□□ -1.16
NPC1-206ENST00000587223 AFG3L2Q9Y4W6 797 aa7.81□□□□□ -1.16
NPC1-206ENST00000587223 BAZ2AQ9UIF9 1905 aaKnown RBP7.81□□□□□ -1.16
NPC1-206ENST00000587223 TESPA1A2RU30 521 aaPredicted RBP7.8□□□□□ -1.16
NPC1-206ENST00000587223 TRIM75PA6NK02 468 aa7.8□□□□□ -1.16
NPC1-206ENST00000587223 SMIM22K7EJ46 135 aa7.8□□□□□ -1.16
NPC1-206ENST00000587223 TRPA1O75762 1119 aa7.8□□□□□ -1.16
NPC1-206ENST00000587223 ALDH1A1P00352 501 aa7.8□□□□□ -1.16
NPC1-206ENST00000587223 HSPA1AP0DMV8 641 aaKnown RBP7.8□□□□□ -1.16
NPC1-206ENST00000587223 HSPA1BP0DMV9 641 aaKnown RBP7.8□□□□□ -1.16
NPC1-206ENST00000587223 PDE4BQ07343 736 aa7.8□□□□□ -1.16
NPC1-206ENST00000587223 PPARAQ07869 468 aa7.8□□□□□ -1.16
NPC1-206ENST00000587223 SPP2Q13103 211 aa7.8□□□□□ -1.16
NPC1-206ENST00000587223 RAB3GAP1Q15042 981 aa7.8□□□□□ -1.16
NPC1-206ENST00000587223 C16orf86Q6ZW13 317 aa7.8□□□□□ -1.16
NPC1-206ENST00000587223 CCDC84Q86UT8 332 aaPredicted RBP7.8□□□□□ -1.16
NPC1-206ENST00000587223 IFNL1Q8IU54 200 aa7.8□□□□□ -1.16
NPC1-206ENST00000587223 ZNF444Q8N0Y2 327 aaPredicted RBP7.8□□□□□ -1.16
NPC1-206ENST00000587223 ZNF280CQ8ND82 737 aa7.8□□□□□ -1.16
NPC1-206ENST00000587223 MS4A4AQ96JQ5 239 aa7.8□□□□□ -1.16
NPC1-206ENST00000587223 CCDC17Q96LX7 622 aa7.8□□□□□ -1.16
NPC1-206ENST00000587223 TBC1D2Q9BYX2 928 aa7.8□□□□□ -1.16
NPC1-206ENST00000587223 RNF186Q9NXI6 227 aa7.8□□□□□ -1.16
NPC1-206ENST00000587223 ZBTB21Q9ULJ3 1066 aa7.8□□□□□ -1.16
NPC1-206ENST00000587223 NAV1Q8NEY1 1877 aa7.79□□□□□ -1.16
NPC1-206ENST00000587223 FOXP2O15409 715 aa7.79□□□□□ -1.16
NPC1-206ENST00000587223 CA12O43570 354 aa7.79□□□□□ -1.16
NPC1-206ENST00000587223 CTCFP49711 727 aaPredicted RBP7.79□□□□□ -1.16
NPC1-206ENST00000587223 JAG1P78504 1218 aa7.79□□□□□ -1.16
NPC1-206ENST00000587223 CTDSPL2Q05D32 466 aa7.79□□□□□ -1.16
NPC1-206ENST00000587223 SHROOM1Q2M3G4 852 aaPredicted RBP7.79□□□□□ -1.16
NPC1-206ENST00000587223 CASC1Q6TDU7 716 aa7.79□□□□□ -1.16
NPC1-206ENST00000587223 GADL1Q6ZQY3 521 aa7.79□□□□□ -1.16
NPC1-206ENST00000587223 KIAA1211Q6ZU35 1233 aa7.79□□□□□ -1.16
NPC1-206ENST00000587223 FASTKD5Q7L8L6 764 aaKnown RBP7.79□□□□□ -1.16
NPC1-206ENST00000587223 BRI3BPQ8WY22 251 aa7.79□□□□□ -1.16
NPC1-206ENST00000587223 WDR18Q9BV38 432 aa7.79□□□□□ -1.16
NPC1-206ENST00000587223 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.79□□□□□ -1.16
NPC1-206ENST00000587223 CTNNA3Q9UI47 895 aa7.79□□□□□ -1.16
NPC1-206ENST00000587223 KCNH4Q9UQ05 1017 aa7.79□□□□□ -1.16
NPC1-206ENST00000587223 A0A0G2JLL6 359 aaPredicted RBP7.78□□□□□ -1.16
NPC1-206ENST00000587223 C19orf81C9J6K1 198 aa7.78□□□□□ -1.16
NPC1-206ENST00000587223 USP17L10C9JJH3 530 aa7.78□□□□□ -1.16
NPC1-206ENST00000587223 IGF2BP3O00425 579 aaKnown RBP eCLIP7.78□□□□□ -1.16
NPC1-206ENST00000587223 ZNF213O14771 459 aa7.78□□□□□ -1.16
NPC1-206ENST00000587223 FOXN1O15353 648 aa7.78□□□□□ -1.16
NPC1-206ENST00000587223 SGSM2O43147 1006 aa7.78□□□□□ -1.16
NPC1-206ENST00000587223 PRDM1O75626 825 aa7.78□□□□□ -1.16
NPC1-206ENST00000587223 TBC1D8O95759 1140 aa7.78□□□□□ -1.16
NPC1-206ENST00000587223 AKR1B1P15121 316 aa7.78□□□□□ -1.16
NPC1-206ENST00000587223 BACE1P56817 501 aa7.78□□□□□ -1.16
NPC1-206ENST00000587223 HAND2P61296 217 aa7.78□□□□□ -1.16
NPC1-206ENST00000587223 ATP2B2Q01814 1243 aa7.78□□□□□ -1.16
NPC1-206ENST00000587223 SEPT2Q15019 361 aa7.78□□□□□ -1.16
NPC1-206ENST00000587223 TMEM179Q6ZVK1 233 aa7.78□□□□□ -1.16
NPC1-206ENST00000587223 PRRT2Q7Z6L0 340 aaPredicted RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms