RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-208ENST00000586548 DEXIO95424 95 aa25.87■■□□□ 1.73
CIRBP-208ENST00000586548 TROAPQ12815 778 aa25.87■■□□□ 1.73
CIRBP-208ENST00000586548 SLC4A8Q2Y0W8 1093 aa25.87■■□□□ 1.73
CIRBP-208ENST00000586548 CCDC178Q5BJE1 867 aa25.87■■□□□ 1.73
CIRBP-208ENST00000586548 DYNLL2Q96FJ2 89 aa25.87■■□□□ 1.73
CIRBP-208ENST00000586548 ZNF287Q9HBT7 754 aa25.87■■□□□ 1.73
CIRBP-208ENST00000586548 SNED1Q8TER0 1413 aa25.86■■□□□ 1.73
CIRBP-208ENST00000586548 MYH6P13533 1939 aa25.86■■□□□ 1.73
CIRBP-208ENST00000586548 PGBD1Q96JS3 809 aa25.86■■□□□ 1.73
CIRBP-208ENST00000586548 MKNK2Q9HBH9 465 aa25.86■■□□□ 1.73
CIRBP-208ENST00000586548 RTEL1Q9NZ71 1219 aa25.86■■□□□ 1.73
CIRBP-208ENST00000586548 SAP30BPQ9UHR5 308 aaKnown RBP25.86■■□□□ 1.73
CIRBP-208ENST00000586548 TTF2Q9UNY4 1162 aaKnown RBP25.86■■□□□ 1.73
CIRBP-208ENST00000586548 KIF28PB7ZC32 967 aa25.85■■□□□ 1.73
CIRBP-208ENST00000586548 PLCD1P51178 756 aa25.85■■□□□ 1.73
CIRBP-208ENST00000586548 FKBP1AP62942 108 aaKnown RBP25.85■■□□□ 1.73
CIRBP-208ENST00000586548 MYSM1Q5VVJ2 828 aa25.85■■□□□ 1.73
CIRBP-208ENST00000586548 SLC16A10Q8TF71 515 aa25.85■■□□□ 1.73
CIRBP-208ENST00000586548 RNF26Q9BY78 433 aaPredicted RBP25.85■■□□□ 1.73
CIRBP-208ENST00000586548 NMT2O60551 498 aa25.85■■□□□ 1.73
CIRBP-208ENST00000586548 TFAP4Q01664 338 aa25.85■■□□□ 1.73
CIRBP-208ENST00000586548 DBNDD1Q9H9R9 158 aa25.85■■□□□ 1.73
CIRBP-208ENST00000586548 TCP11L1Q9NUJ3 509 aa25.85■■□□□ 1.73
CIRBP-208ENST00000586548 ZNF646O15015 1829 aaPredicted RBP25.84■■□□□ 1.73
CIRBP-208ENST00000586548 CEBPZQ03701 1054 aaKnown RBP25.84■■□□□ 1.73
CIRBP-208ENST00000586548 HHIPL2Q6UWX4 724 aa25.84■■□□□ 1.73
CIRBP-208ENST00000586548 C16orf86Q6ZW13 317 aa25.84■■□□□ 1.73
CIRBP-208ENST00000586548 DGKHQ86XP1 1220 aa25.84■■□□□ 1.73
CIRBP-208ENST00000586548 ANKS1AQ92625 1134 aa25.84■■□□□ 1.73
CIRBP-208ENST00000586548 FTOQ9C0B1 505 aaKnown RBP eCLIP25.84■■□□□ 1.738e-7■□□□□ 9.3
CIRBP-208ENST00000586548 PDGFDQ9GZP0 370 aaPredicted RBP25.84■■□□□ 1.73
CIRBP-208ENST00000586548 F8W031 263 aaPredicted RBP25.83■■□□□ 1.73
CIRBP-208ENST00000586548 RCSD1Q6JBY9 416 aa25.83■■□□□ 1.73
CIRBP-208ENST00000586548 PANK2Q9BZ23 570 aa25.83■■□□□ 1.73
CIRBP-208ENST00000586548 TSPY26PQ9H489 355 aa25.83■■□□□ 1.73
CIRBP-208ENST00000586548 POLR3EQ9NVU0 708 aa25.83■■□□□ 1.73
CIRBP-208ENST00000586548 LIG1P18858 919 aa25.83■■□□□ 1.72
CIRBP-208ENST00000586548 STRIP1Q5VSL9 837 aa25.83■■□□□ 1.72
CIRBP-208ENST00000586548 ZNF444Q8N0Y2 327 aaPredicted RBP25.83■■□□□ 1.72
CIRBP-208ENST00000586548 SUPT20HQ8NEM7 779 aa25.83■■□□□ 1.72
CIRBP-208ENST00000586548 BICD2Q8TD16 824 aa25.83■■□□□ 1.72
CIRBP-208ENST00000586548 MXD3Q9BW11 206 aa25.83■■□□□ 1.72
CIRBP-208ENST00000586548 ZNF219Q9P2Y4 722 aaPredicted RBP25.83■■□□□ 1.72
CIRBP-208ENST00000586548 ECE2O60344 883 aa25.82■■□□□ 1.72
CIRBP-208ENST00000586548 YEATS4O95619 227 aa25.82■■□□□ 1.72
CIRBP-208ENST00000586548 U2AF2P26368 475 aaKnown RBP eCLIP25.82■■□□□ 1.72
CIRBP-208ENST00000586548 GUCY1A2P33402 732 aa25.82■■□□□ 1.72
CIRBP-208ENST00000586548 FUT2Q10981 343 aa25.82■■□□□ 1.72
CIRBP-208ENST00000586548 GRIPAP1Q4V328 841 aa25.82■■□□□ 1.72
CIRBP-208ENST00000586548 TEKT1Q969V4 418 aa25.82■■□□□ 1.72
CIRBP-208ENST00000586548 DDX19AQ9NUU7 478 aaKnown RBP25.82■■□□□ 1.72
CIRBP-208ENST00000586548 SCN9AQ15858 1988 aa25.81■■□□□ 1.72
CIRBP-208ENST00000586548 UBE2Q2LH0YL09 131 aa25.81■■□□□ 1.72
CIRBP-208ENST00000586548 TSPY3P0CV98 308 aa25.81■■□□□ 1.72
CIRBP-208ENST00000586548 TSPY8P0CW00 308 aa25.81■■□□□ 1.72
CIRBP-208ENST00000586548 RASA1P20936 1047 aa25.81■■□□□ 1.72
CIRBP-208ENST00000586548 NASPP49321 788 aaPredicted RBP25.81■■□□□ 1.72
CIRBP-208ENST00000586548 AKAP17AQ02040 695 aaKnown RBP25.81■■□□□ 1.72
CIRBP-208ENST00000586548 CMTR1Q8N1G2 835 aaKnown RBP25.81■■□□□ 1.72
CIRBP-208ENST00000586548 CTCFLQ8NI51 663 aaPredicted RBP25.81■■□□□ 1.72
CIRBP-208ENST00000586548 RBSNQ9H1K0 784 aa25.81■■□□□ 1.72
CIRBP-208ENST00000586548 IL17RBQ9NRM6 502 aa25.81■■□□□ 1.72
CIRBP-208ENST00000586548 PRPF3O43395 683 aaKnown RBP25.8■■□□□ 1.72
CIRBP-208ENST00000586548 CDK8P49336 464 aa25.8■■□□□ 1.72
CIRBP-208ENST00000586548 KIAA2012Q0VF49 1180 aa25.8■■□□□ 1.72
CIRBP-208ENST00000586548 GNL2Q13823 731 aaKnown RBP25.8■■□□□ 1.72
CIRBP-208ENST00000586548 TMTC3Q6ZXV5 915 aa25.8■■□□□ 1.72
CIRBP-208ENST00000586548 CCDC82Q8N4S0 544 aa25.8■■□□□ 1.72
CIRBP-208ENST00000586548 SLC44A5Q8NCS7 719 aa25.8■■□□□ 1.72
CIRBP-208ENST00000586548 MRIQ9BWK5 157 aa25.8■■□□□ 1.72
CIRBP-208ENST00000586548 KAT14Q9H8E8 782 aa25.8■■□□□ 1.72
CIRBP-208ENST00000586548 ADAMTSL1Q8N6G6 1762 aa25.8■■□□□ 1.72
CIRBP-208ENST00000586548 MMP1P03956 469 aa25.8■■□□□ 1.72
CIRBP-208ENST00000586548 MAP3K14Q99558 947 aa25.8■■□□□ 1.72
CIRBP-208ENST00000586548 PLEKHA8P1O95397 391 aa25.79■■□□□ 1.72
CIRBP-208ENST00000586548 SAFBQ15424 915 aaKnown RBP eCLIP25.79■■□□□ 1.72
CIRBP-208ENST00000586548 DACT2Q5SW24 774 aa25.79■■□□□ 1.72
CIRBP-208ENST00000586548 LINC00301Q8NCQ3 95 aa25.79■■□□□ 1.72
CIRBP-208ENST00000586548 KCNG4Q8TDN1 519 aa25.79■■□□□ 1.72
CIRBP-208ENST00000586548 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.79■■□□□ 1.72
CIRBP-208ENST00000586548 NUP62CLQ9H1M0 184 aa25.79■■□□□ 1.72
CIRBP-208ENST00000586548 KIF13BQ9NQT8 1826 aa25.78■■□□□ 1.72
CIRBP-208ENST00000586548 SCNN1DP51172 638 aa25.78■■□□□ 1.72
CIRBP-208ENST00000586548 DACT1Q9NYF0 836 aa25.78■■□□□ 1.72
CIRBP-208ENST00000586548 CLIC4Q9Y696 253 aa25.78■■□□□ 1.72
CIRBP-208ENST00000586548 USP17L3A6NCW0 530 aa25.77■■□□□ 1.72
CIRBP-208ENST00000586548 USP17L4A6NCW7 530 aa25.77■■□□□ 1.72
CIRBP-208ENST00000586548 WDHD1O75717 1129 aaPredicted RBP25.77■■□□□ 1.72
CIRBP-208ENST00000586548 KIF5BP33176 963 aa25.77■■□□□ 1.72
CIRBP-208ENST00000586548 HDLBPQ00341 1268 aaKnown RBP25.77■■□□□ 1.72
CIRBP-208ENST00000586548 STK38Q15208 465 aa25.77■■□□□ 1.72
CIRBP-208ENST00000586548 ANO1Q5XXA6 986 aa25.77■■□□□ 1.72
CIRBP-208ENST00000586548 USP17L1Q7RTZ2 530 aa25.77■■□□□ 1.72
CIRBP-208ENST00000586548 TTLL6Q8N841 843 aa25.77■■□□□ 1.72
CIRBP-208ENST00000586548 KCNQ5Q9NR82 932 aa25.77■■□□□ 1.72
CIRBP-208ENST00000586548 USP40Q9NVE5 1235 aa25.77■■□□□ 1.72
CIRBP-208ENST00000586548 CNTNAP5Q8WYK1 1306 aa25.77■■□□□ 1.72
CIRBP-208ENST00000586548 XBP1P17861 261 aa25.77■■□□□ 1.72
CIRBP-208ENST00000586548 CRKP46108 304 aa25.77■■□□□ 1.72
CIRBP-208ENST00000586548 ME1P48163 572 aa25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms